Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->RAP2.6(3)     --------->MYB52(1)    ----------->HVH21  <---------bZIP60(1)  --------->bZIP60(1)       <------NtERF2  <---------REM1(1) ------>ZmHOX2a(2) --->SPL7          <------ZmHOX2a(2) ->TEIL           <---------ARR11(3) --SPL7--------->MYB46(3) <---------LBD16 -ANAC58          --------->ARR11(3) >ANAC55(2)       --------->ARR14(2) -bZIP60(2)       <---------ARR14(2) -ANAC58          --------->GLK1(2)                       ----------->HVH21            --------->ARR14(2) -ANAC46------->GAMYB<----------DOF2                    <---------At4g35610            <---------ARR14(2) -ANAC55(2)       <-----------ARR10                     --------->At4g35610      --------->ANAC58 -bZIP60(1)      <------ZmHOX2a(1)                     --------->ARR14(2) <---------ARR14(2) >bZIP60(1)<-----------RAV1(2)                         <---------ARR11(3) --------->ARR14(2)       -- ----->AtSPL3   <---------HSFC1(2)                    <---------GLK1(1)--------->HSFB2a(2)      ----- ----->AtSPL8   --------->HSFC1(2)                    --------->GLK1(1)<---------HSFB2a(2)   ------->TEIL --------------TaNAC69(2)<---------LBD16     <---------AtLEC2 <---------MYB59    --------->ANAC58 ---   cctgatgtaacggccagaaggatctttctcggcaaaatcagcctcttccatggacgatatctgacctaaaaatccagaaccagaagccatatatgtatgc  16814800             --------->ANAC58           ---------->DOF2       ------->GAMYB                           --------->ALFIN1                        --------->At4g35610      --------->MYB46(3)                    --------->DAG2                             <---------At4g35610      <---------MYB52(2)              ----------->GT1     <---------TOE1(3)         ---------->DOF2 < --------->RAV1(1)  <---------HSFB2a(2)    ---------->DOF2<---------TOE2(3)     ---------->DOF2 <---- ---->ANAC46 --------->ANAC58  <------ZmHOX2a(1)----------->GT1             ---------->DOF2  <xxxxxxx ------>ANAC46    <---------ATHB12   >>>>>>>>>TBF1   --------->GLK1(2)  ------------------------>ANAC81   acaacacaacaaacaaagcaatcgagaacagaaggagaagaagaaaaaagtggagaatttaaggtgagattgaagatgaaaagaaagaaagctgaagagg  16814900           ---------->DOF2       <---------YAB1  ----------->GT1  <---------TOE2(3)                                                --------->YAB1  <---------MYB46(3)----------->GT1                           ===================bZIP_DOF <---------TOE2(2) --------->DAG2                             ---------->DOF2 --------->ANAC58 ---------------------WRI1                          <-------TEIL              --------->ANAC58 --ZmHOX2a(1)    ---------->DOF2>>>>>>>>>TBF1      --------->CCA1(2)   --------->TGA1a     --------->ATHB12 xxxxxxxxxsmallRNA(s)     --------->YAB1       <------ZmHOX2a(1)       <---------TGA1a  --------->GLK1(2)   acggaggttattacaaagaaaaaggttataagaagaagaaatggacggaggagatacaatcggagaaagcctcacgagcgaagcaataagaatcgattga  16815000                                  <------NtERF2                                  --------->RAP2.3(1)                                 <---------RAP2.3(1)                                 <---------ORA47(2)                                 <---------ERF1                                 ------>NtERF2                                <---------DEAR3(1)                                <---------DREB2C(2)                                <---------ATERF1(2)                                <---------RRTF1(3)                                <---------RAP2.3(2)                         --------->GLK1(1)                                --------->ATERF1(2)                        --------->ARR14(2)                                <---------ANAC46                         --------->LBD16                               <---------LBD16   <-----------HVH21      <---------HSFB2a(2)                           --------->ALFIN1     --------->ANAC46       <---------LBD16              <                    --------->MYB52(1)    <---------GLK1(1)    <-----------GT1                     <-                   --------->ARR14(2)     --------->GLK1(1)   <-----------GT1------>ZmHOX2a(2)   ----                   <---------ARR14(2)---------->DOF2        <----------DOF2<---------ARR14(2)    <---                ------>ZmHOX2a(2)<---------ATERF1(1)       <---------GLK1(2)<------ZmHOX2a(2)    <---               <------ZmHOX2a(2)<---------RAP2.6(2)  --------->At4g35610--------->HSFB2a(2)      <---              --------->ARR14(2)<---------RAP2.3(3)<---------ICU4   --------->GLK1(1)      <---------YAB1              <---------ARR14(2)<---------RRTF1(2)<---------ATHB12  <---------GLK1(1)    <---------ANAC46   agaagttcgaaatcgagatcggaaacggagtttggcggcgaaagaaatccccatcatctccgattttccgatttcccgatctcttctcccgtcgtgattc  16815100                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                                       --------->GLK1(2)                                                                      <---------GLK1(2)                                                                  ---------->DOF2                                                                --------->LBD16            <-----------GT1                                     --------->ANAC46        <----------DOF2                                        --------->LBD16 -----------ARR10                            <---------YAB1    --------->HSFB2a(2) --------CCA1(2)                       --------->MYB46(3)      <------NtERF2 ----->ANAC55(2)                 --------->YAB1    <---------YAB1--------->LBD16 ------ANAC55(2)          ------>ZmHOX2a(1)  --------->ICU4    <---------HSFB2a(2)               ---- ------ANAC58             ====================HOX2a_HOX2a   --------->PCF5                    ------- ------ANAC58      --------->AHL20(2)  ------>ZmHOX2a(2) --------->MYB59                ----------->GT1   cgtctcttctcttttatccgattaaatccttccattgatgatccaccatgattttgattttggtccccgaaagaatctgctagatcgatagagaaaaaac  16815200                                                                                 ------>NtERF2                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                                --------->RAP2.6(2)                                                                               <---------ATERF1(2)                                                                               --------->ATERF1(2)                                                                               <---------RAP2.6(2)                                                                               <---------DEAR3(1)            --------->ICU4                                                    <------NtERF2           <---------------------WRI1                                         --------->RAP2.6(3)          --------->YAB1                                                      --------->ATERF1(1)         <---------YAB1                                                      <------MYB46(1)         --------->ICU4                                                      <---------ATERF1(1)       --------->YAB1                                                        <------MYB83      <---------YAB1                                                        <---------DEAR3(1)      --------->ICU4               <---------LBD16                          --------->MYB111(2)    --------->YAB1      <---------ATHB12                                   <--------P            ---- <------ZmHOX2a(1)    --------->WOX13(1)              <------ZmHOX2a(1) --------->DAG2  <---------AHL20(2) ----->TOE1(2)      <---------ATHB12<---------ANAC46<---------TOE2(3)   <---------TOE2(3)      ------ -->MYB52(1)<---------YAB1---------->DOF2---------->DOF2              ---------->DOF2  --------->AHL20(2)   gaaggatgatgatgatgatgaaatcaatgaaaggaatttcggagaaagggaatttaggaagaacaaaacaaaaaaaggttggcggccaaataaatcggaa  16815300                              <---------DAG2                              <----------DOF2                          ------->GAMYB                          <---------ZAT18                      <---------ANAC55(2)              <----                         --------->ANAC58                   --------->ICU4                -----------                         --------->ANAC58                 <---------ICU4                  <---------ZAT2                       --------->MYB52(1)          <---------YAB1                         --------->At4g35610                      ------->GAMYB               --------->KAN4(2)   ------>ZmHOX2a(1)   --------->ZAT2                     <---------MYB46(2)          --------->KAN4(1)------->TEIL    --------->AHL20(2)                     <---------MYB52(2)          <---------KAN4(1)<---------ARR14(2)      <---------At4g35610      <-----------GT1<---------MYB55(2)         <---------KAN4(2) --------->ARR14(2)    <-----------RAV1(2) ------->GT1         --------->MYB46(3)<---------YAB1    --------->ICU4           <---------AHL20(1) ---->DOF2   <----------DOF2------->TEIL     <---------TOE2(3) --------->ANAC55(2)<---------AHL20(2)-   agtcaaattatctgtctttatcaactaacgcactttctcttatatttgagattattctactaattatgtatcctctgttttcattttatttcagctgact  16815400                                                                  <---------ZAT18                               <---------YAB1                     --------->ZAT18                         <---------TOE1(3)                        <-------TEIL                 ------                         <---------TOE2(3)       <---------AHL20(2)                           -------                        <-----------RAV1(2)      --------->AHL20(2) ----------->RAV1(1)    --------->ARR14(2) ------DOF2      --------->ANAC55(2)          --------->YAB1   <------MYB46(1)             <---------ARR14(2) >RAV1(2)      --------->AHL20(2)   <---------ICU4             <------MYB83           <---------ANAC55(2) -------->ANAC46 <---------ANAC55(2)--------->ATHB51      <---------YAB1              ----------->GT1   ttaggccatttatgcaattacatgtttcaggttatgaataatttctactaataaaacattatgctaggtgcaccaaaaaaaaaacattatgtaaatcctc  16815500                                                                               --------->AHL20(1)                                                                         --------->HSFB2a(2)                                                                         <---------HSFB2a(2)                                                               <---------YAB1  <---------AHL20(1)                                                 --------->YAB1<------ZmHOX2a(2)       <---------AHL20(2)                                              --------->WOX13(1) --------->KAN4(2) --------->AHL20(2)                                     ----------->GT1          <---------ARR11(3)  <---------YAB1 >ZmHOX2a(1)     <----------DOF2    ----------->GT1           --------->ARR11(3)  <---------AHL20(2) -->TOE2(3)  <-----------GT1    --------->AHL20(2)          <---------YAB1  --------->AHL20(2) ------   agaaatacgatgttatttcctttgtttcaaaatataaaatgtttaaaacaatcacacatattaagatcattctttctaaaaaatattatttatagaatta  16815600                                                                                            <--------                                                                                            ---------                                                                                       --------->AHL20(1)                                       <---------ICU4                                  --------->ARR11(3)                                       --------->YAB1                                  <---------ARR11(3)            <---------ICU4        --------->AHL20(2)                                   <---------AHL20(1)            --------->YAB1        <---------AHL20(2)                <---------YAB1   --------->AHL20(1)           <---------YAB1 <---------ZAT14                     <---------AHL20(2)     <---------AHL20(1)           <---------ATHB12       <---------YAB1              --------->AHL20(2)     <---------ARR11(3)     <-----------GT1      --------->ZAT14                    --------->AHL20(2)--------->MYB52(1) --->AHL20(2)             --------->At4g35610            <-------TEIL        <---------MYB52(2)     <   aaaattttaactaatcataagaaaaaactgcagaatataaatgatcacaaattatcaaatacatttaattttcatagaaactaacaaaatattttttaat  16815700  Previous    Next  AGI:  At5g41990.1    Description:  WNK8 (Arabidopsis WNK kinase 8); kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G64630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62937.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16812195    to: 16815234    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g41992.1    Description:  CPuORF58 (Conserved peptide upstream open reading frame 58) Range:  from: 16812195    to: 16815234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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