Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->TOE1(3)                         --------->TOE2(3)                                      ----------->GT1                   ------------>CBF                                   <---------AHL20(2) -----DOF5.7(2)  <---------ZAT18                                      --------->AHL20(2) ----WRKY45      --------->ZAT18                                      --------->AHL20(1)        <---- ----WRKY12   <------MYB46(1)                                        --------->AHL20(2)      <------- ----WRKY38(1)<------MYB83------>ZmHOX2a(1)     ------->GAMYB     <---------AHL20(2)         -------- -->DOF5.7(2)--------->MYB59                  -------->P          --------->AHL20(2)         -------- ----HVH21<---------MYB46(3)               <---------ATHB12      --------->AHL20(2)          <-------   acgcgtttttggtgtttggtccacaatccttagcctctaagacaaatcaacccaaattttcaaaacataaaattaattagttttgaaaaaaacaatattt  16832300                                                            --------->ATHB51                                                            --------->ATHB12                                                            <---------ICU4                                                           --------->ICU4                                                      --------->ANAC46                                                      --------->ANAC58                --------->At4g35610                                                      <---------ANAC55(2)             <---------At4g35610                                                      --------->bZIP60(1)          --------->ZAT2                                                      --------->ANAC55(2)          <---------ZAT2                                                      --------->bZIP60(2)          <---------At4g35610                                                      <---------bZIP60(1)          --------->At4g35610                                                      --------->O2                <-----------RAV1(1)       <---------CCA1(1)                              --------->ANAC58         <---------ARR14(2)       <---------RVE1(1)                              <---------O2             --------->ARR14(2)      --------->ARR11(3)                              --------->TGA1a         <---------CCA1(2)      <---------ARR11(3)                              <---------TGA1a       --------->ANAC46 -----AHL20(2)                             =====================bZIP_DOF   --------->LBD16 --AHL20(1)                                ---------->DOF2 <---------YAB1 <---------ANAC46 ->AHL20(2)       --------->MYB52(1)  ------>ZmHOX2a(1)<-----------TGA1   <---------ANAC58 ->AHL20(1)     <---------YAB1<---------AHL20(2)     <-----------STF1     <---------ANAC58 --ARR11(3)   <-----------GT1--------->AHL20(2)     <---------ALFIN1     <---------LBD16   taaaattagatatttgttactatcggcacaaataaatctcctctcaaaagtctgccacgtcataattgcaattgttccgcgtctctgctgctacatgctc  16832400                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                           --------->ATHB12                                                                                          <---------AHL20(2)                                    <---------YAB1                                        --------->AHL20(2)                               ------>MYB83                                               <---------AHL20(1)                  <-----------GT1  --------->AHL20(2)                                  <---------ICU4    --------->ANAC58           ------>MYB46(1)                                        --------->ICU4    --------->ANAC46         <---------MYB59      --------->DAG2          --------->At5g28300<-------    --------->ANAC58      <-----------GT1        ---------->DOF2         ----------->GT1  --------->AHL20(1)   attcactcgcaaatcgcaattttcttcttaaccaaatttttatacaaaaaaaaaagctcagacagaagtactaaatggtaaatttgacataattaattgg  16832500                                                                  <----------DOF2                                                               <-----------GT1                  <----         <---------YAB1               <---------AHL20(2)   --------->AHL20(2)                 XXXXXXX      <---------AHL20(2)              --------->ATHB12     <---------AHL20(2)                 <------     <---------AHL20(2)              --------->ICU4        --------->AHL20(1)            <-----------HVH21     --------->AHL20(2)              --------->AHL20(2)    <---------AHL20(1)           ------------- --------->GT1                <---------ANAC46         --------->AHL20(2)     --------->YAB1  <------ ------ANAC46                 <---------ANAC58         <---------AHL20(2)    <---------ATHB12 ------- ------ANAC58                 <---------ANAC58    ------>ZmHOX2a(1)   <-----------GT1 <----------DOF2 ------ANAC58          <---------ANAC58          --------->TOE2(3)<---------DAG2      --------------- --WOX13(1)            <---------ANAC58 <---------YAB1--------->AHL20(2)--------->ANAC55(2)  --------   tgtgtaattttataaatacagaagtacttgtgtcttgtatttattagtattccttatttaataaattacttttcacttaatcatccaactttgtcagatt  16832600       --------->TOE1(3)       --------->TOE2(3) --------->ANAC58 --------->ANAC55(2) --------->ANAC46 <---------ANAC55(2) --------->ANAC55(1) --------->ANAC58                                <---------HSFB2a(1) ---TEIL                                         --------->HSFB2a(1) XXXXXXXXXXXXX>MIR403                      <---------LBD16 ---ARR14(2)                              <---------ANAC46                        ---------->DOF2 ---------->TaNAC69(2)           ----------->GT1 --------->HSFC1(2)             <---------AHL20(2) ---GLK1(2)       --------->AHL20(1)      <---------ANAC58    ----------->HVH21 --------->AHL20(2) -->ARR14(2)      <---------AHL20(2)      <---------ANAC58  <---------At4g35610 --------->YAB1<------ ------>WRI1      --------->AHL20(2)   <----------DOF2      --------->At4g35610<---------ATHB12 ->At4g35610 --------->AHL20(2)<------------CBF  <---------HSFC1(2)        ------------>CBF   <------   cacacgcaaccttgaaaaaataaaatagaatggtattgtgactttcgtggaaatttctacttagatgacacagttgctccaattaaaagcttacaacttt  16832700                                                            ------->GAMYB                                                            --------->TOE2(3)                                                          -------->P                     <---------ARR11(3)                                                          ------>MYB83                   --------->ARR11(3)                                                          ------>MYB46(1)            ---------->DOF2                                                        --------->AtMYB61      ----------->GT1      <----------DOF2                                  --------->MYB46(3)  ---------->DOF2 ----DOF2        *TSS                         <---------ALFIN1          --------------->AGL15 ---DAG2  <----------DOF2       <-----------GT1      <-----------GT1   <-----------------AGL1    <---   ttcttcatctttctttatatttctcacccatttttcaccaatttctctccacttaaaaccaaccccaattctcaccaaaaatcgcaaaaaagatttcaac  16832800                                         --------->YAB1                                        <---------ATHB12                                      --------->WOX13(1)                                    <------ZmHOX2a(2)                         --------->ARR11(3)                             --------->WOX13(1)       ----                         <---------GLK1(2)                             --------->MYB46(3)     <------              ----------->GT1      --------->AGP1                 --------->YAB1              -------             <------ZmHOX2a(2)     <---------ARR11(3)          --------->YAB1               ---------            --------->ARR14(2)  <---------HSFB2a(2)       <---------ANAC46         <----------DOF2---            <---------ARR14(2)  --------->HSFB2a(2)       ----------->GT1  --------->YAB1   <-------- -------DOF2--------->AGP1   <-----------GT1  <---------ZAT6  <---------YAB1 --------->At4g35610 <---   tttcgataaacccagatcgaaaaatcagatttttccagatcaatcagagagttagagatggagtataataacaacaatcagcaatctttttggcagttca  16832900                                 --------->GLK1(2)                                 <-----------ARR10                                 <---------ARR11(1)    --------->ZAT2               --------->ARR14(2)    <---------ZAT2               ------->TEIL    --------->At4g35610 ------->TEIL    ----------->RAV1(2) <-----------ARR10    <---------At4g35610 <---------ARR11(1)  <-----------RAV1(2)   --------->GLK1(2) ----->At4g35610        <---------ARR14(2) ---ZAT14               --------->ARR14(2) -->ZAT14              <---------ARR14(1)              ------>ZmHOX2a(2) >At4g35610  --------->ZAT14     <---------ARR14(2)  <---------AGP1 ------>DEAR3(1)    --------->ANAC58                 --------->ARR14(2) -At4g35610  <---------ZAT14    <---------ARR14(1)   <---------ARR14(2)      ---------->DOF2 ------At4g35610    --------->ANAC58          --------->MYB46(3)  XXXXXXXXXXXXXXXXXXX>MIR866-3P   gcgaccagctgagagttcagacaccgaatctagcgaatctgtctctcaacgactcgatctggagcacaaactctgtcttcaaagagcgtcgaaacttaga  16833000            --------->At1g77200            ----------->HVH21            <---------ETT(1)            ------->GAMYB            --------->DEAR3(1)            --------->DEAR4(1)            --------->DREB2C(2)           --------->DEAR3(2)         <---------ALFIN1         --------->DEAR3(1)         --------->AtMYB61        --------->MYB46(3)        <---------MYB55(2)        <---------ABI4(2)       <---------ATERF1(1)       ------>NtERF2      --------->DEAR3(1)      <---------ALFIN1     --------->ATERF1(1)     <------NtERF2     --------->ERF1    <---------RAP2.6(3)    <---------ATERF1(1)    ------>NtERF2--------->ANAC58   --------->RAP2.3(2)   --------->RAP2.3(3)   >>>>>>>>>AtERF-5   --------->RAP2.6(2)   --------->ATERF1(2)          <------ZmHOX2a(2)   <---------ATERF1(2)         <---------ARR14(2)   --------->DEAR3(1)          --------->ARR14(2)   >>>>>>>>>AtERF-4            --------->AGP1   >>>>>>>>>AtERF-3       -------->P   --------->ANAC46      ------->GAMYB  --------->YAB1   >>>>>>>>>AtERF-1     --------->MYB46(3)   --------->At4g35610                  <---------ARR14(2)   >>>>>>>>>AtERF-2     <---------MYB111(2)--------->YAB1          --------->TOE2(3)  --------->ERF1 --------->ANAC58      <---------YAB1           ----------->RAV1(1)  --------->RAP2.3(1)   <---------MYB55(2)<---------YAB1    <---------ETT(1)      --------->ARR14(2)   catagccgccaccaccgacaagaacaacaaccagatcgactattatcagaagaagacaacttccgacaacatcaattccaactggaactggaagtcttct  16833100                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 ====                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                             ------->GAMYB                                                                                             ========                                                                                            ---------                                <-----------RAV1(1)                                         ---------                             --------->ARR14(2)                                          <---------WRKY12                       <---------ARR14(2)                   <-----------GT1              <---------WRKY38(1)                       --------->ARR14(2)         --------->DEAR3(1)             ------->GAMYB   <---                       <---------GLK1(2)    --------->ARR14(2)                   ====================                       --------->ARR11(1)   <---------ARR14(2)--------->ANAC46  <---------MYB52(2)---         ------->GAMYB<------ZmHOX2a(1)    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->At4g35610<--      --------->MYB52(1)     <---------ARR14(2) <---------At5g28300<---------ATHB12<---------At5g28300   --------->ANAC46 <---------TOE2(3)  <-------TEIL       <---------AHL20(2)   <---------At4g35610---   ggttcaaacaacgacatgggtttaggattcggacctgtgggttcaaaatccaccgtcgatttaaacccaatcgacaaattcaactcaccgttcaacgaca  16833200  Previous    Next  AGI:  At5g42050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27090.1); similar to unknown [Populus trichocarpa] (GB:ABK95892.1); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Development and cell death (InterPro:IPR013989) Range:  from: 16832717    to: 16834529    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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