Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ARR14(1)                                       --------->CCA1(2)                                       <------ZmHOX2a(2)                                      --------->ARR14(3)                                      --------->AGP1                                      <---------ARR14(2)                                      --------->ARR14(2)                                      --------->ARR11(3)                                      <---------ARR14(3)                                      <---------ARR11(3)                                      <---------AGP1                                  ---------->DOF2                             <-----------TGA1                             <-----------HVH21                            --------->bZIP60(1)                           <------NtERF2                                <---------ANAC46                          <---------RAP2.6(3)             --------->ANAC46                         --------->DEAR3(1)               --------->ANAC58       ====================                         --------->RAP2.3(2)            <---------ALFIN1--------->DEAR3(1)  ---------                        --------->DEAR3(2) <---------ANAC58         --------->ZAT14        <---------LBD16 ------TEIL            --------->At4g35610 <---------ANAC58   ----------->RAV1(1)<----------DOF2 --ZmHOX2a(1)          <---------At4g35610 <-----------------AGL1   <---------ABI4(2)     <---------LBD16 -MYB83              --------->ZAT18----------->ARR10 --------->RAP2.6(2)--------->LBD16<---------ARR14(2) -MYB46(1)  <---------ANAC58--------->O2------>ZmHOX2a(2) --------->ANAC58 <---------MYB46(3)<------NtERF2 -P         <---------ANAC58<---------bZIP60(1)    --------->ANAC46 <---------ZAT14  <---------AtLEC2   atacatccaagatggctagtgagtgagccgtcgtcacaaagatctgcttgtttaggccacaatccaccagagcaccgtggatgctttgcatagccgggaa  16848000               ----------->HVH21             <---------At4g35610             --------->At4g35610        ----------->HVH21        --------->ALFIN1        <---------MYB52(1)                                                   <------MYB83      <---------ANAC58                                                       <------MYB46(1)      <---------ANAC58                                               <---------MYB46(3)      <---------O2                                             ------>ZmHOX2a(2)      <---------ANAC46                                        <------ZmHOX2a(2)      <---------TGA1a                                        <---------ARR14(2)      --------->TGA1a                                        <---------ARR11(3)    ------>NtERF2                ====================================HOX2a_HOX2a <---------At4g35610             <------ZmHOX2a(1)           --------->ARR14(2) --------->At4g35610             =====================================HOX2a_HOX2a <XXXXXXXXXXXXXXXXXXXXXMIR771--------->ALFIN1                --------->ARR11(3) ===============bZIP_DOF   <---------At4g35610               --------->ARR14(3)   <---------ZAT2 ---- >LBD16<-----------HVH21  <---------TOE2(3)  --------->ZAT6  <---------ARR14(3)<--------P        <---   gagggctgccgtgagggctgactggtttgaggtgaggacttcgtttcccactacgatggccacgatcttggtgtttgggaggtaagcttggacgttctcc  16848100                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   --------->LBD16                                                                                   <---------ATERF1(1)                                                                                  <---------DEAR3(1)                                                                                  --------->DEAR3(1)                                                                                  --------->ATERF1(2)                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                ------>NtERF2--------                                                                                --------->ZAT2                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                              --------->ATERF1(1)                                                                              <------NtERF2  <-------                                                                             <---------ATERF1(1)                                                                   <---------ZAT2--------->RAP2.3(1)<                                                                   --------->ZAT2--------->DEAR3(2) <                                                                   <---------At4g35610       --------                                                --------->DOF5.7(2)--------->At4g35610       ========                                              --------->ANAC46   <---------ZAT18<---------ZAT2 ------  --------->MYB46(3)                  <-----------RAV1(2)      <-----------HVH21<---------ATERF1(1) < --------->ANAC46              ----------->RAV1(2)             --------->At5g28300<---------ATERF1(2) -->ZmHOX2a(1)                 <---------At4g35610         <---------ALFIN1  --------->LBD16 -------- --------HVH21<----------DOF2  --------->At4g35610<---------DOF5.7(2)      <---------LBD16  <-------TEIL   ttcacccagccttgggctttaatagggtcgctcatctgagccaggtactcgttaccgagggccacggtgagctcgaagccggagccggcgaaggcacgta  16848200                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------       <---------ARR14(2)                                                            <-------GAMYB       --------->ARR14(2)<---------WRKY18(1)                                        <---------MYB46(3) ->TGA1a      <------NtERF2                                                         --------->MYB111(2) --TGA1a     <-----------HVH21       --------->PCF2            <---------ANAC58  --------->HSFB2a(1) ---------ANAC58      <---------ANAC58                         <---------ANAC46  <---------HSFC1(2) ---------ANAC46      <---------ANAC58                         <---------ANAC58  ------------>MYB.PH3(2) ->ANAC58<---------DEAR3(1)        <---------At4g35610        ----------->STF1   <------MYB46(1) ======================================bZIP_DOF              <---------TGA2(2)   <------MYB83<------- --->ALFIN1  ------>NtERF2         --------->At4g35610      ----------->HVH21    --------->HSFC1(2) ---------ANAC58    --------->ARR11(3)  ----------->RAV1(1) ----------->TGA1     <---------HSFB2a(1) ->ANAC58------>ZmHOX2a(2)  <----------DOF2         <------ZmHOX2a(1)         <------ZmHOX2a(1)   gggcttgtggatcggcgtcatagagcttgacttttgtagctcccacagacttgaggagagggatgacgtttttagggggaggaaggttgttagcgacctg  16848300                                                                                       --------->ANAC58 ->O2                                                                                  --------->ANAC58 ->ZAT2                                                                            >>>>>>>>>TBF1 --bZIP60(2)                                                              --------->ZAT14 --->RAV1(2)                                     --------->ANAC58         --------->At4g35610 --O2                           <------ZmHOX2a(1)--------->ANAC58         <---------At4g35610 --ZAT2            <------ZmHOX2a(1)     <---------ZAT14                  <---------ZAT14   gccatagttgatgccgatggaggagacgatgagaggaagagagaacagagcaaggcaaaacagagagaagagagactgcagagaagaagaagccatagat  16848400                                  <---------MYB46(3)              <---------PCF5                               <---------MYB46(3)                 <---------PCF2 --------->ARR14(2)                              <---------AtMYB61                   --------->TCP20<---------ARR14(2)                           --------->ATHB12                  --------->ATHB12   <------ZmHOX2a(1)                      --------->ZAT14                   <------NtERF2       <---------MYB52(1)                      --------->ZAT18          *TSS  <------ZmHOX2a(1)     <-------GAMYB                      <---------ZAT14        <---------YAB1 ----------->HVH21  <---------YAB1  ------   gaagtgagagagagagagagagagcgtagtgagtggttgtgagcaagatgatagaggaggcagtgatgggaccagagcgttaggattcactaaatttcaa  16848500                   -------->HAHB4                   --------->ATHB12                   <---------ICU4                   <--------ATHB1                  <---------AHL20(2)                  --------->AHL20(2)                  --------->ICU4                              <---------ZAT2                  <---------ATHB51                            --------->At4g35610             ----------->GT1                       <---------MYB46(3)           ---------->DOF2                         <------MYB46(1)        --------->YAB1          ---------->DOF2    <------MYB83     --------->YAB1--------->ATHB51            <-----------RAV1(1)                     --------->ANAC58     ----------->GT1<------------CBF  ---------->DOF2         <---------At4g35610      --------->ANAC58 ---->DOF2--------->ICU4 ---------->DOF2       --------->ICU4 --------->ZAT2   <---------LBD16   <---   agtgaaatagtaataaagaaataattgaaaagaagaaagagaaagagtaatgttggtttggatgagctggaagtcagtgtctctggagcaagcagtagag  16848600                                                         <---------YAB1                                                        --------->KAN4(2)                                                      <------ZmHOX2a(2)                               --------->ARR14(2)     ===================HOX2a_HOX2a                    <---------ANAC58                 <---------ARR11(3)           <---------ANAC58    <---------GLK1(2)     --------->ARR11(3)         --------->ZAT14           <---------ANAC58    <---------ARR14(2)   <---------At4g35610         --------->ABI4(2)        <----------DOF2  ------>ZmHOX2a(1)     ----------->HVH21  ------>ZmHOX2a(1)          <-------     --------->GLK1(2)   ====================================HOX2a_HOX2a        <---------ZAT18   <-- ---ZmHOX2a(1)      <---------ANAC58           <---------YAB1  ---------->ID1   <---------ZAT14   ---   gagagagcatctttcttgttttgcttcctctcggattctcacttctcttatgacagatcattcttgtcctcttctctctcggtgctctcattacaacact  16848700                                             <---------ARR11(3)                                             --------->ARR11(3)  <------MYB46(1)                         <<<<<<<ZML2    <---------CCA1(2)  <------MYB83                       -------->P    --------->ZAT6   ------->GAMYB--------->REM1(1) --ALFIN1         <-------TEIL   <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->MYB46(3)          <----- -------STY1(2)<---------At4g35610   ------>MYB83-------->P       <---------At4g35610     <----------DOF2 ------>STY1(2)--------->At4g35610   ------>MYB46(1)  <---------ATHB12   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   tgctaggtatttgagacagctacatggagacagaacaccaactagaacatctaccactcatgtctttcaacagcctgtttgcttcaactagtcttttttc  16848800                                                                              --------->ATHB12                                                                              <--------ATHB1                                                                   --------->CCA1(2)                                                                  <---------ARR14(2)                                                            <-----------GT1  <---------ATHB12                                                      <---------TOE2(3)      --------->ICU4         --------->GLK1(2)                           ---------->DOF2<-------TEIL        <---------GLK1(2)                         <----------DOF2 --------->ARR14(2)          -------  --------->ANAC46                  --------->ARR11(3)<---------TOE1(3)  ------->GAMYB     --------->WOX13(1) ------GT1                     <-------TEIL       <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxx   caatacaccagaatttgactaaatccaactaggttgatgaccttgaacggctctttaaagtttaaccagatacaacccaatgattcaaaacaccaattag  16848900  Previous    Next  AGI:  At5g42100.1    Description:  ATBG_PAP/ATBG_PPAP (A. THALIANA BETA-1,3-GLUCANASE_PUTATIVE); glucan endo-1,3-beta-D-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds. Identical to Putative glucan endo-1,3-beta-glucosidase 10 precursor [Arabidopsis Thaliana] (GB:Q9FHX5;GB:Q3E8I9); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G32860.1); similar to hypothetical protein - potato (GB:S31196); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 16846379    to: 16848447    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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