Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------DAG2                                                                                <----------DOF2                                                                               <---------ANAC58                                                                               <---------ANAC58              <---------bZIP60(2)  <---------ANAC46                   <---------ANAC58    <----------DOF2               <---------TOE2(3)                   <---------ANAC58<-----------RAV1(1) -->DOF2 <---------AtLEC2   <---------YAB1                 <-------TEIL  --------->ATHB12       <----   atagagcttttgcatgaagtggtttctctgatcatttacgttgaagcatttactcactagatgcaaaatgtttcttgatttgctttttttgttggatttt  16734800                                                 --------->At4g35610                                                --------->GLK1(2)                                                <-----------ARR10                                                --------->ARR14(2)                                      --------------->AGL15                                  <---------ANAC58            <---------AHL20(2)                                  <---------ANAC46           --------->AHL20(2)         <---------MYB46(3)                    <---------AHL20(2)===============================================================              <---------DAG2      <---------ANAC58 ----------->HVH21               <---------YAB1              <----------DOF2<-----------RAV1(1)<---------ARR14(2)          --------->TOE2(3) -------GT1<-----------GT1  <---------YAB1     <---------GLK1(2)           --------->ATHB12     <----   tctgtccaagtttttgctttatattatgtcattgttgcttctatgtttagaatctgacctctattaaatgtgaaacttcattagtatttttggttactat  16734900                                              ----------->GT1                                         ------>MYB46(1)                                         ------>MYB83                                       <---------------AGL15                                       --------------->AGL15           --------->YAB1             <-----------------AGL3                       <----------DOF2        <-------GAMYB                 --------->ANAC58                            <---------ANAC46       <---------ANAC46               ----------------->AGL2                      <---------ANAC58    <----------DOF2                   ----------------->AGL3                      <---------ANAC58  <----------DOF2              --------->MYB52(2)  <-----------GT1            <---------ANAC58 =======================================================MADS_MADS             <---------ANAC58    --- -------RAV1(1)     <----------DOF2   --------->ANAC58  <---------MYB52(1)---------->DOF2     -------   gttgctctttcgttgataacaactttgaaatgttagtcgcaccaaatttagtaaaaccgttttcttatacatgttacaaagcttgcttgaaggctataac  16735000                              <---------ARR14(2)                 --------->ANAC58       ---------->DOF2        --------->ARR14(2)            --------->YAB1  <---------ARR11(3)   --------->AHL20(2)          <---------RAP2.6(2)  --------->ARR11(3)   <---------AHL20(2)         --------->RAP2.6(3) ------->DOF2   <-----------GT1                   <---------At5g28300 <---------ATHB12 -->YAB1   ----------->GT1    <---------GLK1(2)  <-----------GT1 --------->ANAC58                <---   aaaagatttcaaagggtttaacaaattaaacagatactaaatttgtgtttattacggcccattaagaacccaattaagagcgatattgggctaagactga  16735100                                    --------->WOX13(1)                                  ------------>CBF                             --------->TOE2(3)                  <---------At5g28300                                  ---------->ARF1          <-----------GT1   --------->YAB1  <---------ANAC55(2)    <---------ANAC58             <---- --------->AHL20(2)    ----------------->AGL3                      <---------ANAC58     ------------- <---------AHL20(2)<---------RAP2.6(2) --------->YAB1   <---------ANAC58       --------->YAB1   <---- ------RVE1(1)    --------->RAP2.6(3) <---------ATHB12  <---------ANAC58  ------------>CBF <---------   tattttaatattaaacctattacggcccattaatagcccaatcaatatgtaaacatatgcgtcttcgttccatgtctccaatcttatttcttcttaccct  16735200                                                               --------->HSFB2a(1)                                                              --------->ICU4                                                         --------->RAP2.6(2)                                                         ------>NtERF2                                                        --------->ATERF1(2)                                                        <---------ATERF1(2)                                                        <---------DEAR3(1)                                                       --------->ATERF1(1)                   --------                          --------->ANAC58            <---------ATERF1(1)    --------->TOE2(3)      -                        *TSS                          ------>NtERF2          --------->TOE1(3)  -----                        ---------->DOF2--------->At4g35610  ---------->DOF2------->TEIL      --------                    --------->LBD16    <---------At4g35610<------NtERF2    <---------TOE1(2) --------              <---------GLK1(1)        <---------ZAT2 <---------RAP2.3(1)  --------->SPL7    --------              --------->GLK1(1)        --------->ZAT2 --------->LBD16    <---------SPL7      <------- ------DOF2  --------->ARR14(2)    --------->LBD16  <---------LBD16     ------>ZmHOX2a(2)   <-------- -->AtSPL8 --------->LBD16--------->ANAC58        <---------SPL7<---------GLK1(2)       ----------->HVH21 -----DAG2--------->HSFB2a(2)  --------->ARR14(2)<---------ANAC58      <------ZmHOX2a(2)--------->ANAC46 --GT1    <---------HSFB2a(2)  <---------ARR14(2)<---------ANAC58--------->GLK1(2)   <-------TEIL   -   