Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->YAB1                                <---------GLK1(2)                       <---------TOE2(3)                       --------->AHL20(2)                    <---------ATHB12         <---------------AtSPL8     ----------->ARR10<---------YAB1 ------GLK1(1)--------->GLK1(2)         --------->YAB1         <---------AHL20(2)    <---------GLK1(2) -DOF2  --------->TOE2(3)--------->YAB1<---------ATHB12    --------->AHL20(2)    ---------->DOF2   attcttatattcttagaatccaattaagaatcataatccaaatcaaaatagtactccaagtttatataaattcttagattctcaaaagattattttttaa  16658600                                                      <------ZmHOX2a(2)                                                  <-------TEIL                                                 --------->ARR14(1)                                                 --------->CCA1(2)          --------->AHL20(1)                                                <---------ARR11(3)          --------->ARR11(3)    <---------HSFC1(2)                          <---------ARR14(2)          <---------ARR11(3)    --------->HSFB2a(1)   <-------TEIL          --------->ARR14(2)         --------->AHL20(2)       <    --------->HSFC1(2)<-------TEIL              --------->ARR11(1)     --------->AHL20(2)           -    <---------HSFB2a(1)  --------->AtLEC2     ----------->ARR10      --------->YAB1               <--   cagagaagattccactataacacatacatgcatatagagagttgcaccaagatacgatcccaattacacaagaataaatatatacaaaaaaactacaatt  16658700                                       <-----------GT1                                     --------->YAB1                                     <---------ICU4                                  <---------ICU4                                  --------->YAB1                                  <--------HAHB4                                  --------->ATHB51                                 --------->ICU4         --------->TOE2(3)       <---------YAB1         --------->TOE1(3)     --------->YAB1 ---------HSFB2a(2)            --------->TOE2(3)                          --------->ANAC58          - -------->HSFB2a(2)            --------->TOE1(3)     --------->ANAC58     --------->ANAC46          < -------HSFB2a(2)    ----------->GT1<---------YAB1   --------->ANAC58     --------->ANAC58  ---------   ctcgagaaaaaccttaaattgtctggtcaaaaaccataattataccctagaaatcaaggcattgtgaagagattaaacgaaacaacaagagagtacctga  16658800                                                                               ---------->DOF2                                                                            --------->AtLEC2                                                                        <---------DDF1                                                                        ------>NtERF2                                                                        <---------RAP2.6(3)                                                                       --------->DEAR3(1)                            <------ZmHOX2a(2)                          --------->RAP2.6(2) -------->ARR14(2)         <---------ARR11(3)                          ----------->HVH21 ---------ARR14(2)         --------->ARR11(3)                          --------->ANAC46            <- -->RAV1(2)        ------>ZmHOX2a(2)         --------->AHL20(2)      --------->At4g35610<----------ID1   agaattcgcaagtgattctgatctcactagatcacgaagtcggacattgaaatagttataggcccagaattagccgacatgtaaagaagaacgacgagag  16658900                                                        --------->ZAT18      <---------ANAC46                                  *TSS  <---------HSFB2a(1)                                   <---------ZAT18  --------->ATHB12              >>>>>>>>>TBF1          <---------ANAC58  <---------HSFC1(2)         ------------------------>ANAC81                          <------------CBF <---------YAB1           <------ZmHOX2a(1)   ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(s) -----ZmHOX2a(1) <-----------RAV1(2)<----------ID1     <---------ANAC58           ------>ZmHOX2a(2)   aggatgattcgtagaaattgcaggcgaaggagaagaagaagacaaaaacaaagaatagtgtgcgagagagagagagaagttggatcgatattgactagaa  16659000                                                                                     --------->ANAC55(2)                                           ----------------------->TaNAC69(2) <---------MYB52(1)                          --------------->AtSPL3                             <-------GAMYB          -                          <---------------AtSPL3    <-----------GT1         <-----------RAV1(1)     -                ---------->DOF2    --------->WOX13(1)             <----------DOF2    <---------ANAC55(2)       --------->AHL20(2) --------------->AtSPL8 <---------AHL20(2)<------------------------ANAC81<--   gattacgacttaaatagagaaagatggagcagtacatctatcagtcgtcatttttttcaggtctctctctttttctctctgttggatacttaatgcttag  16659100                                              <---------ANAC46                                         ------>ZmHOX2a(2)                           <---------AHL20(2)                                       <---------ARR11(3)                           <---------AHL20(1)                                       --------->ARR11(3)                           --------->AHL20(2)                                     <---------YAB1                          ----------->GT1    <----------DOF2                <---------ICU4                         --------->MYB52(2)    <---------DAG2                 --------->YAB1                      <---------ANAC58 -------->ANAC58                  <---------ATHB12                     <---------ANAC58         <---- -------->ANAC58                  --------->ICU4                 ------->TEIL<---------MYB46(3) <---- ---------GT1              <----------DOF2<----------DOF2    <---------TOE2(3)      <---------AHL20(2)   tcacgactttataagttttatctcattagctttgtaatcatgatctttttgtgtatttttgttaatgaattttgcttagttgttaatttttttgtagttg  16659200                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                    <                                                                                                    x                                                                                                    x                                                                                                    <                                                                                                   xx                                                                                                   --                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                                   <x                                                                                                   <x                                                                                                   xx                                                                                                  <xx                                                                                           <---------YAB1                                                                                          <xxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                        <---------AHL20(2)                                                                                        <---------AHL20(1)                                                                                        --------->AHL20(2)                                 --------->ANAC46                                    <---------ARR11(3)                              <-------TEIL ---------->DOF2                           <---------AHL20(1)                            --------->ARR14(2)                 <---------WRKY12      --------->AHL20(1)                            <---------ARR14(2)             --------->DAG2            --------->AHL20(2)                           <------ZmHOX2a(1)       --------->GLK1(2)           --------->ANAC58   <xx                  <---------At4g35610   <----------ID1    ---------->DOF2      --------->ANAC46  xxxx   <---------YAB1 --------->At4g35610---------->DOF2  <---------YAB1           --------->ANAC58  <--- --MYB83 --------->YAB1---------->DOF2--------->DAG2<---------At4g35610      <-----------GT1     <--- --MYB46(1) <-----------ARR10--------->CCA1(2)   <------ZmHOX2a(1) <----------DOF2  xxxxxxxxxxxxxxxxx   gtttttttatagcataacttagctgaaaaggatacaccgaaaaggaaaagaggaatctgataaagtcaacttttgtttttcactcaatattttattttag  16659300            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <-------GAMYB               --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ALFIN1            --------------->AGL15 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) xxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             <-- xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                       <xxxxxxxxx ------->ALFIN1    <---------DAG2                                                          xxxxxxxxxx xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         <---------AHL20(2)             xxxxxxxxxx xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               <-----------GT1   <xxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxx xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <----------DOF2   xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <---------DAG2    <xxxxxxxxxxxxxxxxsmallRNA(s)   <-- xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         ----------------- xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  ---------->DOF2       <---------YAB1         <-----------GT1xxx xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------YAB1--------->ZAT14 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxsmallRNA(si3)   <---------------AGL15<---------ZAT14 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxx>smallRNA(le3)  --------->YAB1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------TOE2(3)     --------->YAB1       <----------DOF2   <xxx ------ANAC58      <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <---------DAG2  <xxxxx ------ANAC58   <-----------GT1   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <-----------GT1xxxxxxxxxx xxxxxx>smallRNA(le3)       --------->TOE2(3) <-----------GT1   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ggtgtgttggcaaaatagtcactttttcaaacttaattaagaaagtagtcactttactatttataatttgcaaaatagtcacttttcacagtttgattcg  16659400                                                                                                   <x                                                                                                  xxx                                                                                                  <--                                                                                                 xxxx                                                                                                 xxxx                                                                                                -----                                                                                                xxxxx                                                                                                <xxxx                                                                                                <xxxx                                                                                                xxxxx       <---------------AtSPL3                         --------->AHL20(2)                        <xxxx       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------ANAC46                                  -----       <---------------AtSPL8             <---------ZAT14            <---------ZAT18           <xxxxx       --------------->AtSPL8             --------->ZAT18        <---------------AtSPL8        xxxxxx     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->SPL7      <---------AHL20(2)              <------   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ANAC46xxx   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxsmallRNA(le3)--------->ZAT18          <xxxxxx  xxxxxxxxxxxxxxxx>smallRNA(i)          --------->ZAT14      <---------AHL20(1)  --------------->AtSPL8  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ZAT18      --------->AHL20(1)  --------------->AtSPL3 -------ZAT18                           <---------ZAT18 --------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxsmallRNA(le3)           <---------------AtSPL8<---------AHL20(2)   <---------------AtSPL8 xxxxxxxxxxxx>smallRNA(se3)          <---------ANAC46 <---------AHL20(2)    --------->DAG2   xxxxxxxx xxxxxxxxxxxxx>smallRNA(i2)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   ---------->DOF2   xxxxxxxx xxxxxx>smallRNA(s)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------ZAT14     <---------DAG2    --------->DAG2    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxx ---->WRI1  --------->ANAC46    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ZAT14        xxxxxxxxx xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)---------->DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxx xxxxxxxxxsmallRNA(fl3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ZAT14  xxxxxxxxxxxxxxx xx>smallRNA(fl3) <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ZAT6  <xxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------------->AtSPL8 xxxxxxxxxxxxx xxxxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxx>smallRNA(i)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   tacacttggattgtacatcacttttagtatacaaatgtaaagtgtacgctgtgtatttttatatatatttgtacactaaaagtgatgtacaatctaagtg  16659500  Previous    Next  AGI:  At5g41610.1    Description:  ATCHX18 (cation/hydrogen exchanger 18); monovalent cation:proton antiporter. similar to ATCHX19 (CATION/H+ EXCHANGER 19), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT3G17630.1); similar to ATCHX16 (CATION/H+ EXCHANGER 16), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT1G64170.1); similar to ATCHX17 (CATION/H+ EXCHANGER 17), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT4G23700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65874.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81240.1 Range:  from: 16655598    to: 16658956    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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