Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ATERF1(1)                                    <---------ATERF1(1)                                   --------->ARR14(2)  --------->ANAC58                                 --------->LBD16       --------->ANAC58                               <---------LBD16        --------->DAG2                              --------->MYB52(1)     ---------->DOF2       <----------DOF2                             --------->DEAR3(1) --------------->AGL15    --------->ZAT2                     ------>ZmHOX2a(1)          <---------------AGL15    <---------At4g35610        <             <---------ANAC58<---------ALFIN1  <---------MYB59 ------>ZmHOX2a(1)    <-------TEIL<----             <---------ANAC58--------->AtMYB61 ----------------->AGL3    <---------ZAT2---------->ID1     <------ZmHOX2a(1)      --------->MYB46(3) --------->TOE2(3)         --------->At4g35610    -----   aagagaaggaccattacgagctccttcttcaccaccggagactcccatacctaaataaagcaatcctttcttctcagcttcaacgattcgtcgctctgtg  16684000                                                                                        --------->DREB2C(2)                                                                                        ------->PIF5                                                                                        --------->DEAR3(1)                                                                                    <---------ZAT2                                                                                    --------->At4g35610                                                                                    <---------At4g35610                                                                                    <---------ABI4(2)                                                                             --------->MYB52(1)                                                                            <---------WRKY12                                                                            <---------WRKY45                                                                            <---------WRKY38(1)                                                                         <------MYB46(1)<-------PIF5                                                                         <------MYB83 --------->MYB52(1)          <---------ICU4                                                --------->MYB59--------->DEAR4(2)         <---------ATHB12                                               <---------AtMYB61   <-------- ---------YAB1                    --------->YAB1            --------->At4g35610     --------->ZAT18-- -----ZAT14                      --------->MYB46(3)         <---------At4g35610 ------->GAMYB      -- ---->ZAT14        --------->DEAR3(1)                       <---------ZAT14--------->WRKY18(1)-------   ttctgataccactcatttccaccgtcgatgatacaatcaccaggctccatgtattcagagagagcagagatggtttggtcaacgggagcaccggctttga  16684100              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <-----------ARR10            <---------ARR14(2)            --------->ARR14(2)            --------->ARR11(3)            <---------AGP1            ------->TEIL                                                                           <-    --------->YAB1                                                                                 <-   <---------YAB1       <---------MYB46(3)                                                     <----- --------->YAB1       <---------MYB52(1)                                                      <------ --DOF2--------->MYB52(1)           --------->ANAC58           ----------->HVH21            --------- ------->ANAC58      <-------GAMYB  --------->ANAC58     <---------WRKY18(1)                --------- ------->ANAC58     <---------MYB46(3)                  --------->WRKY38(1)              <------NtERF2 ---->HVH21 --------->AGP1  ------>ZmHOX2a(2)    <---------ANAC46                --------->MYB52(2)<-   caaggatgataacggatctaggccgttggatcgagagaacgaaatcgcgaggcgagtattgaccagcgactgggagttttccttcgttggaggcacgatc  16684200     <---------ANAC58                                         --------->ICU4     <---------ANAC58                              ------>ZmHOX2a(1)     <---------ANAC46                              <----------DOF2 --------TOE2(3)                               --------->ARR14(2) --------TOE1(2)                               --------->GLK1(2) -ZmHOX2a(2)                                   <---------ARR14(2) ---ARR11(3)                                  <---------GLK1(1) >ANAC58             <---------MYB46(3)       --------->GLK1(1) >ANAC58    <----------DOF2     --------->ETT(2)  --------->TOE2(3)                   ----------->HVH21 --------TOE1(3)    --------->ALFIN1    <---------ARR14(2) <---------DEAR3(1)    ---------->ID1  ----   taaggtttcgtcgactttggaagtggttcgattgtagacggagattgggaatcctttatcggcgatgtttaaggcgaggttttgtcccatgactgcgaga  16684300                                                                                               ------                                                                                             <-------                                                                                          <------MYB46(1)                                                                                         <---------DEAR3(1)                                                                                         --------->MYB111(2)                                                                                         --------->MYB111(1)                                                                                         <---------MYB46(3)                                                                                         --------->MYB55(2)                                                                                         --------->MYB46(2)                                                                                         <---------AtMYB61                                                                                         --------->ALFIN1                                                                                        <---------MYB55(1)                                                                                        <--------P                                                                                       <-------GAMYB                                                                                      <---------MYB46(3)                                                                                      --------->MYB55(2)                                                                                 <---------LBD16   *TSS                                                                               ----------->HVH21  <--                                                                         <---------TOE2(3)<------MYB83                                                                         <---------TOE1(3)<---------MYB46(3)                                           --------->CCA1(2)         <----------DOF2  ------------>AtMYB84 ----->DEAR3(2)   ---------->DOF2  <-----------RAV1(1)             <---------MYB46(3)<---------TOE2(2)   ccggcgagacctatgcgagatagagcgacggactccattgttgcgatatgaagagagagagagagatagtggtttagggttttgacggaggttggtggtg  16684400                         <---------AHL20(2)                       <-----------TBP                     <---------CCA1(1)                     <---------RVE1(1)                    <---------ARR11(3)                    --------->ARR11(3)                  ----------->ARR10                --------->LBD16               <---------ANAC46                                           --------->DAG2               <---------ANAC58          <---------ANAC46               ---------->DOF2          --------->ALFIN1             --------->MYB52(1)             --------->YAB1 <---------ANAC46<------NtERF2        ----------->HVH21              <<<<<<<<<ARR2 ----->HVH21   <---------ANAC58   ---------->DOF2                    <---------ATHB12 --MYB46(3) --------->ALFIN1   --------->At5g28300                 --------->WOX13(1) -------ANAC46<---------LBD16 ----------->GT1                    ------------>CBF       --------->MYB52(1)   atgggggagagagagtggcggagatatttatacggtgaaagtgacggactcgtcgatggagccaagagacaatcaaaaggctgacttaacaaactggtga  16684500                <---------At4g35610               --------->ICU4          <------MYB83          <---------ANAC55(2)          --------->At4g35610          <---------ANAC46                    <---------ANAC58            <----------DOF2          <------MYB46(1)                     <---------ANAC58         <-----------GT1         --------->MYB59               <------NtERF2                   ------->TEIL         --------->MYB52(2)           ------>NtERF2              --------->ICU4         --------->MYB46(2)          --------->DEAR3(1)        --------->YAB1                   <----         --------->MYB111(2)         --------->ANAC46         --------->AHL20(2)               <-----         --------->MYB111(1)         <---------DEAR3(1)       <---------YAB1                   ------        <---------MYB55(1)        --------->ANAC46  <----------DOF2 <---------ANAC55(2)      <-------       <---------MYB52(1)       <-----------GT1 <---------MYB52(1)  --------->ANAC55(2)   <---------YAB1       <<<<<<<<<MYB98     <----------DOF2 <---------MYB52(1)  <---------AHL20(2)<---------MYB52(1)---   agagtttttgttaggtgaagatgacgctctttatttacgacgccgttttcgtttctttagttatataattatgtaactttcggtttggaattttgattaa  16684600                                                                                           <xxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                         <-----------RAV1(1)                                                                                         <xxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                     <---------PCF2                                                                                     <xxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                    ----------->HVH21                                                                                  ------>ZmHOX2a(1)                                                                                  --------->LBD16                                                                                 --------->TOE2(2)                                                                                 --------->TOE1(2)                                                                                 <---------LBD16                                                                                <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                =====================RAV                                                                                ----------->RAV1(2)                                                                                <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                        <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                      <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                      <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                     <-----------RAV1(2)<xxxxxxxxxxxx                                                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                     ================================RAV                                                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)    <                                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxx -----At5g28300                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxx ------GT1                                                        <xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxx --->MYB52(1)                ----------->GT1      ----------->GT1 <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxx --WOX13(1)        ---------->DOF2        --------->At5g28300    <xxxxxxxxxxxxxxxxsmallRNA(s) <------ ---->GAMYB      --------->MYB46(3)      ----------->GT1        <xxxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxx   ccgagtcgaattggtccgaaccaaagtaaaccagtttaaaatacggtaaaattagaaaaaacatagcagagccaggtttcgatcctgggacctgtgggtt  16684700         --------->ANAC58         <xxxxxxxxxxxxxxxxsmallRNA(s)         --------->ANAC46         --------->ANAC58       <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------ALFIN1       <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)       <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxsmallRNA(s)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->MYB46(3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------ALFIN1   --------->MYB46(3)   <xxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->TCP16(2)  --------->TCP23 <---------ATERF1(1)  --------->TCP15(2) ------>NtERF2 <---------PCF5  <---------DEAR3(1) <---------TCP16(1) --------->ANAC58 --------->PCF5  <xxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxsmallRNA(s) <---------PCF2 <---------At4g35610 <---------TCP20--------->At4g35610 <---------TCP11(2) --------->ANAC46 <---------TCP15(1)------>NtERF2 --------->PCF2 ----------->RAV1(2) xxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxsmallRNA(si3) xxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxsmallRNA(fl3) <---------ALFIN1 xsmallRNA(s)  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxsmallRNA(se3)<---------ALFIN1 -----------TCP11(1)--------->ANAC58 xxxxxxxxxxxxxxxxxsmallRNA(i2)                                 --------->AHL20(2) xxxxxxxxxxxxsmallRNA(si3)                            --------->YAB1         --------->DAG2 xxxxxxxxxxxxxxxxsmallRNA(se3)            <---------DAG2       <---------AHL20(2)        ---------->DOF2 xxxxxxxxxxxxxxxxsmallRNA(i2)  <----------DOF2      <-----------TBP <-------TEIL     ----------->GT1 -GAMYB<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <-----------GT1  ----------->TBP----------->GT1 xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) *TSS   <----------DOF2--------->AHL20(2)---------->DOF2         <-   atgggcccaccacgcttccgctgcgccactctgctttgttgatacttttttcttatttataaaatataaatacatacaaaagggaaaatgtaaaagaaaa  16684800                                   --------->ARR11(3)                                   --------->GLK1(2)                          <---------ANAC58                <---------ICU4     <---------ARR11(3)               <---------YAB1 ----------->GT1             --------->YAB1  ----------->GT1             <---------ICU4 --------->ALFIN1                                                       <-            --------->ICU4<---------ANAC46                              --------->LBD16            --       ----------->GT1    <---------ANAC58                             <---------RAP2.6(2)        ---      --------->MYB59    <---------MYB46(3)                            <---------ANAC46          <--- ----------------AG     <---------ANAC46       >>>>>>>>>TBF1          <---------LBD16            <---   aatccattttggtaataatcagtgttttgggtgggaaaatctaatagaagaagaaaacgaccacgatgtgtttgcggctaaaaccatgcttattcactta  16684900  Previous    Next  AGI:  At5g41670.1    Description:  6-phosphogluconate dehydrogenase family protein. similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT3G02360.2); similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G64190.1); similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT3G02360.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ64210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63456.1); similar to plastidic 6-phosphogluconate dehydrogenase [Spinacia oleracea] (GB:AAK49897.1); contains InterPro domain 6-phosphogluconate dehydrogen Range:  from: 16682511    to: 16684399    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g41675.1    Description:  pre-tRNA. tRNA-Met (anticodon: CAT) Range:  from: 16684664    to: 16684735    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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