tttttccaaaatccagaaaccccagagaaagcaaaaccgcgagctctcatggcttccggcggcaaagattccgatcgtaccttagggtacatgacacgga  16735300                                                      --------->DEAR3(1)                                                     <------NtERF2                                                     --------->ATERF1(1)                                                     --------->RAP2.3(1)                                                    ------>NtERF2                                                    <---------ATERF1(1)                                                    <---------RAP2.3(1)                                                   --------->RAP2.3(2)                                                   <---------DEAR3(1)                                                   --------->DEAR3(1)  <-------TEIL                                    --------->RAP2.3(1) --------->CCA1(2)                                --------->ATERF1(1) ->ANAC58                 ------>MYB83            --------->RAP2.6(1) -------->ARR11(3)        -------->P              --------->RRTF1(1) ----->DOF2               ------>MYB46(1)         --------->ERF1              <---------RVE1(1) ->ANAC46               <---------MYB59          <---------ATERF1(1)         <---------ARR11(3) ->ANAC55(1)          <---------ARR11(3)         --------->LBD16             --------->ARR11(3) ->ANAC58   --------->ANAC58                     <---------RAP2.3(1)    --------->MYB52(1) --ANAC55(2)--------->ANAC58                    <---------DEAR3(1) ------->GAMYB                   -- -LBD16  --------->WRKY18(1)    <-----------HVH21------>NtERF2    --------->MYB46(3)              <-- -------->ARR11(1)    --------->ARR11(3)       <---------LBD16  --------->MYB52(1)      --------->GLK1(2)   aagatacagaagtcaagcttccaagacctactcgtgtcaagaacaaaactccggcgccgattcaaataactgccgaacagatattaagagaagctcgaga  16735400                   --------->SPL7               <-------TEIL               =============HOX2a_HOX2a               ------>ZmHOX2a(2)              <------ZmHOX2a(2)              ==============HOX2a_HOX2a             <---------ARR11(3)             --------->ARR14(2)             <---------ARR14(2)                                            <------NtERF2             --------->ARR11(3)                                           --------->LBD16             --------->AGP1                                              --------->DEAR3(1)        <-            --------->GLK1(1)                                          --------->LBD16             --           ----------->ARR10                                           ------>NtERF2              <--       --------->ZAT2------>ZmHOX2a(1)                        --------->ZAT14                    ----       <---------At4g35610--------->ANAC58                    <---------ZAT14 ---------->DOF2    <---       --------->At4g35610--------->ANAC46           <----------DOF2<---------ATERF1(1)          <---      --------->GLK1(2)   --------->ANAC58         <---------At4g35610--------->ANAC46           ---- ------->CCA1(2) <-----------HVH21                 --------->At4g35610--------->DEAR3(1)         <--- --------ID1<---------GLK1(1)                 --------------------->WRI1<---------LBD16        ------   gagacaagaagctgagatccgtcctcccaagcaaaaaatcactgattccactgagctttccgactacagactccgccggagaaaggaatttgaagaccag  16735500      --------->LBD16     <---------ANAC46                                                              --------->ALFIN1 <-----------HVH21                                                           <---------HSFB2a(2) ------TEIL                                                              ------->PIF5 ---->ZmHOX2a(2)                                                         <-------PIF5 ----ZmHOX2a(2)                                                          ------->MYC3 ----->AGP1                                                              <-------MYC3 ------ARR11(3)                                                          <-------MYC2 ------GLK1(2)                <-----------HVH21                          ------->MYC2          ------ ----->ARR14(2)  --------->KAN4(1) --------->ARR14(2)                  ------------>OsbHLH66   ------ ------ARR14(2)  <---------HSFB2a(1)    --------->ANAC46    ---------->DOF2  --------->HSFB2a(2) ----->ARR10    <---------KAN4(2)  <---------ARR14(2)<-----------HVH21<------------OsbHLH66    ------   atccgtcgcgcgagatggaacattcaagtttgggtcaaatacgctcaatgggaagagtcacagaaagattacgctcgtgctcgaagtgtttgggaacgag  16735600                                                  --------->HSFB2a(2)                                        --------->ANAC58          <---------YAB1             <---------ARR14(2)      <------ZmHOX2a(1)    <----------DOF2        <---------HSFB2a(2)                             <-- --->ANAC46             --------->ANAC58--------->ANAC46                                       ====== --->ANAC58             --------->ANAC58--------->ANAC58                       <---------HSFB2a(2)<-- --->ANAC58     <------ZmHOX2a(1)    --------->ARR14(2)                 <---------ZAT14        ------   ccatagaaggagattataggaaccatacgctttggctcaaatacgcagagttcgagatgaagaacaagtttgtgaacagtgcgagaaacgtttgggatcg  16735700  Previous    Next  AGI:  At5g41770.1    Description:  crooked neck protein, putative / cell cycle protein, putative. similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT3G13210.1); similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT5G45990.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ82520.1); similar to hypothetical protein OsI_018611 [Oryza sativa (indica cultivar-group)] (GB:EAY97378.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81550.1); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Range:  from: 16735224    to: 16738450    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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