Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------MYB46(3)                                     <---------ANAC58                                     <---------ANAC58                                  <-----------RAV1(1)                     <---------ZAT14 <---------ANAC46                 --------->DAG2  <XXXXXXXXXXXXXXXXXXXXMIR171A                 <---------------AtSPL8<---------AtMYB61                ---------->DOF2--------->CCA1(2)         --------->ATHB12     <---------ARR11(3)         <---------ICU4       <---------ARR14(2)                ------>ZmHOX2a(2)        <---------YAB1        --------->ARR14(2)          --------->ANAC55(2)        <---------ATHB12      --------->ARR11(3)    ---------->DOF2           <---------ANAC58        --------->ICU4 ----------->GT1 --------->ALFIN1   <---------ANAC55(2) <---------ANAC58  <----       <---------TOE2(3)    ----------->ARR10     --------->LBD16----------->GT1          ------->TEIL   atagatgttaatgatttgaaaagtacggtgaagatactggtgtggttccatccgaaaatcacttgatcggttaaaaactagcgttttatatgaaacttgg  16673800                                                                                       ----------->GT1                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                             <---------AtLEC2                                                      <-----------GT1  <------ZmHOX2a(2)             --------->GLK1(2)                        --------->ANAC46--------->ARR11(3)             <---------ARR11(3)            --------->ARR14(2)         <---------ARR11(3) ---GAMYB    --------->ARR11(3)            <---------ARR14(2)     ---------->DOF2 <---------ANAC58   ttgaatgtaaacaaaaatctatatgaaaacagaagttagaaaacatattcgagtttacaccatgtcgaaaaagatcaatgcatggcgtatagtatatcag  16673900                   --------->DAG2                  ---------->DOF2               <---------ZAT6             ----------->GT1           ------>ZmHOX2a(2)          <------ZmHOX2a(2)                     --------->ANAC58         <---------AGP1                         --------->ANAC58                             ------>ZmHOX2a(1)         --------->GLK1(2)                    --------->MYB52(1)                         ------>ZmHOX2a(2)         <---------ARR11(3)           --------->GLK1(2)                                 --------->GLK1(1)         <---------ARR14(2)          <---------GLK1(2)                                  <---------GLK1(1)         --------->ARR14(2)          --------->ARR11(3)  --------->WRKY18(1)           --------->ARR11(3)         --------->ARR11(3)          <---------ARR11(3)<----------ID1                  <---------ARR11(3)         <-----------ARR10       <---------ANAC58     --------->DAG2            --------->ANAC58    -        <------ZmHOX2a(1)        <---------ANAC58   ---------->DOF2             --------->ANAC58  ---   gttttaagcaggatctagtgaaaagcgaagtaattgcgagattttgaaaaacggaaaaggtcaagagtgtctatgttctaccaagaaatgatctcctcaa  16674000                                                                     --------->ANAC58                                                                     --------->ANAC58              --        ---------->DOF2                                            <---------ALFIN1               <--    <----------ID1              --------->ANAC55(2)             <---------ETT(2)             -------- --------->DOF2                 <---------ANAC55(2)             --------->ETT(2)          <----------DOF2 -------->HVH21     <---------ANAC46         <-----------GT1   <------NtERF2    <-----------GT1   ---   gtgaaagggataaagagtttttatgtgtagtatcatgtaatccaaatataccagttcaaacagtcgtcgacactctagagattaactatattcttttcaa  16674100                                                                                 <------------CBF                                                                                <---------AHL20(2)                                                                                --------->ATHB12                                                                               <---------AHL20(2)       ------>ZmHOX2a(1)                                                    <---------ICU4       <---------YAB1                                                       --------->AHL20(2)      --------->TOE2(3)                                                     --------->ATHB51     <---------ICU4                                                         <---------AHL20(2) ------->YAB1<---------YAB1                                             --------->AHL20(2) -------AHL20(2)     --------->AHL20(2)   <---------DEAR3(1)         <----------DOF2 ---->CBF <---------YAB1      --------->MYB52(1)           <-----------GT1 --------->ICU4<----------DOF2 ------>AHL20(2)--------->HSFB2a(2)  <------ZmHOX2a(1) <----------DOF2  <---------AHL20(2)      -----   tttataatccttattcttatggaataaataactaagagaggagggctgtgaagttttcttttaacttcatgcttttaattatttattgatgctttaatgt  16674200                                                             ----------->GT1                                                           <------NtERF2                                                         <---------ANAC46                                                         <---------DEAR3(1)                                                        <------NtERF2                                                        --------->ATERF1(1)                                                        <---------LBD16                                                       <---------RAP2.3(1)                                                       <---------ERF1                                                       <---------ORA47(2)                                                       <---------ATERF1(1)                                                       ------>NtERF2                                                       --------->LBD16                                                      --------->RAP2.3(2)           <---------bZIP60(2)                                                      <---------ATERF1(2)          --------->SPL7                                                      --------->DEAR3(1)        <---------DEAR3(2)                                                      --------->ATERF1(2)       <---------HSFB2a(2)                                                      <---------RAP2.3(2)       --------->HSFB2a(2)                                                      <---------DEAR3(1)      --------->ATERF1(1)                                                      --------->RAP2.3(3)     xxxxxxxxxxxxxxxxxxxxxxx                                                     --------->RAP2.3(1)      <------NtERF2                                                     --------->RRTF1(1)       <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     --------->DEAR4(2)       --------->ALFIN1                                                     <---------LBD16         <---------SPL7                                                     --------->ORA47(2)      ------>NtERF2                                                     --------->DEAR3(2)      <-----------HVH21                                                     --------->ERF1         <---------DEAR3(1)                                                     --------->RAP2.6(1)    --------->DEAR3(1)                                                     <------NtERF2          <---------ANAC46                                                     --------->ATERF1(1)   --------->ATERF1(1)                                                    <---------RAP2.6(1)    --------->RAP2.3(1)                                                    ------>NtERF2          <------NtERF2                                                    <---------RRTF1(1)    <---------ATERF1(1)                                                    <---------ERF1        <---------RAP2.3(1)        <---------HSFB2a(2)                         <---------RAP2.3(1)   --------->LBD16        --------->HSFB2a(2)                         <---------ATERF1(1)   ------>NtERF2        ------>ZmHOX2a(1)           ------>NtERF2  <---------DEAR3(1)    --------->DEAR3(1)     ------>ZmHOX2a(1)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->ATERF1(2) --------->ARR14(2)                <---------ETT(1)<---------RAP2.3(2)   <---------ATERF1(2) --------->ARR11(3)                --------->LBD16 <---------RAP2.3(3)   <---------DEAR3(1) <---------ARR11(3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->ATERF1(1) <---------ARR14(2)   --------->HSFB2a(2)       <-----------RAV1(1)     <---------LBD16     <xxxxxxxx ------->CBF          <---------HSFB2a(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<------NtERF2  -----   caatatcctcctagacacagttatcgagaagtctctcccgaccatgttttctggcgccggcggaggtaaaaatcgccggcgtcgggacgttgctactctg  16674300                                                                                        xxxxxxxxxxxxx                                                                                      <---------ARR11(3)                                                                                      <---------ARR14(2)                                                                                      <---------ARR11(1)                                                                                      --------->ARR11(3)                                                                                      --------->ARR14(2)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             --------->YAB1        <xxxxxxxxxxxxxxxxx                                                          --------->WOX13(1)      <xxxxxxxxxxxxxxxxxx       ------>ZmHOX2a(1)                            ------>ZmHOX2a(1)         <---------ANAC58------- >smallRNA(se3)                                  ---------->ID1       <-----------GT1<---------CCA1(2) xxxxxxxxxxxsmallRNA(se3)  <----------DOF2      <-----------GT1      <-----------GT1 <xxxxxxxxxxxxxxx ->NtERF2           <-----------GT1         <----------DOF2 <---------ATHB12  <---------ANAC58-------   ccatgtttcctctattctcttgttacactctttttgttttcaattccttttttcctcttgcaatcatattttaaacccttgcgaaccatatctctcacga  16674400                                   <---------ATHB12                                 --------->MYB52(1)                             --------->ANAC58                             --------->ANAC58                                                   -----                          ------->GAMYB                                                         -----     ------->GAMYB       --------->ANAC58                                                       -----  --------->MYB52(1)     --------->ANAC58                                                       ----- xxx>smallRNA(i)       ----------->RAV1(1)                                                     ------ xxxxxxsmallRNA(s2)    --------->MYB52(1)                                                    <------- xxxxsmallRNA(fl3)  --------->ANAC58                                                         -------- -->ANAC58          --------->ANAC58                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -->ANAC58          --------->ANAC46        <-------TEIL     <-----------HVH21          <xxxxxxxxxxxx   cttccaacggcgaatcaaactccagcaacggaagccaacgatggggttcagcgtttgctatcccgtctcaccctctgttcgcacaatttctgccaaaacc  16674500                                                                       ===================HOX2a_HOX2a                                                                       ------>ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                     <---------AGP1                                                                     <---------ARR14(2)                              --------->GLK1(2)                  ------>ZmHOX2a(2)                              --------->ARR14(2)                <------ZmHOX2a(2)                              <---------ARR14(2)               <---------ARR14(2)                        ----------->RAV1(1)                    --------->ARR14(2)                       --------->ANAC58                      --------->LBD16 ---->RAP2.6(2)        --------->ANAC46                     --------->HSFB2a(2)                     < ---->DEAR3(1)         --------->ANAC58                     <---------HSFB2a(2)       --------->HSFB2a(2) ---->ANAC46         --------->MYB52(1)                    <-----------------AGL1------>ZmHOX2a(2)<-- -->GAMYB       --------->ANAC58                  <---------DAG2==========================HOX2a_HOX2a --->MYB46(3)   --------->ANAC46  ------>ZmHOX2a(1)       xxxxxxxxxxxxxxxx>smallRNA(s)<---------HSFB2a(2) --ARR14(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <-----------GT1--------->ARR14(2)--------->LBD16 ->ARR14(2) --------->AtLEC2 <---------GLK1(2)    <----------DOF2=========================HOX2a_HOX2a xxxxsmallRNA(i)--------->ANAC58  =====================================HOX2a_HOX2a ------>ZmHOX2a(1)-   gccaatttccagcgatgcaagccaaacgacagaatcctcactcatcgctcaacttttcacttcccgatctggatctattttgatcctcccagaagaaccc  16674600                                                                                    <xxxxxxxxxxxxxxxx                                                                                --------->ANAC58                                                                                ----------->HVH21                                                                               --------->SPL7                                                                             <---------ZAT18                                                                             <---------SPL7                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                          <---------ORA47(2)                                                                          <---------RAP2.3(1)                                                                          <---------RRTF1(1)                                                                          ------>NtERF2                                                                         <---------RRTF1(2)                                                                         <---------RRTF1(3)                           ------>ZmHOX2a(2)                             --------->ANAC46                          <------ZmHOX2a(2)                            <---------DOF5.7(2)                          <---------GLK1(1)                           --------->WRKY12                          --------->GLK1(1)                     ----------->TGA1--------->ANAC58                         --------->ARR14(2)                <---------ANAC46--------->RAP2.3(1)                         --------->ARR11(3)                --------->LBD16<---------ERF1                         <---------ARR14(3)              <---------LBD16 <---------RAP2.3(3)                         <---------ARR11(3)            <---------ARR14(2)<---------ATERF1(2)    <---------ZAT14      <---------ARR14(2)            <-----------HVH21 <---------DEAR3(1)    <---------ZAT18     --------->GLK1(1)              --------->ARR14(2)<---------RAP2.3(2)      <--    --------->ZAT14     <---------GLK1(1)        --------->ANAC58     ----------->HVH21         ----- ---------ALFIN1      <------ZmHOX2a(1)          --------->ANAC46     --------->WRKY38(1)       <---- -------ALFIN1       <---------At4g35610         --------->ANAC58    --------->DOF5.7(2)       <----- -------->ZAT6     <-----------RAV1(2)          <-------TEIL --------->ALFIN1------>NtERF2  <--------   tcacactggacttcgttgatggcaggagatctctctcttggaccattagatgcgccatgtccggtggagacgttgacggcgcacgacgatggtactttct  16674700  Previous    Next  AGI:  At5g41660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44430.1) Range:  from: 16674244    to: 16674876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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