Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ATHB12                                                  --------->AHL20(2)                                                  <---------AHL20(1)                                                  --------->AHL20(1)                                              --------->AHL20(2)                                              <---------AHL20(2)                                           ----------->GT1                                           --------->YAB1          <-----------GT1                                          <---------YAB1          <-----------GT1                                    <---------ANAC58        --------->MYB52(2) -------->GLK1(2)                   <---------ANAC46       <--------P                              <- ---------ARR11(3)                  <---------ANAC58      <---------MYB52(1)                <-------- -------->ARR11(3)           --------->AHL20(2)   <---------AHL20(2)                        <-------- --ZAT14         <----------DOF2  --------->ARR11(3)   <---------LBD16  <-------TEIL        ---------   aaaatctatacaaactcttcttttttttaaaaaaaatgtcttgtatgataaatttattgcggtagtttttaacattcgtctattgttcttgcagtgaact  16723700     ===============================HOX2a_HOX2a     ------>ZmHOX2a(2)    ================================HOX2a_HOX2a    <------ZmHOX2a(2)   --------->ARR14(2)                                                                       ---------   --------->ARR11(3)                                                                      --------->REM1(1)   <---------AGP1                                                                     --------->AtMYB61   --------->AGP1                                                                    --------->MYB46(3)   <---------ARR11(3)                                                                <---------MYB55(2)   <---------ARR14(2)        ------>ZmHOX2a(1)       --------->AHL20(2)             -------->P  <---------CCA1(2)         --------->TOE1(3)        <---------AHL20(2)            xxxxxxxxxxxxxxxxxx --------At4g35610          --------->TOE2(3)        --------->AHL20(1)          --------->At4g35610 -ZAT18  --------------->AtSPL8                      <---------AHL20(1)         ------->GAMYB -ZAT14  --------------->AtSPL3                ----------->GT1                  --------->ANAC46 >ZAT14<-----------HVH21<---------CCA1(2)    <----------DOF2                  xxxxxxxxxxxxxxxxxxxxxxx   catcagatctgtcagtacatctatttgtatccttagaacccttgcaactttgtaataaatttttcaactggagtagtagtaacagcaaccactacatcaa  16723800      ---------->DOF2                                                       ----------->GT1   <------ZmHOX2a(2)                                                      ---------->DOF2  <---------ARR11(3)                                                    --------->ANAC58  --------->ARR11(3)                                   ---------->DOF2  --------->ANAC58 >TOE2(3)     <---------YAB1                      <-------TEIL <---------ANAC46 xxxxx>smallRNA(si3)<----------DOF2      --------->ANAC58      <---------ANAC58              <------ZmHOX2a(1) >smallRNA(fl3)  ------->TEIL            --------->ANAC58      <---------ANAC58      --------->TOE2(3)   tggagatcaaaagactatgaaactttataaaaaaaaaaaccacaagcctacatacataaaagatggcttaaaacaagaaagtagaaacattagtaggaat  16723900                                       <---------ANAC58                                       <---------ANAC58                                 --------->AHL20(2)                       --------->DAG2<-----------GT1                      ---------->DOF2<---------AHL20(2)               --------->ATHB12  <---------AHL20(2)          <---------AHL20(2)    <---------AHL20(2)    --------->ZAT14           ---------->DOF2          --------->AHL20(2)    --------->ICU4     <---------ANAC55(2)      ---------->DOF2   aacttaaaacatttaaatgatttgaaaagcagaaattattttcttgttgaattaagtaaactcaaactccagcgtttgcaaagaaagtttgttttttgat  16724000                                  --------->YAB1        --------->CCA1(2)                               --------->YAB1          <---------ARR14(2)              --------->ANAC46<---------YAB1           --------->ARR14(2)        --------->At4g35610 --------->YAB1             <---------ARR11(3)          <----------DOF2  <        <---------At4g35610<---------YAB1     ---------->DOF2              <----------DOF2          -    --------->ALFIN1     <----------DOF2     ---------->DOF2 ---------->DOF2    <-----------GT1 -----    <---------REM1(1)<---------CCA1(2)---------->DOF2----------->ARR10 <---------CCA1(2) ----------->HVH21   tttcaagtgtagctccaaggcccataactttgataatagtaaaagcccaaaggcccagatatgaaaagctcgcttatctttttttctttctatgacacgg  16724100                                                                         <---------ANAC46                                                                      ----------->HVH21                                                                      ----------->TGA1                                                                    <---------O2                                                                  <---------ZAT14                                                                  --------->ZAT14                                                                 ----------->HVH21                                                               ------>ZmHOX2a(1)        *TSS------->TEIL                                  <---------At4g35610 ---------YAB1<---------ANAC58                            <---------GLK1(1)              ---------->DOF2 -------->ICU4<---------ANAC58                            --------->GLK1(1)    --------->CCA1(2)  --- ---->At5g28300                        <---------------AtSPL8----------->RAV1(2)      >>>>>>>>>TBF1   tgatgatgcgaatgaatcgtgtgagaagagagactgaagaagagctacaaaaaatgagagagctcctgtgaagtgacgaagagacgaagaagaaagagaa  16724200                --------->LBD16          <---------ATERF1(1)         --------->ARR14(2)         <---------ARR14(2)        <---------At4g35610        --------->ATERF1(1)        <------NtERF2       <---------RAP2.3(1)       <<<<<<<<<AtERF-3       <<<<<<<<<AtERF-5       <<<<<<<<<AtERF-1       <---------ERF1       <<<<<<<<<AtERF-4       <<<<<<<<<AtERF-2       <---------MYB46(3)       <---------ATERF1(1)       ------>NtERF2                                  <---------At4g35610      <---------RAP2.3(3)                             --------->ZAT2         ------->GAMYB      <---------DEAR3(1)                              <---------ZAT2       -------->P      <---------ANAC46 <----------DOF2            -------->P<---------TOE2(2)--------->TOE2(3)      <---------RAP2.3(2)     --------------->AtSPL8  --------->At4g35610  ------>MYB46(1)      <---------RAP2.6(2)  ---------->ID1        <-----------GT1           ------>MYB83     --------->RAP2.6(3) <-----------RAV1(1)  <---------ICU4<---------TOE1(2)--------->TOE1(3)   ---- ------>TOE2(3)<---------ANAC46         <-----------GT1    <-----------RAV1(2)                <------   cattaatggcggctactccgtggtactttgtcgcagtacttctcaccattcttaccagctctcaggttccaatttccaaccctaattctccaattccttt  16724300                                                                                             <-------                                                                                             --------                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                     <---------WOX13(1)  ------>ZmHOX2a(1)                                --------->AGP1                  --------->ICU4     --------->ARR14(2)                                   <---------AGP1                  <---------YAB1 <-------TEIL                                             <---------ARR11(3)                -------->HAHB4  --------->GLK1(2)                                  <----------DOF2                --------->YAB1  --------->ARR14(1)                     <---------GLK1(2)  --------->ARR11(3)                <---------ICU4 <---------GLK1(2)            --------->LBD16        <---------DAG2 ------->TEIL  <---------ATHB51--------->ARR14(2)           ------>ZmHOX2a(1)   ------>NtERF2-------- ----------->AtSPL8--------->ATHB12  <---------ARR14(2)   ----------->RAV1(2)  --------->DEAR3(1) ----DOF2      --------->ICU4  <---------ARR14(2)         <---------LBD16    <---------RAP2.3(1)   ctgtacttctcttgctaattatgattgaatcgagattcgtttcctctatgtttcgacatttcctgaactcttagaatttcggcgactttatagatctaga  16724400                                      --------->HSFB2a(2)                                   <---------AGP1                       --------->ETT(2)                            <---------ICU4                    <-----------RAV1(1)               <-------GAMYB--------->ATHB12              <---------ZAT6 <---------ARR14(2)      <---------MYB46(3)          <---------MYB52(1) --------->GLK1(2)       <---------DEAR3(2)       <---------TOE2(3) ----------------->AGL3     <---------ANAC46       <---------YAB1  <---------ETT(2)   <------ZmHOX2a(2)       --------->ICU4  --------->ANAC46      <---------DOF5.7(2)<------NtERF2<---------HSFB2a(2)         <---------YAB1  --------->ANAC58 --HSFB2a(2)<------MYB83------>NtERF2<---------LBD16<---------DREB2C(2)           --------->ANAC58 ->HSFB2a(2)<------MYB46(1)  --------->ARR14(2)  <-----------RAV1(1) <---------WOX13(1) ->HSFC1(1)<---------AtMYB61 <---------ARR11(1) ------->TEIL ----------->GT1     <---------LBD16    <   aattgagttatcgttggtgttattgtcgccaaatctagttctggatcatgtatgtcggttagagtgtgataattgctattttccacggcttcgaacaatg  16724500                      --------->KAN4(2)                     <---------KAN4(1)                     <---------ICU4                           --------->ATHB12                     --------->KAN4(1)           <---------ANAC46                <-------TEIL                     <---------ANAC58               --------->ARR14(1)        <---------MYB52(1) <---------WOX13(1)              --------->ARR11(1)        <-------GAMYB  <---------ANAC58              --------->ARR14(2)       ----------->GT1 <---------ANAC58                 <---------At4g35610            ----------->ARR10        --------->At4g35610  --------->ATHB12              --------->At4g35610        ------>ZmHOX2a(2)   <---------At4g35610  <---------ANAC58                <---------AHL20(2) ---------YAB1<---------ARR14(2)     <---------At4g35610<----------DOF2 <-----------GT1------->TEIL<-   tcatgttagatcggtagattcgattattccagttgattctgctgttaatttgcgagtgcttgattgatttgatttttcgatattatatgtagctgaagaa  16724600  Previous    Next  AGI:  At5g41760.1    Description:  nucleotide-sugar transporter family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G43240.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39723.1); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271); contains InterPro domain UDP-galactose transporter; (InterPro:IPR004689) Range:  from: 16724108    to: 16726712    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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