Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------ICU4  <---------YAB1  --------->ICU4                                                              <---------AHL20(2) ----->ANAC55(2)                             --------->TOE2(3)                --------->AHL20(2) ----->ANAC58                              <-------TEIL                  <-------TEIL ------ANAC55(2)             --------->AHL20(2)                      --------->ARR11(3) ----->ANAC46                <---------AHL20(2) <---------AHL20(2)   <---------ARR11(3)       ------- ----->ANAC58   <---------DAG2            --------->CCA1(2)  --------->ANAC55(2)             <------- ----->ANAC55(1)<----------DOF2          <---------ARR11(3)  <---------ANAC55(2)   --------->YAB1  -- ------->GT1<---------ATHB12<---------WOX13(1) --------->AHL20(2) <---------WOX13(1)         --------   cgttataattcccaattactttattatctgattaattcaccaagatacattaaatctaaaattatgtgatagatattcatataaatcatattggattatt  16750600                                       --------->ANAC46                        ----------->GT1                                   <-----------GT1                            --------->DAG2 -->KAN4(2)                   ------>ZmHOX2a(1)                              ---------->DOF2 --KAN4(1)                   --------->TOE2(3)                     <---------AHL20(2) --------->RAV1(1)           --------------->AGL15                 --------->AHL20(2) ->KAN4(1)                <-----------GT1                          --------->AHL20(1)   ccaacaaaaaaaaaactcttaaaatttgtttccttatttacaaacaatacattactgaaaatttctaaataaaatatcaaaaagtaatttcaaaaccttg  16750700                       <-----------GT1                   <---------YAB1                 <---------AHL20(2)                <---------YAB1               <---------AHL20(2)              ---------->DOF2            <---------AHL20(1)              --------->ANAC58            --------->AHL20(1)              --------->AtLEC2        <---------AHL20(2)                  --------->ANAC58  --------->DAG2       --------->AHL20(1)         <---------ARR11(3)         ---------->DOF2       --------->AHL20(2)         --------->GLK1(2)       --------->ANAC58       <---------AHL20(2)        --------->RVE1(1)        --------->ANAC58                    -------       <---------AHL20(1)      --------->AHL20(2) ---------->DOF2                         <------ZmHOX2a(1)   ttttgtcaatttaatatttttatttttacaaaaaaaaatctgaaacatgcaaagaagcacaagtaaagtacaagtggaaatgtatgaaaataggaatcat  16750800                           --------->At4g35610                          --------->GLK1(2)                   --------->ATHB12                   -------->HAHB4                   --------->YAB1                  <---------YAB1                 <---------TOE2(3)               <---------AHL20(2)              <---------AHL20(1)              <-----------GT1              --------->AHL20(2)    ----------->GT1          ---------->DOF2              --------->AHL20(1)    --------->ANAC58     --------->LBD16              <---------AHL20(2)    --------->ANAC58    --------->LBD16          <---------AHL20(2)       --------->DAG2      --------->HSFB2a(2)      --------->AHL20(2) <---------GLK1(2)   <---------AHL20(2)                                    <-      <---------AHL20(2)<------ZmHOX2a(1)   --------->AHL20(2)     <------ZmHOX2a(1)               -- -->YAB1  --------->AHL20(2)      ---------->DOF2<-----------GT1 ----------->GT1        <----------DOF2   aaaactaattttttaatttaatgataggaatctgaaaaaagcaaaattttatcacatcccgaataaagaggaaaatgcaaaatatgtctccttttctcac  16750900                                                                               --------->AtMYB61                                                                               <---------ALFIN1                                   <---------TOE2(3)                        <---------ALFIN1                           ------->GAMYB                                   --------->MYB46(3)                          --------->ANAC58       --------->TOE1(3)         --------->RAP2.3(3)                          --------->ANAC58     --------->ICU4              --------->DEAR3(1)      --                        --------->MYB52(1)     <---------ATHB12           --------->ATERF1(1)      <-                     --------->ANAC58   ---------->DOF2             --------->YAB1        --------->ZAT14                     --------->ANAC46 <---------YAB1           --------->ZAT2 --------->O2<---------ZAT18      <--------P     --------->ANAC58--------->TOE2(3)         --------->At4g35610        <---------ZAT14 --------YAB1<----------DOF2      <-----------GT1--------->TOE2(3) <---------ATHB12 <---------ALFIN1 --------->HVH21---------->DOF2 --------->AHL20(2)        --------->YAB1 --------->PCF2--------->DEAR3(1)   tatgacaggttgtttctttaaagaagcaacggaatttaacattatagcaaacattaactatcaccagctatcatgcgcccacctctccaccgtgctctcc  16751000                                                                                      <---------ETT(1)                                                                                   --------->ARR14(2)                                                                                  <---------ALFIN1                                                                                <---------HSFB2a(2)                                                                                --------->HSFB2a(2)                                                                             ------>ZmHOX2a(1)                                                                           ==========================                                    --------->HSFB2a(1)                    ------>ZmHOX2a(2)       <-                                    <---------HSFB2a(1)                   ===========================                                    <---------HSFC1(2)                    <------ZmHOX2a(2)       ---                                   --------->ARR14(2)                    <---------ARR14(2)     <----                                   --------->ARR11(3)                    --------->ARR14(2)     <----    <---------YAB1                 --------->GLK1(2)                     <---------GLK1(2)      <----  --------->YAB1                   <-----------ARR10                  <---------ANAC55(2)     -------  <---------ICU4               --------->HSFB2a(2)                    --------->ANAC55(2)     <------ <---------YAB1       --------->WOX13(1)      <----------DOF2       --------->MYB52(1)----------->HVH21 *TSS<---------ICU4 <---------ATHB12--------->HSFC1(2)             ----------->HVH21 --------->DEAR3(2) ------->YAB1   <---------AHL20(2) <---------ARR14(2)       <-------TEIL <-----------ARR10   <------- --------ICU4   --------->AHL20(2)<---------GLK1(2)--------->ZAT6  ----------->TGA1<---------ARR14(2)   atcatcatcattccatatataaatcattcacttgtagaatcttcttctctttcacactaaaattcatcgatgacggatcctcccagacccgacccgtttc  16751100                          --------->ZAT14                          --------->ABI4(2)                          <---------ZAT18                          <---------ZAT14                        <-------PIF5                                              <---------------AGL15     --------->ANAC46   ------->PIF5                                              --------------->AGL15 ====HOX2a_HOX2a        <---------MYB52(1)                                       ----------------->AGL3 ----------HVH21       <---------DEAR3(2)                                        <-----------------AGL2 ====HOX2a_HOX2a       --------->LBD16                                      --------->WOX13(1) --->ZmHOX2a(1)       <---------DEAR3(1)                              --------->YAB1 -----ANAC58         <------NtERF2                ----------->GT1    <---------YAB1              <--- -----ANAC46        <---------RAP2.3(1)          --------->DAG2    --------->YAB1----------------->AGL2 -----ANAC58        ------>NtERF2            --------->YAB1    <---------AHL20(2)<-----------------AG -->ARR14(2)       <---------DEAR3(1)       <---------ATHB12  <---------ARR11(3) ----------------->AGL1 ---ARR14(2)       --------->DEAR3(1)     --------->WOX13(1)  <---------AHL20(1) <-----------------AGL1 --MYB52(1)        --------->ANAC46    ------>ZmHOX2a(1)     <---------CCA1(2)   <-----------------AGL3   ctgttacccgactcgattccgacgccggtgctctcttcgtcctccaatcaaaaggttaaacccatatatttatgatatcaatctccaattttggaatttt  16751200                                          --------->GLK1(1)                                          <---------GLK1(1)                                         --------->ARR14(2)   <---------MYB46(3)                                         <---------ARR14(2)   <-----------RAV1(1)                                     <---------LBD16        <-------GAMYB                                   --------->ANAC58        <---------MYB46(3)                                   --------->ANAC46      <------NtERF2                     <-------MYC3                                   --------->ANAC58     ------>NtERF2      <---------ARR11(3) <------                            <---------MYB46(3)      --------->MYB46(3)----------->HVH21    ------->MYC3                           --------->ALFIN1       --------->MYB52(1) --------->SPL7    --------------                           <---------AtMYB61    <---------MYB52(2)<------MYB83  <-----------GT1  ----            --------->AHL20(2)  <---------SPL7 <---------At4g35610<------MYB46(1)      -------------- --------->ATHB12  <-----------RAV1(2) --------->LBD16 <---------DEAR3(1)  --------->ARR11(3) <------ --------GT1<---------AHL20(2)  <------NtERF2  --------->At4g35610<---------MYB46(3) <-----------GT1   aactgatttgagaattaattctcaggcgagtggtggcacgccggatttcatctaacgacggcgattgttggtccgacgatattgacattaccatatgcgt  16751300                    <---------TOE1(3)                <-------GAMYB               <---------MYB46(3)            <------MYB83 --------->MYB52(2)   <------ZmHOX2a(1)<---------TOE2(3)                                                           ----- ---ANAC58  <------MYB46(1)                                                          <-------TEIL --->AG    --------->ALFIN1                            <----------DOF2           <---------TOE1(3) ----->REM1(2) --------->MYB55(2)                    --------->MYB52(2)          <---------TOE1(2) --->AGL1<------ZmHOX2a(1)                         <---------MYB52(1)            <---------TOE2(3) ---ANAC58 <---------AtMYB61                     ----------->GT1    <-----------GT1 --------->ARR11(3)   ttagaggattaggatggtggttagggtttgtttgtttaacgacgatgggactcgttactttctacgcttattacctcatgtctaaggttcttgatcactg  16751400              <-----------HVH21              ------>NtERF2             <---------ATERF1(2)             --------->ATERF1(2)             --------->DEAR3(1)             --------->bZIP60(1)             --------->RAP2.6(2)             --------->ANAC46             --------->O2             --------->RAP2.3(2)             --------->RRTF1(3)             --------->RRTF1(2)             --------->RAP2.3(3)            --------->RAP2.3(1)          <------NtERF2            <------NtERF2               ------>NtERF2            --------->RRTF1(1)          <---------ATERF1(1)            --------->ERF1              --------->LBD16            --------->ATERF1(1)         --------->ABI4(1)           <------NtERF2               <---------DEAR3(1)           --------->At4g35610         <---------ATERF1(2)           ------>NtERF2               --------->ATERF1(2)           <---------At4g35610         --------->RAP2.3(2)           <---------ATERF1(1)         --------->RAP2.3(3)          <---------DEAR3(1)           --------->DEAR3(1)          --------->RAP2.3(2)         --------->ERF1          --------->RAP2.6(2)         --------->DEAR4(2)                                    <--------          --------->DEAR3(1)          --------->ATERF1(1)                                   <--------         --------->DEAR3(2)           --------->RAP2.3(1)                                   =========         --------->ATERF1(1)         <---------ATERF1(1)                                    ---------         --------->SPL7             --------->ANAC46                                        <--------         --------->RAP2.3(1) --------->HSFB2a(2)                                           <---------ANAC58        <---------ATERF1(1)  <---------HSFB2a(2)                                           <---------ANAC58        --------->ATERF1(1)  --------->LBD16                                               <---------        ------>NtERF2       --------------------->WRI1                          --------->AHL20(2)       <---------ATERF1(1)  <---------ANAC46                      --------->RVE1(1)        <---------       --------->LBD16      --------->HSFB2a(2)                  --------->GLK1(2)   <---------AHL20(2)      <---------RAP2.6(2)   <---------HSFB2a(2)                  --------->ARR11(3) --------->AHL20(2)     <---------LBD16       <---------LBD16                       <---------ARR11(3) <---------AHL20(2)   --------->GLK1(2)     <---------ARR14(2)                     <---------GLK1(2)<---------AHL20(2)   --------->ARR14(2)    --------->ARR14(2)               --------->WOX13(1)    --------->ICU4   <---------ARR14(2)   <---------MYB52(1)--------->DEAR3(1) --------->YAB1 <------------------------ANAC81 ---->At5g28300<------NtERF2<---------LBD16             <---------YAB1   <----------DOF2   <---------   tgaaaaatccggccgccgtcacatccgtttccgggaactcgccgccgatgttcttggtatcattcaaaatctcttctttgtatttattaatttgcttttt  16751500  Previous    Next  AGI:  At5g41800.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT1G08230.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO65827.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 16751001    to: 16753219    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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