Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ANAC58                                                               --------->ANAC58                                                           --------->ANAC55(2)                                                           --------->ANAC55(1)                                                           --------->ANAC46       <---------RVE1(1)                                   --------->ANAC58       <---------CCA1(1)                           --------->AHL20(1)      <---------ARR11(3)                           --------->ARR11(3)      --------->ARR11(3)          ----------->GT1  <---------AHL20(1)             <------MYB46(1)     <<<<<<<<<RAP2.2--------->ARR11(3)  --------->AHL20(2) --------->ANAC58       <------MYB83 --->YAB1           <---------ARR11(3)  <---------AHL20(2)<---------LBD16        --------->MYB59   <- ---->GT1  <---------AHL20(2)<---------AHL20(2)    <---------ARR11(3)    ----------->GT1       ------   taattttagatatttattcgaagatgttttttaaaatggtattttattcgaaatatttttcacggaagcactggatggaaaatttggtagcaaaaaaaaa  16816200                <---------At4g35610                ----------->GT1                --------->At4g35610         >>>>>>>>>CBP60g         >>>>>>>>>SARD1     <---------------AGL15     ==================================================================MADS_MADS     --------------->AGL15               --------->AHL20(2)    ----------------->AGL1          --------->AHL20(1)                  <-----------GT1 --------->GLK1(1)                  <---------AHL20(2)         --------->WRKY18(1) -----ZmHOX2a(1)<------NtERF2       --------->AHL20(2) --------------->AGL15 ---->DOF2      <---------ZAT2   --------->YAB1      <-----------------AGL1                    ------   aggatttcgaaatttggcagctaaaatttgttcaaaaataaaatgaaataactcttactaatatggtcaagaattaacttcagaacatattttgaaaatg  16816300                              <---------DEAR3(2)                              <---------MYB46(3)                             --------->ETT(1)                        <XXXXXXXXXXXXXXXXXXXXXMIR472                   --------->DAG2                   <---------------AtSPL3                   <---------------AtSPL8                                                   <--------        --------->MYB52(1) <-----------HVH21                                      ---------->DOF2      <---------AHL20(2)<---------ANAC55(2)                                    --------->ANAC58 <----   --------->AHL20(1)   --------->ANAC55(2)                                    --------->ANAC58 -----   <---------AHL20(2)  <-------TEIL          <---------ANAC46             ----------->HVH21 ---------   --------->AHL20(2) --------->CCA1(2)     <---------MYB52(1)          <---------ZAT2      <--------  --------->AHL20(2) <---------SPL7   ---------->DOF2                   <---------At4g35610 ---------  <---------AHL20(2) --------->ARR11(1) --------->MYB52(1)              --------->ZAT2     --------->AHL20(2) ----->GT1       ---------->DOF2  --------->ETT(1)                      --------->At4g35610<---------ATHB12   taaattaaattatcggatgaaaaggtacgggtcgggtcggaaaaccggtgtgttttgtaatgggcctctatgtaagctgacaagaaaagtccaataaatt  16816400                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ------>NtERF2                                                                                           <---------ALFIN1                                                                                           --------->DEAR3(1)                                                                                     <-----------HVH21                                                                                   <-----------------                                                                --------->YAB1     ==================                                                                -------->ATHB1     ------>ZmHOX2a(2)                                                                --------->ATHB12  <------ZmHOX2a(2)    <---------YAB1                                              <---------ICU4    =================== -AHL20(2)                                                     <---------ATHB12  --------->ARR11(3) -----AHL20(2)               <---------ANAC46                  <---------YAB1    <---------ARR11(3) ---->AHL20(2)            ----------->HVH21                    --------->ICU4    --------->ARR14(2)<- >AHL20(1)       <----------DOF2                             --------->YAB1      <---------ARR14(2)-- -AHL20(1)  <---------ANAC46 <---------bZIP60(2)          --------->YAB1       ----------->ARR10----- >AHL20(2) <------NtERF2  ----------->TGA1               <---------ZAT6  <---------TOE2(3)--------->MYB46(3)   aaaaatatgagtcgtcgtggtttatcgagtgacgcgttgagagtcttgagacagagttactgataatcattgttttaggctaagatcggtgagccaccca  16816500    ------>MYB83    ------>MYB46(1)  --------->AtMYB61 -------MYB111(2) ------>MYB46(3) -------MYB55(2) -->MYB83 ---->P------>ZmHOX2a(1) -->MYB46(1) ->MYB46(1) -->MYB46(3)                                                                       ----------->GT1 ---MYB111(1)   <---------AHL20(1)                                                *TSS ---MYB55(2)    --------->AHL20(2)                                             <---------ZAT2 ->ANAC58       --------->AHL20(1)                 ---------->DOF2             --------->ZAT2 ->ANAC58  --------->AHL20(2)          ----------->GT1                         <---------At4g35610 ->ANAC46  <---------AHL20(2)        <------------CBF                          --------->At4g35610 ------TaNAC69(2)<---------AHL20(2)--------->AHL20(2)                         ----------->RAV1(1) =============HOX2a_HOX2a          <---------AHL20(2)                      --------->ANAC58 =============HOX2a_HOX2a          --------->AHL20(1)                     ------------------------>ANAC81 --------ALFIN1 <---------AHL20(2)--------->AHL20(2)                   <---------MYB52(2)       ----- ----->GAMYB<---------AHL20(2)    <---------AHL20(2)        ---------->DOF2--------->ANAC58 <-------- ->MYB83  --------->YAB1  <----------DOF2       --------->AHL20(2)   ---------->DOF2     ------------   