Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ----------->HVH21       <----------DOF2                                                                            --- -----AHL20(2)                                                                                    <-- ---->AHL20(2)                                                                                    --- ----AHL20(2)                                                                                     --- --->AHL20(1)                 <---------ALFIN1                                          <------ZmHOX2a(1) --->AHL20(2)       ---------->DOF2                 <---------AtLEC2            <---------MYB52(2)--- ----AHL20(1)    --------->AHL20(2)      <----------DOF2                      ---------->DOF2     ---   atttagtgtctttgacacattaaaaagaaacaacacctcttcgctttggaacttgaatggatgaggcttattgacaaatacaaagaacgaggaaaatgcc  16663200                                                                                      ----------->GT1                                                                                     ------->MYC2                                                                                     <-------MYC2                                                                                     ------->PIF5                                                                                     <-------MYC4                                                                                     <-------PIF5                                                                                     ------->MYC3                                                                                     ------->MYC4                                                                                     <-------MYC3                                                                                    --------->O2                                                                                    --------->TGA1a                                                                                    --------->ANAC55(2)                                                                                    <---------O2                                                     <---------KAN4(1)              <---------TGA1a                                       <---------ANAC55(2)                          ================= ------>ANAC58            --------->DAG2        --------->ETT(1)              --------->GLK1(1) -------ALFIN1--------->ANAC58         --------->ANAC55(2)                    <---------GLK1(1) ------>ANAC58--------->ANAC58        <---------At5g28300                    --------->ARR14(2) ------>REM1(1)          ---------->DOF2     <-----------RAV1(1)             <---------GLK1(2) ------>ANAC46--------->ANAC46       --------->MYB52(1) <-----------GT1      <---------ARR14(2)   --- ------>bZIP60(2)---------->DOF2     <-----------GT1 --------->KAN4(1)     <---------TOE1(2) --------   acaccacaatacaaacacacaaagccaaaaagtaccaagttacggtactgtcggaatattacagcatcccaaaatcccagatttccacgtgttaaaacaa  16663300                                        <---------ZAT6                                        <---------YAB1                                      --------->YAB1                                  <---------AHL20(2)                                  --------->AHL20(2)                                 <---------YAB1          <---------YAB1         --------->ICU4          ------------>CBF     <---------ICU4                      <------------CBF            ------        <-----------GT1     <---------TGA2(1)                     --------->ATHB12         --------->ARR11(3)   <----------DOF2          --------->bZIP60(1)    ----------->HVH21                       <---------ARR11(3)   <---------DAG2           <---------bZIP60(1)  <---------O2 --------->MYB52(1)          --------->RVE1(1) =============bZIP_DOF <---------At4g35610       <---------bZIP60(1)                ----------->GT1 ------>YAB1--------->WOX13(1)--------->ICU4     <---------bZIP60(2)               >>>>>>>>>TBF1    < ---->CBF<-----------GT1 ----------->HVH21       --------->bZIP60(1)        <------------CBF   <-----   tagtacttttttatcaatctcatgctggtgacataattaatagtgatagtgatgtgactcaaacaaactgattgtagccattgaagaagaaaaaatcctt  16663400                                                                                          <---------TOE1(3)                                                                                          <---------YAB1                                                                                          <---------TOE2(3)                             --------->DAG2         ----------->GT1                  ----------->GT1                     ----------->RAV1(1)            <---------At4g35610   --------->ARR11(3)  ----------->GT1    <---------ALFIN1               --------->At4g35610   <---------ARR11(3) -------- --------->ANAC46 --------->ANAC58        <-------TEIL                    --------->GLK1(2)  <------- >ZmHOX2a(1)      --------->ANAC58   --------->MYB52(1)                   <---------ARR14(2)--------- ---------LBD16 <---------GLK1(1)  --------->MYB46(3)            <-----------GT1   <------------CBF < -----DOF2 ---------->DOF2  ---------->DOF2       <-----------RAV1(2)     --------->ARR14(2)<--------   tagacggaaacaaaaaagaaaccccacatgaaaagtagccaacgttcaaattacaggtgaaacaaattcaccagaaaatctgagaaattgttaagatttc  16663500        ---------->DOF2              <---------DAG2       --------->AHL20(2)            <----------DOF2            --------->DAG2       <---------AHL20(2)           <---------ANAC58           ---------->DOF2   <---------AHL20(2)  ----------->GT1       <---------------AGL15 ->GLK1(1)            --------->ALFIN1      ----------------->AGL2 --GLK1(1)         --------->DAG2   <---------ANAC58        ----------->GT1                         - >ARR11(3)  ----------->GT1    --------->ATHB12           ---------->DOF2                  --------->DAG2 ------------CBF ---------->DOF2<------------CBF  ---------->DOF2                   <----------ID1 -- -ARR11(3)  <----------ID1   <----------DOF2----------------->AGL3       <------ZmHOX2a(1)---------->DOF2   tgtattgaattaaagagaaaaaaggtggaaactttattgctttttggccataaaaagatggaaagtaaagtaagaggagaagaagagagacaaaaagtgg  16663600                                      -------->HAHB4                                      <---------ICU4                                     <---------YAB1                                   <---------ICU4                                  --------->ICU4                                --------->YAB1                                <---------ICU4             <---------ALFIN1                               --------->ICU4             <---------ZAT18                             --------->YAB1               ------>NtERF2                             <---------ICU4              --------->DEAR3(1)                            --------->ICU4              --------->RAP2.3(1)            ----------->GT1 <---------YAB1             ------>NtERF2                             ----           --------->DAG2 --------->YAB1               --------->LBD16                           ----          ---------->DOF2<---------YAB1    --------->ARR11(3)                                    <---    <------MYB83  <---------TOE2(3)--------->YAB1      <---------ATERF1(1)             <---------MYB52(1)    <------MYB46(1)    --------->YAB1--------->ICU4   <---------DEAR3(1)             --------->YAB1   <---------AtMYB61  <-------TEIL<---------YAB1     <---------LBD16        ------>ZmHOX2a(1)  ------ -------->ATHB12  <---------------AtSPL8   <---------ARR11(3)              <---------MYB59 <---------ZAT18 ------->ICU4   ---------->DOF2<---------YAB1------>ZmHOX2a(2)       <-------TEIL   <---------ATHB12-   aaagattggtggaaaagttaaaggttcataataataataataatcgatcttcaactccggcgcacattagcttcgttcctaactcaatcgttgtgtcctc  16663700          --------->At4g35610                                                                       <          <---------At4g35610                                                                       -          <---------ZAT2                                                                          <--          --------->ZAT2                                                                          ---     --------->ZAT18           --------------->AtSPL3                                           <---- ----->HSFB2a(2)           <-------TEIL                                                 <---------At4g35610 ----->HSFC1(1)    <---------HSFB2a(2)                                                  --------->At4g35610 ------HSFB2a(2)   --------->HSFB2a(2)     ---------->DOF2                           <---------At4g35610 >ZmHOX2a(1)      <---------LBD16    --------->ZAT6                               <---------At4g35610 --------->DOF2<----------DOF2 <---------ICU4                                  ------>ZmHOX2a(1)-----   tagaaagctcgctgctgctttctgggagtttcatcagtaccactacaaagacgaagaagattgctcttactcttacctctcctctgcttctgctaaaatg  16663800                                               --------->ANAC58                                               --------->ANAC46                                               --------->ANAC55(1)                                               <---------ANAC55(2)                                               --------->ANAC58                                             --------->MYB52(1)                                           <-----------TGA1                                           <-----------HVH21                                          --------->ANAC46                                          --------->bZIP60(2)                                        <---------DOF5.7(2)                                       <---------WRKY38(1)                                       <---------WRKY12                                     <-----------HVH21                                     ------>NtERF2                                    --------->RAP2.3(3)                                    --------->RRTF1(2)                                    --------->RRTF1(3)                                    --------->ATERF1(2)                                    <---------ATERF1(2)                                    --------->RAP2.3(2)                                    --------->DEAR3(1)                                   <------NtERF2                                   --------->RAP2.3(1)                                   --------->ERF1                                   --------->RRTF1(1)          <-------GAMYB                                  ------>NtERF2--------->ANAC55(2)                                 --------->DEAR3(1)           <---------MYB46(3)    <------NtERF2                --------->ANAC46            <---------RAP2.6(2)    ------>NtERF2                --------->RAP2.6(2)         <---------ANAC46   --------->DEAR3(1)            --------->RAP2.3(2)         <---------ANAC58   <---------ATERF1(1)          --------->DEAR3(2)       <-------GAMYB   ------>NtERF2                --------->ERF1<---------LBD16<---------ANAC58  <---------DEAR3(1)            --------->RAP2.3(1)     <---------MYB46(3) --------->LBD16                --------->MYB46(3)      <---------DEAR3(2) --------->At4g35610            --------->ATERF1(1)     --------->MYB55(2) <---------At4g35610           --------->At4g35610  --------->DAG2   <------ZmHOX2a(1) ---------ALFIN1               <---------ATERF1(1)---------->DOF2  <---------TOE1(3) -------->DEAR3(1)      <---------ZAT2--------->DOF5.7(2)--------->ATERF1(1) -------At5g28300     <------NtERF2--------->ATERF1(1) <---------RAP2.6(2) ---->TEIL           --------->LBD16--------->RAP2.6(2)<---------DEAR3(1)        <---------WRKY18(1)- -----ABI4(2)       --------->DEAR3(1)<------NtERF2---------->DOF2 <---------TOE2(3) <----------DOF2< ---->ZAT18        <---------LBD16<---------ATERF1(1)------------>AtMYB77   --------->ARR11(3)  -----   caccgcggcccaaatggtttcgccggagctagtagccgccgtcaacgtcacggaaaggcggttgcggttaaggagaatggtcttgacctttctcaattcc  16663900                                            <----------DOF2                                           <---------------AGL15             ================================HOX2a_HOX2a             ===============================HOX2a_HOX2a           ----------->RAV1(2)             --------------->AGL15       ------>ZmHOX2a(1)                   <---------DAG2       =====================================HOX2a_HOX2a     ===============HOX2a_HOX2a           <-----------------AGL3     --------->HSFC1(2)                   ----------------->AG     ------>ZmHOX2a(2)                    <-----------------AG     <---------HSFC1(2)                   <-----------------AGL1    ================HOX2a_HOX2a           ----------------->AGL2                        ----------->RAV1(2)    <------ZmHOX2a(2)                   <-----------GT1                                 <---------At4g35610   <---------ARR11(3)                 ------>ZmHOX2a(2)                                 --------->At4g35610   --------->AGP1--------->YAB1      <------ZmHOX2a(2)                                  --------->ZAT2   --------->ARR14(2)               <-----------ARR10                                 <-----------RAV1(2)   <---------ARR14(2)               <---------ARR11(3)                           <---------TOE1(2)   --------->ARR11(3)               --------->ARR14(3)        <------------AtMYB77   <-------TEIL  <---------GLK1(1)                 <---------ARR14(3)       <---------At4g35610------>ZmHOX2a(1) -------->HSFB2a(2)       <----------DOF2 ----------------->AGL1         <---------MYB52(1)     ----- ---------HSFB2a(2)    --------->ARR11(3) <-----------------AGL2      ------>ZmHOX2a(2) <---------ZAT2 ---->TOE1(2)------>ZmHOX2a(1)      --------->ARR11(3)<----------DOF2 =================HOX2a_HOX2a   ttcgagatccttctcctgatcatcaggtctttctctaagatcttaccttttttggacttttgcaactgttgatcggtttgtcctagattcagctgaatca  16664000                                                     <---------ATHB12                                                  --------->ICU4                                           --------->ALFIN1                                          --------->TOE2(2)                                          <-------MYC3                        <---------TOE2(3) --------->TOE1(2)                        <---------TOE1(3) ------->MYC3--------->ATHB12                   ----------->GT1       --------->O2<---------YAB1      <---------YAB1            <---------ANAC46             --------->TGA1a               <---------At4g35610         <---------YAB1============================bZIP_DOF  <---------ZAT6 <---------YAB1       <---------ZAT6  ---------->DOF2   <---------O2--------->ICU4   <---------YAB1 ---->WOX13(1)     <---------ZAT6        <---------TGA1a   <---------At5g28300     <---------ZAT6<---   atcggtttagtattatgggtagtgttaaagtttggattttgaaacgtgggtcgtaatgatttactgtgaattctgatgatttttggtgttatggcccttg  16664100  Previous    Next  AGI:  At5g41620.1    Description:  Identical to Uncharacterized protein At5g41620 [Arabidopsis Thaliana] (GB:Q66GQ2;GB:Q0WN78;GB:Q9FFR8); similar to intracellular protein transport protein USO1-related [Arabidopsis thaliana] (TAIR:AT1G64180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65868.1) Range:  from: 16663558    to: 16666196    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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