Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---        ---------->DOF2                                                                       -------    --------->ANAC58       <---------YAB1                                                  ----------    --------->ANAC58   <---------GLK1(2)                                                   <xxxxxxxxx  ---------->DOF2    <---------AHL20(1)                                                  <xxxxxxxxxxx ---ARR14(2)         --------->AHL20(2)                                                 --------->MYB52(1) -->ARR14(2)         <---------AHL20(2)                                             <---------ARR11(3) --CCA1(2)           --------->AHL20(1)                                         ---------->DOF2<----- ---TaMYB80    ----------->GT1                                             <---------TOE2(3)  ------- ->GLK1(1)     --------->TOE2(3)                      ---------->DOF2  --------->ATHB12<xxxxxxxxxxxxx --GLK1(1)     --------->YAB1                     ----------->RAV1(1)  --------->YAB1 <---------MYB59 ->TaMYB80    ----------->GT1                    <----------ID1       <---------YAB1--------->ARR11(3)   ccttgaaagcaaaagaatgttaataaattctcattacagagataatagaagacaacaaaagagaagatgagaatgataagattaaagacctaagtgacgc  16849100     <----------DOF2  --------->ANAC58  --------->ANAC58 ------>ANAC58 ------>ANAC58 -->ANAC58                                                                           <---------At4g35610 ->HVH21 <---------AtLEC2                                                            <---------ZAT14 xxxxxxxsmallRNA(s)                 --------->ANAC58                                 --------->At4g35610 xxxxxsmallRNA(s)                   --------->ANAC58                               <---------ZAT14 ----ZAT18                <----------DOF2         >>>>>>>>>TBF1                    --------->ZAT14 -->ANAC58  ----------->GT1    <---------AtLEC2>>>>>>>>>TBF1                  --------->At4g35610 xxxxxxxsmallRNA(se3)---------->DOF2--------->ANAC46 >>>>>>>>>TBF1     --------->TOE2(3) ----------->HVH21   actcacgctttgaatggaaaaaacaaagcttttgcatcacccaagagaagaagaagaagaatggtatttgtaatcttatcatctgtgtgctgtgaccagc  16849200                                         ----------->HVH21                                         <---------ETT(1)                           <---------ARR14(2)         --------->TOE1(3)     --------->ANAC58                     <---------ALFIN1--------->ARR14(2)         --------->TOE2(3)     --------->ANAC58               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       ------->TEIL       <---------DEAR3(1)              ------>ZmHOX2a(1)        <---------CCA1(2)   gtctctatgaaccttaacccatcaaacctcggctcgaaattgtccgacccattcgttttcctcgattcccaaacctgatcaattcatatccacatctcag  16849300                                                ---------->DOF2                                            ---------->DOF2                                       --------------->AGL15                                       <---------------AGL15                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    <---------ARR14(2)                                    --------->ARR14(3)                                    <---------ARR14(3)                                    --------->ARR11(3)                                    <---------ARR11(3)                                            <--       --------->ANAC46             <---------AGP1                                                ---     ----------->RAV1(1)            --------->ARR14(2)        <---------LBD16                     <--    --------->MYB46(3)              --------->AGP1----------->GT1                     <------ZmHOX2a(1)  --------->ANAC46                 <---------CCA1(2)       <----------DOF2 <------ZmHOX2a(1)      <--   tttcaaaccacagaacaattgaaatcgtcgaaatcgcagatcttaaaaaagaaagaaaaacctttggggagactggaggaagaatggaggaagaagagag  16849400                                                                                ------>ZmHOX2a(2)                                                                               --------->GLK1(1)                                                                               <---------GLK1(1)                                                                               <------ZmHOX2a(2)                                                                              --------->ARR14(2)                                                                              <---------ARR11(1)                                                                              <---------ARR11(3)                                                                              <-----------ARR10                                                                              <---------AGP1                                                                              <---------ARR14(2)                                                                             <---------CCA1(2)                                                                             <---------ARR14(1)                                                                            --------->LBD16                                                                          <---------LBD16                                                                         ------>NtERF2                                                                        --------->ANAC46        -----                                                                        --------->DEAR3(1)      -----                                                                        <---------DEAR3(1)    -------                                                                       --------->ATERF1(1)    -------                                                                      ------>NtERF2           -------           --------->ANAC58                                           <---------ATERF1(1)     -------           --------->ANAC58                                          <---------O2             -------          --------->RAP2.6(3)                                        ----------->HVH21     --------->AtMYB61          --------->ATERF1(1)                                     ----------->HVH21        <---------ALFIN1     --------->ALFIN1                                             --------->TOE1(2)        --------->DEAR3(1)   <---------MYB46(3)                                            --------->DEAR3(2)       <---------MYB55(2)  <---------DEAR3(1)                         --------->TOE1(3)  <------ZmHOX2a(2)         --------->MYB46(3) --------->At4g35610             <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->DEAR3(1) <---------ALFIN1 <---------At4g35610            --------->ANAC46               --------->ARR14(2)       --------->AtMYB61 -------At4g35610               <---------ALFIN1           <---------LBD16<------NtERF2 --------->DEAR3(1) ------>At4g35610             --------->AtMYB61         <<<<<<<<<TBF1--------->O2      --------->MYB46(3) -------ZAT14    ----------->HVH21           --------->TOE2(3) <---------ARR14(2)    <---------ALFIN1 -------ZAT2 <------NtERF2    <---------ALFIN1  --------->REM1(1)------>ZmHOX2a(2)   --------->ANAC46   agcagcggtggagacggcaatgacagaagcgaccacaccgcttgaaaccttcatcttcttcttcggatccgacgacgccggatctctccaccaccaccga  16849500                  ------>NtERF2          <---------ANAC58          <---------ANAC58      <---------At4g35610      <---------ZAT2      --------->At4g35610      --------->ZAT2<---------ANAC46 <---------LBD16 <---------ANAC58 ->MYB83  <---------ANAC46 ->MYB46(1)      <---------RAP2.6(2) -->DREB2C(2)    <---------ANAC46                                    <---------ZAT18         -------- -->DEAR3(1)     <---------ANAC58                                   <-----------GT1       --------->ANAC46 -->MYB46(3)--------->ALFIN1                                      <------------CBF   <-----------GT1 >GAMYB  <-------TEIL               --------->TOE2(3)        ------------>CBF    <---------AHL20(2) -->DEAR4(1)<-----------RAV1(1) <----------DOF2             --------->ANAC46 <----------DOF2 <-------   ctctctggagctgcgtgttgcgccttgtttcaggcttttcttaatatcaaattttcagttaaacccaatattgcccttcctttttattttctccaccatt  16849600                  --------------->AtSPL8        --------->AHL20(2)     <---------ICU4                  <----------ID1                         <-------TEIL    --------->AHL20(2)          --------->YAB1                              --------->ABI4(2)    <---------AHL20(2)          --------->AHL20(2)                    --------->MYB52(1)    <---------ATHB51    --------->ICU4           <-------GAMYB <---------YAB1    --------->ICU4<---------------AtSPL8        <---------ANAC58   --------->YAB1  --------->YAB1  --------------->AtSPL3        <---------ANAC46  <---------TOE2(3) ->AtMYB61  ---------->DOF2  --------->YAB1     <---------ANAC58  <---------YAB1                    - --ICU4 <---------AHL20(2) <---------YAB1  <------------CBF----------->GT1  <---------ZAT18<---------MYB46(3)   acaaaaataattaaaaaagagaagtacttattaataaaaaaaacaaattggcgttggaatgtggtattatcgtaacggtgcatttgattcgagttgttcg  16849700                           <------------CBF                                             <---------AHL20(1)                         --------->AHL20(1)                                             --------->ARR11(3)                         <---------AHL20(1)                                             <---------ARR11(3)                         --------->AHL20(2)                                       ----------->GT1                     --------->ATHB51                                         <---------AHL20(2)                     --------->AHL20(2)                                       <---------YAB1             --------->ATHB12                        --------->HSFB2a(2)     --------->AHL20(2)             <---------MYB46(3)                     <---------LBD16          --------->AHL20(1)            <---------ATHB12                 ------------>CBF                <---------AHL20(2)        <---------YAB1--------->AHL20(1)   <------MYB46(1)                   <---------AHL20(1)        ------------>CBF <---------AHL20(2)<------MYB83               --------->TOE2(3) --------->AHL20(1) -------->GLK1(2)    <---------AHL20(2)   <---------MYB46(3)  --------->YAB1--------->YAB1   ataatctattttcaatggttgaattattttattgactcatctagtgggtcaatttgtggaactatcaaattatctcaaatataatggaaaaatatttcaa  16849800                                                               <----------DOF2                                                         --------->YAB1                                                         <---------ICU4                                                     <---------YAB1                                                    --------->AHL20(2)                                                    <---------AHL20(2)                  --------->ZAT6                                                   --------->YAB1                      <---------YAB1                                                  <---------AHL20(2)            ------->GAMYB    ----                       <----------DOF2            <---------YAB1             --------->MYB52(1)<-----                  <-----------GT1              <---------ARR11(3) <---------ANAC58 <---------ANAC58          ----------->GT1                      --------->AHL20(1) <---------ANAC58 <---------ANAC58<- --------->AtLEC2<-----------GT1      <---------ATHB12--------->YAB1        <---------ATHB12   ------   accatacaaatttagttatttatctctttttttttgtccaataactcagtatattataatcaagactttcttggtccaataacgggcttatcactagtat  16849900                  ---------->DOF2                 ---------->DOF2               --------->AtMYB61         --------->ANAC58         --------->ANAC58                                                                        ----         --------->ANAC46                                                                       <----         --------->AtLEC2--------->ICU4                                                   <---------YAB1    <-----------GT1--------->DAG2                                                       <-----------GT1 ------->GT1   ------->GAMYB   <---------ANAC46           ----------->GT1            <---------ICU4 ----ZAT14    --------->MYB46(3)             ----------->GT1    <---------AHL20(2)  --------->ICU4 --------ZAT6--------->ANAC58  <---------ANAC58     --------->YAB1                 <---------ANAC55(2) --->ZAT14   --------->ANAC58  <---------ANAC58 <---------AHL20(2)                 --------->ANAC55(2)   agtattaaaccatgcaaccaaaaggccatttttgtgtgttattgaactagtaaattagaatagtattttaaaatccattgctattacttattaccattta  16850000  Previous    Next  AGI:  At5g42110.1    Description:  unknown protein Range:  from: 16849284    to: 16849454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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