Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ---------ANAC46                       --------->YAB1                               --------->ATHB12 --->CCA1(2)                     ----------->GT1                                   <-------TEIL -->ARR14(2)    <------MYB83    <---------TOE2(3)                                <---------ARR14(2) ---ARR14(2)    <------MYB46(1) <---------TOE1(3)------>MYB83                    --------->ARR14(2) >LBD16        --------->MYB59  <---------YAB1   ------>MYB46(1)           <--------P         <------   tggtttggatttttagtttggttttggttatgttatggtaaaaataaaaccaaatgaaaaattgaattggataacaggttgcagattcatgggagtcttt  16806500                                                                               ----------->GT1                     <---------MYB52(1)                                    <-----------GT1            --------->ANAC58                                              <---------YAB1            --------->ANAC58                                            --------->YAB1            --------->ANAC46  --------->ANAC46                      <---------MYB52(1)            <--       <---------ANAC46 <------MYB46(1)                            <---------RAP2.6(3)           ----       <---------ANAC58 <------MYB83                               --------->LBD16    <---------ICU4       <---------ANAC58<---------AtMYB61                           ----------->GT1    <---------AHL20(2) ----DOF2----------->HVH21    <-----------GT1                    <---------LBD16     --------->AHL20(2)   agatggatggcttgacgcaattcgtttggtttacacaatttatgcgagagggaagagtgatgttttagccggtattatcaccggttaataaatacttcat  16806600               <----------DOF2              <---------ANAC58                  ------>ZmHOX2a(2)              <---------ANAC58                <---------ARR11(3)  ---------->ID1            <--------            <-----------GT1                   --------->ARR11(3) XXXXXXXXXXXXXXXXXXXX>MIR4239   <---------YAB1                           <---------YAB1  <---------AHL20(2)              <-------- -------AHL20(2)                          --------->YAB1   <---------AHL20(2)   <---------DAG2 ----->AHL20(2)<---------DAG2        <---------ANAC46      --------->AHL20(2)   <----------DOF2   ttaatatgactattttgcttttttatctgtagttttgtgatgtattatgatcttagcgaaatttttttgtcattttcaaacgctttttgggacccttttt  16806700                                                                  <---------ZAT18                            --------->ANAC55(2)                   <---------ZAT14                            <---------ANAC55(2)                <---------ZAT6                          <-----------GT1                    <---------ANAC58                      --------->AHL20(2)      --------->At4g35610 --------->ZAT18    <---------YAB1    <---------AHL20(2)    <---------ANAC58 <---------ANAC58 --DOF2              --------->AHL20(2)     <---------ANAC58 <---------ANAC46 -DAG2            --------->YAB1  <-----------GT1      <---------YAB1         ------->TEIL  ---------   cttattttcatcgaatacatttataaaattacatgtttaccaattgtcgtctgaattatccttgagtgtgaactactgtgtatgttcttgttgtaaaaga  16806800                                                                                                    -                                                                                             ------->GAMYB                                                                                            ---------                                                                                           <---------At5g28300                                                                                          <----------                                                       <-----------RAV1(1)                --------->MYB52(1)                                              --------->RAP2.6(2)                         <---------DOF5.7(2)                                         --------->ZAT14 --------->ALFIN1              <----------DOF2 ->DOF2           <---------LBD16<----------DOF2      --------->ARR11(3)  <---------YAB1--------->DOF5.7(2)   aaactccaaacatatactactacggacttgggaaactttttagtacagccgtattagatgttgggctaatgggcttataagtgtctaggctttaacggcc  16806900                                                    --------->LBD16                                             --------->LBD16                                            --------->HSFB2a(2)                                            --------->ANAC58                                            --------->ANAC55(2)                                  <---                                            <---------ANAC55(2)                                  <---                                            --------->ANAC58  --------->ANAC46                   <---                                           <---------LBD16<------ZmHOX2a(2)                      <---                                        <-----------HVH21--------->ARR14(2)               <------NtERF2         --------->LBD16       --------->TOE2(3)<---------ARR14(2)                      <---------ANAC58         ------>NtERF2         ------->GAMYB--------->LBD16--------->MYB46(3)           <---------ANAC46        --------->ANAC46      <------------AtMYB77<---------LBD16                       <---------ANAC58     <---------ARR14(2)     --------->ARR14(2)  --------->GLK1(2)        <---------At4g35610     <---     --------->ARR14(2)     <---------ARR14(2)  --------->ARR14(2)<---------ZAT2   --------->YAB1<--- --------->YAB1          --------->ANAC46 *TSS <---------GLK1(2)  --------->ZAT2   <---------ICU4==== -------->AHL20(2)  <----------DOF2  <---------ANAC58    <---------ARR14(2)     --------->YAB1 <----- >MYB46(3)          <---------DAG2   <---------ANAC58 --------->SPL7     --------->At4g35610  <------ -GT1--------->GLK1(2)   --------->ANAC55(2)<---------HSFB2a(2)--------->DEAR3(1)--------->ARR11(3)   cattaaaaatccgcctctctcgctttctcgtaaccgtagtcgtgtcccggaatccggacgatccaccgagctcgaagctcaaaaatcatggcgtctctgt  16807000                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2                                                                                     <---------At4g35610                                                                                     --------->At4g35610                                                                                   <------NtERF2        <---------GLK1(2)                                                          --------->DEAR4(2)        <---------ARR14(2)                                                         --------->ATERF1(1)        --------->ARR14(2)                                                         --------->RAP2.3(1)      --------->LBD16                                                             <---------RAP2.3(1) ---------->ARF1                                                                  <---------ATERF1(1) ------bZIP60(2)       <---------At4g35610                                        ------>NtERF2 ------O2         <----------DOF2       --------->ANAC46                         <---------DEAR3(1) ------ANAC58  ------>NtERF2            --------->REM1(1)                       --------->ATERF1(1) ------TGA1a  <---------ZAT18      --------->ANAC46                            <-----------HVH21 ------ANAC46 --------->LBD16      --------->ZAT6                      <<<<<<<<<TBF1--------->DEAR3(1) ------ANAC58<---------ANAC58   --------->ZAT14                     <<<<<<<<<TBF1--------->DEAR3(1) ============================bZIP_DOF  --------->ZAT14           <<<<<<<<<TBF1 <---------ATERF1(1) -- ------HVH21<---------LBD16  <---------At4g35610              <<<<<<<<<TBF1   --------->ANAC46     <- -----RAV1(1)<---------ANAC58--------->At4g35610         <----------DOF2      --------->O2 ------>ZmHOX2a(1)   cgtgtctcccgatttgcggactttcatcttccgcttcactctacaccaaggcccgactactttcttcttcttcttcttccccgtcgccgcttcctctagc  16807100                                           <---------ATHB12                                      --------->ANAC58       --------->ANAC46               --------->ANAC58   ===============================HOX2a_HOX2a            <---------CCA1(1)                      <----   ==================================HOX2a_HOX2a         <---------RVE1(1)                      -----   ------>ZmHOX2a(1)           --------->YAB1           <---------AHL20(1)                      <---- ------->ARR14(2)             <------ZmHOX2a(2)         --------->ARR11(3)          <----------DOF2 --------ARR14(2)          ------>ZmHOX2a(2)            <---------ARR11(3)      <----------DOF2 -----   ctatcctctacaaaaccctaagaaggtgatcgatcaaaactagcaatggttctctcaagatatttttctcaataactggttcctttctttgttttctcag  16807200                                                        --------->ANAC46                                                        --------->YAB1                                                        --------->ANAC58           <---------TOE1(2)                                                        --------->ANAC58          ------>ZmHOX2a(1)                                                    --------->AtMYB61            --------->TOE2(3)                                                    <---------ALFIN1          ------->TEIL                                                   --------->MYB46(3)         --------->ARR14(2)                                                  ------->TEIL           <---------ANAC46                                                 --------->ANAC46        <---------ANAC58        --------->ATHB12                       --------->ANAC58          <---------ANAC58 -----At4g35610                                --------->ANAC58         <-------TEIL   <-------TEIL ---->At4g35610                               --------->PCF2---------->DOF2   <---------ARR14(2) -----ZAT2                                   <------ZmHOX2a(1)------->GAMYB  <---------CCA1(2) ---->ZAT2       ----------->GT1        <-----------GT1 --------->ANAC55(1) --------->REM1(2)      <-   ctatgtagaaagattgagagagtaatttgcagagcggagttttcacaggacgcaccactcgtaacagcaattggtgcgtgtatcctaagttcatttgttt  16807300                                                                             <---------RAP2.6(3)                                                                             ------>NtERF2                                                                            --------->RAP2.3(2)                                                                            --------->DEAR3(1)                                                                            --------->RAP2.3(3)                                                                            --------->RAP2.6(2)                                                                            >>>>>>>>>AtERF-4                                                                            >>>>>>>>>AtERF-1                                                                            >>>>>>>>>AtERF-5                                                                            --------->ANAC46                                                                            >>>>>>>>>AtERF-2                <---------WRKY12                                            >>>>>>>>>AtERF-3     <------NtERF2                                                         --------->RAP2.3(1)     <-    ------>NtERF2<---------DOF5.7(2)                                       --------->ERF1       <----   --------->ALFIN1                                                       --------->At4g35610<-------   <---------DEAR3(1)         >>>>>>>>>TBF1                     --------->CCA1(2)       --------->YAB1  <---------MYB52(1)      <------ZmHOX2a(1)                    <---------ARR14(2)      --------->ICU4 --------->LBD16<---------WRKY45 >>>>>>>>>TBF1                 --------->ARR14(2)     <---------KAN4(2) --------LBD16  <---------WRKY38(1) >>>>>>>>>TBF1          <---------At4g35610<------NtERF2  --------   ttccggtggcgaaacgagtcaacgatgaggaagaagaagaagaaaactcagcgattgtgtcaacagatatgagattagccgccatgggaatcatcagctt  16807400  Previous    Next  AGI:  At5g41950.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO62921.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) Range:  from: 16802942    to: 16806742    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g41960.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN62288.1) Range:  from: 16806942    to: 16808270    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version