Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ----------->RAV1(1)                         <---------------AGL15                    <---------ZAT2                  --------->ANAC46                    --------->At4g35610      <---------YAB1                      --------->YAB1              --------->DAG2         <---------ARR11(3)                   <---------ICU4             ---------->DOF2         --------->ARR11(3)                  <---------YAB1   <---------ARR14(2)    --------------->AGL15--------->YAB1           <---------ICU4       ---------   --------->ARR14(2)   --------->REM1(1)   --------->ARR11(3)         --------->YAB1     --------->YAB1  <---------CCA1(2) <---------At4g35610     <---------ARR11(3) --------->AtLEC2 <---------YAB1   acacatatctgttaataaagtcagctacaacaaatagaaggtctaatatcatagacgataccaccatgaaaaatcatcatttctcatagtattcatgaaa  16798800                                                        <---------AHL20(2)             <---------AHL20(2)            <---------ZAT6      ---------->ID1 >AtLEC2   --------->ICU4                ----------->GT1--------->AHL20(2)--------->TOE2(3)   aacatcaagtggaatttttatgagaccatcaacttcttacatttagtgaaactggtttttaatttgttccttcaattcttaaatcaaatctagaattcat  16798900                                ---------->ID1                                <---------CCA1(2)                            <---------ANAC55(2)                                     --------->ANAC58                            <---------ANAC58                                        --------->ANAC58                            --------->ANAC55(2)                                   ---------->DOF2                            <---------ANAC58                                   <---------ZAT18                         --------->ARR14(2)                         ---------->DOF2 -----------------                         <---------ARR14(2)           <-----------GT1   --------->ARR11(3)                      <---------TOE2(3) <-----------GT1     --------->YAB1    <---------ZAT6                     <---------LBD16<----------DOF2--------------->AtSPL8  <-----------------------TaNAC69(2)        --------->GLK1(2)<---------ARR11(3)        <---------------AtSPL8<---------REM1(1)---------->DOF2       <---------GLK1(2)<------ZmHOX2a(1)     <----------DOF2   ---------->DOF2--------->ZAT18   acaacttgagattcttagaaaattcaggatacttgtctcttttttcttctttttttgtacaattttaaaagaaagatgtagtgcaaaagccaaaaatcga  16799000                                                                      --------->ALFIN1                                                                   --------->ALFIN1                                                                --------->ALFIN1                                                               --------->ALFIN1                                                              <---------ANAC46                                                              --------->ALFIN1                                                             --------->ATERF1(1)                                                             --------->ALFIN1                                                            --------->ALFIN1                                                           --------->ATERF1(1)                             <---------AHL20(2)            --------->ALFIN1                             --------->AHL20(1)           --------->ATERF1(1)                             --------->AHL20(2)           --------->ALFIN1    <---------ANAC46                          --------->YAB1                 --------->ATERF1(1)  --------->ALFIN1                        --------->AHL20(2)              --------->ALFIN1     --------->ALFIN1                       --------->YAB1                  <---------ANAC46 --------->ALFIN1                      --------->AHL20(2)             <---------LBD16 <------ZmHOX2a(1)              -             <---------MYB52(2)              <----------DOF2--------->ATERF1(1)    ---------->DOF2  < ------->ANAC81--------->MYB52(1)      --------->MYB46(3)--------->ALFIN1  --------->ALFIN1    <-----   aaacaaaaaccaaaaactaacaaaataaaaataaaatgacaaccattcttttttttggggggggggggggaggaggggagggggggaaagaagaaagaat  16799100                                 ------------>CBF                               --------->PCF5                               --------->ZAT18                               <---------PCF2                               --------->TCP11(2)                               --------->TCP16(1)                               --------->TCP20                               --------->TCP15(1)                              <---------TCP23                              <---------TCP16(2)                              <---------TCP15(2)                     ------------>CBF  ------>MYB83               <---------ZAT18                       <---------ICU4  ------>MYB46(1)           --------->ALFIN1              <---------DAG2  --------->MYB52(1)     --------->DAG2                   <----------DOF2  *TSS -------->MYB46(3)      ---------->DOF2      <-----------GT1       --------->YAB1             <------ZmHOX2a(1) ---------MYB59      --------->AHL20(2)  --------->HSFB2a(2)      <---------ATHB12         <---------LBD16 ----KAN4(2)        --------->AHL20(2)   <---------HSFB2a(2)  ------------>CBF             <---------   gacccaactgtatgaaggcccattaaaaaagtgggcccaatttctataaacgaccttcgactttttcaataatcaattttcatccaattcaactcaggaa  16799200                                                                                             <-------                                 --------->ARR11(3)                                          <-------                                <---------GLK1(1)                                            --------                                --------->GLK1(1)                                      <---------TOE2(3)                        --------->At4g35610                                          ----------->HVH21     --------->YAB1   --------->YAB1                                                <---------WOX13(1)    <---------YAB1  --------->GLK1(2)                                      --------->ANAC46  -------- --RAV1(2)<-----------GT1   >>>>>>>>>TBF1  --------->At4g35610     <---------YAB1<---------YAB1   attgctatgattttactctgagaatcagaagaagaaatctcggtgagcaaaatccctagttttgggatgatgtttccacgactacgattgacgaaggtct  16799300                                                              <------MYB83                                                              <------MYB46(1)                                                              <---------MYB46(3)                                                          <---------ANAC46                                                          <---------DEAR3(1)                                                         --------->ATERF1(1)                                                         <------NtERF2                                                        <---------ORA47(2)                                                        <---------RAP2.3(1)                                                        ------>NtERF2                                                        <---------RRTF1(1)                                                        <---------ERF1                                                        <---------DEAR4(2)                                                        <---------ATERF1(1)                                                       <---------RAP2.3(3)                                                       --------->DEAR3(1)                                                       <---------DEAR3(1)                                                       <---------RAP2.3(2)                                                      --------->DEAR4(2)                                                      --------->ATERF1(1)                                                      --------->DREB2C(1)                                                      <------NtERF2                                                      --------->At4g35610                                                      <---------At4g35610                                                     <---------RAP2.3(1)                                                     ------>NtERF2                                                     <---------ATERF1(1)                                                     <---------RRTF1(1)                                                     <---------RAP2.6(1)                                                     <---------ERF1                                                     <---------DEAR4(2)                                                     <---------ORA47(2)                                                    --------->DEAR3(1)                                                    <---------DEAR3(1)                                                    --------->ALFIN1                                                    <---------RRTF1(3)                                                    <---------ANAC46                                                    <---------RRTF1(2)                                                    <---------RAP2.3(3)                                                    <---------ATERF1(2)                                                    --------->ATERF1(2)                                                    <---------RAP2.6(2)                                                   <------NtERF2                                                   --------->ATERF1(1)                                                   <---------ABI4(1)                                                  <---------DEAR4(2)                                <                                                  <---------ATERF1(1)                             <--                                                  <---------RAP2.3(1)                            <---                  <------NtERF2                  --------->DEAR3(1)                              ----                 ------>NtERF2                   <---------DEAR3(1)                             <----                 --------->LBD16                 <---------RAP2.3(2)                           ------          --------->YAB1                        --------->At4g35610                            <-----          <---------ICU4                 <---------DEAR3(2)  <---------AtMYB61                <------         <------ZmHOX2a(2)             <------NtERF2<---------RAP2.3(2)                       <------         <---------ATHB12             ------>NtERF2--------->RAP2.3(1)                        <------        <-----------HVH21   ------>ZmHOX2a(2)--------->At4g35610                             <-------      --------->LBD16     --------->ARR14(2) <---------ZAT2<-------GAMYB                 <---------AtMYB61     --------->LBD16      <---------ARR14(2) <---------At4g35610                     <---------ANAC58 --ARR11(3)     <---------LBD16      ----------->HVH21--------->RAP2.3(1)            <---------ANAC58 --ARR14(3)     --------->LBD16      --------->DEAR3(1)<---------ANAC46              <---------ANAC46 ->ARR14(3)    <---------LBD16      --------->DEAR3(2)<---------ABI4(1)            <---------MYB46(3) ->ARR11(3)  --------->DEAR3(1) <----------DOF2 <---------At4g35610           <---------ZAT14<-------   tcttctccccgatcatcgccgggaaatggatcgtctttgccgacggtagcagcggcggcggcgttggtagaaatggctactacggtggattgtggtcgtc  16799400  <---------MYB52(1) <-------GAMYB                                        <---------DEAR3(1) <---------RAP2.6(3)                     <---------MYB52(1) ---------MYB46(3)                      <-----------HVH21      <-----------GT1 ----NtERF2                             <-----------TGA1<---------MYB52(1) ------DEAR3(2)                        --------->ANAC46<---------ATERF1(1)                          - -->NtERF2                  <-----------HVH21     --------->ATERF1(1)                              <- -----DEAR3(1)             <-----------RAV1(1)   <---------ATERF1(1)                    --------->ANAC46 --->ATERF1(1)           <---------At4g35610    <---------ANAC58                        --------->ANAC58 -NtERF2                 --------->At4g35610    <---------ANAC58<---------At5g28300     --------->ANAC58 ---SPL7  >>>>>>>>>>>>>>>>>LFY         --------->DEAR3(1)   <----------DOF2     <------MYB83      --- -----HVH21        <---------MYB46(3)<---------At5g28300<------NtERF2           <------MYB46(1)   --- ---ATERF1(1)      <------MYB83<---------At4g35610--------->ALFIN1--------->DEAR3(1) <---------REM1(2) --DEAR3(1)        <------MYB46(1) ----------->HVH21  --------->DEAR3(1)       <---------TOE2(2)  <-- --MYB46(3)    <-----------RAV1(1)<-----------HVH21  --------->ATERF1(1)       <---------TOE1(2)  <--   ggccgttattccttccaatgttggtttagctgtcgctgtcaccgtcatggccgtggccgtcgctttcaccgtctactctcgtaggtatacacacaaaaac  16799500                                            <---------ANAC58                                     <---                                            <---------ANAC58              <------MYB83           <--- ----->ZmHOX2a(2)                    --------->ANAC58                     <------MYB46(1)    <------MYB83 -----ZmHOX2a(2)                     --------->ANAC58                    --------->MYB59     <------MYB46(1) ------>ARR11(3)                ---------->DOF2               --------->MYB59                <------- ------>ARR14(2)             --------->ANAC58    --------->ZAT18     <---------AHL20(2)    <---------WOX13(1) -------ARR14(2)             --------->ANAC58    <---------ZAT18  ----------->GT1        --------->ATHB12 -------ARR11(3)           ---------->DOF2--------->ICU4--------------->AGL15           <---------YAB1   gatctgatttatgttctaatcgatttcttcaaagcaaagaagcaatgcttgttcactacttagttaagtagttatttggtatccatagatttgattggtt  16799600                                                                                 --------->ATHB12                                                                        <------MYB46(1)                                                                        <------MYB83                                                                       --------->MYB59          <-----------GT1                     <---------TOE2(3)        --------->MYB46(2)     <----------DOF2                        <---------MYB52(1)       <---------MYB52(1) <---------ANAC58                          <----------DOF2         --------->MYB111(1) <---------ANAC58                  <-----------HVH21               --------->MYB52(2) ------ANAC58                     ------>ZmHOX2a(2)                --------->MYB46(2)   --------->ARR11(3) ------ANAC58                   <---------ARR14(2)       <---------GLK1(1)      <---------YAB1 >>>>>> --MYB46(3)                     --------->ARR14(2)<-------TEIL   <---------MYB52(1)<---------WOX13(1)   cttgcttctttgttacctcaccaattcgaggctggatcgtcatgcctttaggttcgaagaattctctgttagttaggttattgtgattgagttcttggtc  16799700  Previous    Next  AGI:  At5g41940.1    Description:  RabGAP/TBC domain-containing protein. similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62920.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 16799175    to: 16802804    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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