AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<---------TOE1(3) ----------->GT1 <---------TOE2(3) <---------TOE1(3) <-----------GT1 ---------->DOF2 <---------TOE2(3) <---------MYB46(3) <-- <---------GLK1(1) ---------->DOF2 <------------------------ANAC81 --------->GLK1(1) --------->MYB52(2) <-----------RAV1(1) <-----
gaaatttgaagatggaattctaaagcttgaaggttatttgttaaagtttatttactagtgagtgatgagaaacattgtgttgttgttcatttcatttttt	16694700
<---------ICU4 <---------ANAC58 <-----------GT1 --------->KAN4(1) --------->YAB1 <---------KAN4(1) <---------AHL20(2) <---------ICU4 <---------KAN4(2) <---------AHL20(1) --------->YAB1 ---------->TaMYB80 --------->AHL20(2) <---------YAB1 <------ZmHOX2a(1) --------->AHL20(2) <---------ANAC58 <---- >>>>>>>GRF7 <---------WOX13(1) <---------ARR11(3) <---------ANAC46 ------- <-----------HVH21 <---------ANAC58 <---------AHL20(1) <---------ANAC58 --------->DEAR3(1) --------DOF2 --------->ATHB12 --------->AHL20(1) ------->TEIL <---------ANAC46 <------ ------GT1 <-------TEIL <----------DOF2 <-----------GT1 <---------At4g35610 <---------ALFIN1
ctttgtcaggaatattcattgacttgttttctttcccaatattttattttaccacaaatatgtagcttataatcactatctcgtagacacaccgtcgtta	16694800
<------NtERF2 --------->RAP2.3(1) --------->At4g35610 <---------LBD16 <---------At4g35610 --------->ATERF1(1) <------NtERF2 <---------RAP2.3(1) <---------ORA47(2) <---------ERF1 <---------ATERF1(1) <---------DEAR4(2) ------>NtERF2 <---------RAP2.6(1) <---------RRTF1(1) <---------RRTF1(2) --------->ATERF1(2) <---------RAP2.3(2) <---------ATERF1(2) <---------RRTF1(3) <---------DEAR3(1) --------->DEAR3(1) <---------RAP2.3(3) <------NtERF2 <---------ABI4(1) --------->RAP2.3(1) --------->ATERF1(1) <---------ATERF1(1) --------->LBD16 <---------DEAR4(2) <---------ORA47(2) <---------RAP2.3(1) ------>NtERF2 --------->ATERF1(2) <---------RAP2.3(2) <---------ATERF1(2) <---------RAP2.3(3) --------->DEAR3(1) <---------DREB2C(2) <---------------AtSPL8 <-----------RAV1(1) <-----------HVH21 <---------ANAC46 ---------->DOF2 ------>MYB46(1) <------NtERF2 --------->ZAT2 ----------->GT1 --------->HSFB2a(2) --------->MYB52(1)<---------------------WRI1 --------->DAG2 <---------HSFB2a(2) ------>MYB83 ------>NtERF2 <---------ATERF1(1) -----DOF5.7(2) <---------MYB46(2)--------->DEAR3(1)<---------DEAR3(1) -->DOF5.7(2) <---------MYB59 --------->DEAR3(2)--------->ATERF1(1) ---MYB52(1) <-----------GT1 <----------DOF2 --------->DEAR3(1) ---------->DOF2
actacgagaaaaaaaagaacagaccattttaccaaactgttgtcttttgccgacgaagtcaccgaagccggcggcggaagaaaaggtaaaattacaaaaa	16694900
---------->DOF2 --------->HSFB2a(2) --------------->AtSPL8 --------->TOE2(3) <---------AtLEC2 <---------HSFB2a(2)<---------At5g28300 <-----------GT1 ---------->ID1 -------- --------->At4g35610 <-----------GT1 <----------DOF2 <-----------RAV1(1)-------
ctctcttctgcaaagtgaccatttttcacagtgctaagtacaaatttgtagtctttaacctcactcacagttcatatatgtcgcattttgcatcaacaac	16695000
<---------MYB52(1) <-------GAMYB <---------ANAC58 <---------ANAC58 --------->GLK1(2) <---------TOE1(3) --------->HSFB2a(1) <---------TOE2(3) <---------ZAT6 <---------HSFB2a(1) ------>MYB83 <---------ANAC46 ---------->DOF2 ------>MYB46(1) <---------TOE2(3) --------->ANAC58 --------->TOE2(3) <---------TOE1(3) --------->CCA1(2) < <---------MYB59 <-----------GT1 <---------ANAC46 --------->ANAC46 -- ->MYB46(3) <---------ICU4 --------------->AGL15 *TSS --------->ANAC58 <---------MYB46(3) ---->RAV1(1)<----------DOF2 <---------------AGL15 <---------AtLEC2 <---------GLK1(2) <---------AtMYB61
aaaaaaaaacctaatctttagggtttatttctatttgaaggttttgtggtgttcatggatacaagaaagattccgttgttctgctattggaatggttgta	16695100