accaccttcctattttaatttaatgcttctttttaaaaaaattgtagaaaataaaaagcccagaaagagcccaaagaacgcagcagagaaaaaaaaaaca  16816600                                                ------>ZmHOX2a(2)                          --------->ZAT18                                               <------ZmHOX2a(2)                           <---------ZAT18                                              <---------ARR14(2)                     --------->TOE1(2)                                              --------->ARR11(3)                    --------->ANAC46                                              --------->ARR14(2)                    --------->ANAC58                                   --------->YAB1                                   <---------ANAC55(2)                                   <---------ICU4                       ---------->DOF2 ---------->DOF2                                --------->WOX13(1)                --------->LBD16   --------->ANAC55(2)   ---------->DOF2         <-------TEIL       <---------ARR11(3)  ----------->GT1   --------->ANAC58 ----->DOF2          ------->GAMYB<---------ATHB12        --------->ARR14(2)       <-------TEIL --ID1           <---------WRKY38(1)    --------->At4g35610     <---------LBD16    ------->TEIL ------------>ANAC81--------->MYB46(3)<---------ICU4      <---------ARR14(2)   <---------------AtSPL3   aagaagaaagaaaacttgctcaacgacgattcatcaatcatcatctccgatcttcttccaaatccctccggtgaaaaagacgatgtacgtaagagcactt  16816700                                         ------>ZmHOX2a(1)                                       ----------->RAV1(2)                                     --------->ARR11(3)                                     <---------ARR14(2)                                     --------->ARR14(2)                                    --------->GLK1(1)                                    <---------GLK1(1)  ------>NtERF2                     <---------CCA1(2) --------->DEAR3(1)         <---------MYB46(3)                                          ------>ZmHOX2a(1) ----------->HVH21         --------->ALFIN1  <---------MYB46(3)       ------>ZmHOX2a(1)--------------   ccgacgacggatgtgaatcggaacacagagtggttcacatatcctggtgtttggactacttatattctcatcctcttcttctcttggctcctcgttctct  16816800                                                                               <------ZmHOX2a(2)                                                                              --------->ARR14(2)                                                                      ------>ZmHOX2a(2)                                                                     --------->GLK1(1)                                                                     <------ZmHOX2a(2)                                                                     <---------GLK1(1)                                --------------------->WRI1          <-----------ARR10                        <---------ANAC58                            <---------ARR14(2)                        <---------ANAC46                          --------->LBD16                        <---------ANAC58                         <---------HSFB2a(2)             <---                     <------NtERF2                   <---------At5g28300      <---------ARR14(2) <---                ------>ZmHOX2a(1)                   <-----------GT1 --------->ARR14(2)           <--- ------->WRI1 ----------->RAV1(2)       <---------At4g35610<---------YAB1 ------>ZmHOX2a(1)  <-------   ccgtcttccattgttctcctggcatcgcttggaccattgttcatctcgctcatttcaccgtattattcccgatctcctccgatccaatttcgaaattgtt  16816900                                             <---------YAB1                                            ------->TEIL                                           <---------CCA1(2)                                         --------->ANAC58                                         --------->ANAC55(1)                                         --------->ANAC55(2)                                         --------->O2                                         <---------ANAC55(2)                                         --------->ANAC58                                         <---------O2   --------->HSFB2a(2)                   <---------TGA1a   <---------HSFB2a(2)                   --------->TGA1a ---MYB83                            <-----------HVH21 ------MYB46(3)                     --------->ANAC46                                                - ---MYB46(1)                      --------->HSFB2a(2)                                              <- ----RAV1(1)           ----------------------->TaNAC69(2)                         <---------At4g35610   ggtttctagatttgaatttttgagtttttttgttttctaggtcacgtatcattccttccattggaagaagggaacaccatttggagatgatcaaggagtc  16817000                                                   --------->ARR14(2)                                                --------->ANAC46                                                <---------ANAC55(2)                                                --------->ANAC55(1)                                                --------->ANAC58                   <---------ANAC58                                         --------->ZAT2                            <---------ANAC46                                         --------->At4g35610                 ------>ZmHOX2a(1)          <---------ANAC58           --------->ANAC58                        <-----------RAV1(1)          <---------ANAC58    <---------ICU4    --------->ANAC55(2)    <---------MYB46(3)      <---------WOX13(1)   --------->YAB1<---------At4g35610          <---------MYB52(1) -------->YAB1           <---------WOX13(1)     --------->ANAC58     <-------GAMYB <---------ANAC58 --------YAB1  <---------ANAC46      --------->ANAC58             <---------At5g28300   tataatagattgacttggtgggaacagattgataatggcaagcagcttacacgtaatcgcaaatttctcaccgttgttcctgttgtcttgtaagttcctt  16817100  Previous    Next  AGI:  At5g42000.1    Description:  ORMDL family protein. similar to ORMDL family protein [Arabidopsis thaliana] (TAIR:AT1G01230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68846.1); contains InterPro domain ORMDL; (InterPro:IPR007203) Range:  from: 16816582    to: 16818256    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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