Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------------->AGL15                                                    <---------------AGL15                                                   ----------------->AGL3                                     <---------At4g35610                           <---------YAB1          <-----------------AGL3                        ----------->TGA1           ----------------->AGL2              <----------DOF2                      --------->At4g35610        --------->GLK1(2)     <---------TOE1(3)                   <---------At4g35610      ---------->DOF2            <---------TOE2(3)      -------   acttgcattcttcagaaacacatctgatgacgatttttcatctaagaaaagaatccattttaagaaacatttcaaggtaatctaagtgtctttagtaaaa  16808000                                   --------->ATHB12                                  <---------YAB1                               <----------DOF2                       <-----------GT1                     --------------->AGL15            <--------                   --------->AHL20(2)               <----------DOF2          ----------->HVH21   <---      <----------DOF2 <---------YAB1              ---------->ID1             ----------->TGA1 ------- --->DOF2          <---------AHL20(2)         <----------DOF2     ----------->GT1   --------->YAB1   gagaaatgctttcaaattcaatttataactggacttttgatttgttttctttttctttttgcaatgtagggaaaaaacagtgacgatgaaaattaagaat  16808100                                                                               --------->ARR14(2)                                                                               --------->GLK1(2)                                                                               <---------ARR14(2)     ---------->DOF2                                                 <---------WOX13(1) -TOE2(3)                              ------->GAMYB              <---------AHL20(2)           ------ -----ATHB1                         <-----------GT1     <----------DOF2  ----------->RAV1(1)  ------- -->YAB1     ---------->DOF2------->TEIL   <----------DOF2     <---------TOE2(3)             --------   aattcgcaaaagacacaaagagaataaatgaatatttgtaacagactttagctattagctttgttaatgtaattgccacaaaatccgaattttaaaaggt  16808200      <---------REM1(1)    <---------ARR11(3)                 --------->LBD16 --------->AHL20(2)     <---------TOE2(3)     --------->ARR11(3)               --------->ANAC46  <---------AHL20(2) ----->GT1                <---------CCA1(2)               --------->ANAC46    <---------AHL20(1) ---->GT1               --------->AHL20(2)              <-----------GT1      --------->AHL20(2) ->DAG2     --------->ANAC46    <----------DOF2  <---------AHL20(2)   ---------->DOF2             <--   taaatttgatgtagacgaaaacaaaattatatctcttttgcacatttgaattttttttatacaccgcaaactcaaagtattaaatttgtatttgaatttg  16808300                  --------->ATHB12          ----------->GT1          <------MYB83          <------MYB46(1)                                                 --------->AHL20(2)         --------->MYB59      ---------->DOF2                             <---------AHL20(2)    <---------MYB52(1) <---------TOE2(3)                           --------->YAB1   <-------GAMYB --------->ICU4                        <----------DOF2    ----------->TBP -------YAB1     <---------YAB1        <---------AHL20(2)   <----------DOF2       --------->ALFIN1   atgactgttatttggtaacatgattaagaaacaaaagaaattttaaggcccatgggcctttacttttaagcatcatataaataggtggaagaggcccatt  16808400                                                   --------->YAB1                                      --------->ANAC58          *TSS                        --------->ANAC58                                           ----        <---------ICU4              --------->MYB52(1)                                           <---       <---------YAB1               <---------DOF5.7(2)                                         -----      <-----------GT1<---------At4g35610   ----------->GT1                                    -------     <-----------GT1 --------->At4g35610  --------->DAG2                            ------>ZmHOX2a(1)    <---------AHL20(2)            --------->DOF5.7(2) <---------GLK1(2)    <-------TEIL------>ZmHOX2a(1)   tggcattttatcatttcttcgtgagatgatgttttcggtaacgaaaggtttaatcagaaacttggccttgttccaagttcgtcttcctcctctcgtagca  16808500                                                                                       --------->YAB1                                                                                      ---------------                                                                                     <---------------                                                                                     <---------------                                                                                 <------MYB46(1)    <                                                                                 <------MYB83    <---                                                                                --------->MYB111(1)<-                                                                                --------------->AtSPL8                                         <---------ALFIN1                       <---------------AtSPL8                                       <---------At4g35610                 ---------->DOF2       ----           ------>ZmHOX2a(1)    --------->ZAT6                           --------->ANAC58        ---- ----->At4g35610         <---------TOE2(3)              ------>ZmHOX2a(1)--------->ANAC58 <---------ICU4 ------At4g35610         <---------TOE1(3)  --------->AtMYB61         <---------MYB52(1) --------->ICU4 ------>RAV1(1)       <---------MYB52(1)<---------MYB52(1) --------->HSFB2a(2)  --------->MYB59  <--- -->At4g35610---------->DOF2  <-----------GT1     ------>ZmHOX2a(1)  <-----------HVH21<--------------   gcagtaatggctccttcaagcgtcgttagggtttactctaccgctacctctccttctccttctgaaatttccgtcaagaaagttggtactcataatggaa  16808600                                                                --------->GLK1(1)                                                            <------NtERF2                                                           --------->At4g35610   <---------At5g28300                                     <---------At4g35610 >AGL15                                                    ------>NtERF2 --AGL1                                                   <---------DEAR3(1) --AGL3                                                 --------->LBD16 -----------HVH21              --------->ATHB12         ------>NtERF2          ----------->HVH21 ------HSFC1(2)               --------->ICU4            <---------ATERF1(1)  --------->O2 ---------DOF2                <---------YAB1           --------->ANAC46      <---------O2          -- ----->HSFC1(2)--------->ARR11(3)                      <---------DEAR3(1)<---------MYB52(1)  -------- ----->HSFB2a(1)       <---------MYB46(3)        <---------GLK1(2)    <---------TOE1(2) ----------->GT1 ------HSFB2a(1)     <---------At4g35610--------->O2  <---------LBD16 --------->SPL7   <---------TOE1(3) -AGL15      ------->TEIL   --------->YAB1     --------->AHL20(2)   <---------SPL7     <---------TOE2(3)   gctttcactgcgacgaagctctcggctgtttcatgattcgcctcgtcgataaattctccggcgctgatatcgtccgttctcgtgaccctaaggtaactct  16808700                                                                       <----------DOF2                      <---------ANAC46                                 --------------->AGL15                <---------AGP1                         <---------STY1(2)      ----------->RAV1(2)      --------->ICU4          --------->STY1(2)     ------>ZmHOX2a(1)<---------ANAC58         --------->ATHB12      --------->At4g35610 ------->MYB46(3)     <---------ANAC58   <------ZmHOX2a(1)       <---------WRKY18(1)             ---- ->ZAT6 ------>ZmHOX2a(1)  <------ZmHOX2a(1) <---------WOX13(1)<---------WOX13(1)               <----   aacaatcctcctgaagtagctctggcttaggaaatgagtattaggagattgattagtagctagagattgactgcttaattttggaattaggggtttttga  16808800                                                 <-------TEIL                                               --------->At5g28300                                             --------->ANAC58                                             --------->ANAC46                                             --------->ANAC58                           <---------YAB1   --------->SPL7                         --------->CCA1(2) <<<<<<<<<SPL7           <---------ARR14(2)           --------->MYB52(2)      <-----------RAV1(1)   <---------ARR11(3)       <----------DOF2  --------->ARR14(2)    --------->ARR14(2) <<<<<<<<<SPL4 <---------ARR14(2)      <---------ANAC58  <---------ARR14(2)    <---------ARR14(2)<---------SPL7 --------->ARR11(3)      <---------ANAC58 ------->GT1           <------ZmHOX2a(1)<---------------AtSPL8     --------->ARR11(3)          ------ -----TOE2(3)       <------ZmHOX2a(1)   <---------------AtSPL3     --------->ARR14(2) <-----------RAV1(1)   tgtaaatctgggttaattgtgaggaggatatgattctatgttgttgtacggtacatgtagatattggcagaacttgatgcagtgcttgatgttggaggtg  16808900  Previous    Next  AGI:  At5g41960.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN62288.1) Range:  from: 16806942    to: 16808270    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g41970.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62930.1); contains InterPro domain Metal-dependent protein hydrolase (InterPro:IPR003226) Range:  from: 16808410    to: 16810485    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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