<----- ------>ZmHOX2a(2) --------->At4g35610 --------->ARR11(3) <---------ARR14(2) ------>ZmHOX2a(1) <---------ARR11(3) --------->ICU4 --------->WRKY18(1) <---------MYB46(3) ---------TOE2(3) <-----------HVH21 <-----------RAV1(1) -------->DOF2 <---------MYB52(1) <------ZmHOX2a(2) --------->HSFB2a(1)--------->ARR14(2)
ttaaagatggtcctgatggtccgttctatgaagggtcaagtccaagagggatcagagttgatagcaaaatcgaactatccaatttgttggatgatctgca	16695200
<------MYB83 <------MYB46(1) --------->MYB111(2) --------->MYB46(2) --------------->AtSPL8 --------------->AtSPL3 <---------MYB46(3) --------->MYB59 --------->MYB111(1) <--------P <---------MYB55(1) <------MYB46(1) <----- <------MYB83 ------- <---------WOX13(1) <------ ---------->DOF2 --------->ATHB12 <---------ANAC58 --------->DAG2 <---------YAB1 --------->WRKY18(1) --------->DAG2 --------->ATHB12 ----------->RAV1(1) <---------ANAC58 ----AtLEC2 ---------->DOF2 <---------WOX13(1) --------->MYB46(3) <-------TEIL
tcgacttactggttttgaaaagggaaagtttcagattgatttgattggtaggtacccttccattgttcaacaacagatggtcaagtatgtgcgtttgccc	16695300
<---------SPL7 <---------TOE2(3) --------->WOX13(1) <---- <---------ANAC58 ------>MYB83 ----- ----------AGL15 <---------ANAC58 ------>MYB46(1) <------ZmHOX2a(2) ---------->AGL1 <---------YAB1 <-----------GT1 <---------AtMYB61 <---------MYB52(1) -----------AGL1 <---------At4g35610 --------->AtLEC2 ------->GAMYB <---------ARR11(3)
attgtggacgattgtagtttggagatgatgcttgaggtaccatgctaccatccatctatcaacagtctggaggtgtatttagagatcaaaccgttttctg	16695400
--------->ANAC58 <<<<<<<<<<<<<<<<<LFY --------->ANAC58 <---------ARR11(3) --------->ZAT18 --------- <---------At5g28300 >>>>>>>>>>>>>>>>>LFY --------->LBD16 <-------- <-----------GT1 <---------ICU4 --------->ANAC58 <---------DOF5.7(2) <-----------HVH21 -----At4g35610 --------->ARR11(3) --------->ANAC58 --------->DOF5.7(2) <---------ZAT6 ---->At4g35610 <---------CCA1(2) ---------->DOF2 ---------->DOF2 <------ZmHOX2a(1)--------->AtLEC2
atgaagttactgtttctatatctcatcagtccccattggaaagtaatgtgccccgaaagcgttatcggcaagaggatgctagtagtgtcaatgcagatgt	16695500
<------MYB83 <---------MYB46(3) --------->YAB1 --------->ICU4 --------->TOE2(3) --------->LBD16 --------->ATHB12 --------->HSFB2a(2) <------MYB46(1) --------->ARR14(2) <---------HSFB2a(2)<--------P <---------ANAC46 <---------LBD16 <---------ICU4 --------->ETT(1) ------>ZmHOX2a(1) <---------YAB1 <---------ZAT14 -- --------->ALFIN1 <------ZmHOX2a(1) --------->YAB1 <---------SPL7 <- >At4g35610 --------->TOE1(2) --------->TOE1(3) <---------------AtSPL3 ------- -At4g35610 <---------------AGL15 <------ZmHOX2a(1) <------ZmHOX2a(1)<---------ARR14(2)
aaatgtgagtgggagaaatactaaactaggaagtcctccggaggataaccataatggttggattgaagatgaggagagtacggatgtcggaaactctggt	16695600

AGI:	At5g41700.1
Description:	UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2-17 kDa 8 (UBC8) [Arabidopsis Thaliana] (GB:P35131;GB:Q42308;GB:Q43276;GB:Q8LE19); similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.1); similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.2); similar to unknown [Populus trichocarpa] (GB:ABK94185.1); similar to ubiquitin conjugating enzyme E2 [Adiantum capillus-veneris] (GB:ABQ65169.1); similar to unknown [Populus trichocarpa] (GB:ABK93202.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608);
Range:	from: 16693006	to: 16694737	Orientation: Forward
Links:	TAIR MIPS

AGI:	At5g41710.1
Description:	transposable element gene. Mutator-like transposase family, has a 6.2e-18 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays)
Range:	from: 16695055	to: 16697044	Orientation: Forward
Links:	TAIR MIPS

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