Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <-----------GT1                <---------ICU4                             <---------ARR11(3)                       <---------GLK1(2)                             <-----------ARR10                   --------->MYB52(1)                      <<<<<<<ZML2 --------->ANAC46      --------->ANAC58 --------->YAB1         <-----------GT1     --------->ARR11(3)         --------->ANAC58<-------TEIL  <-----------HVH21   tggatgttttataactacaacctagaactaatatctacacaactaatttacaactacaacgctaacaaaacagattcataagtacaactgtgagacagat  16650700                                                                              -------->HAHB4                                                                             --------->ICU4                                                                          <---------AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(2)                                                                    <---------ATHB12                                                              --------->ZAT18<---------YAB1                             --------->AHL20(2)       <------ZmHOX2a(1)  --------->AHL20(1)                             <---------AHL20(2)       ==================================HOX2a_HOX2a                           --------->YAB1           <---------TOE2(3)  ------->TEIL                       --------->TOE2(3)      --------->ICU4<---------------AtSPL8              --------->TOE2(3)      --------->ARR11(3)<---------------------WRI1------>ZmHOX2a(2)    <---------TOE2(3)--------->GLK1(2)   ----------->GT1   <---------ANAC46--------->YAB1   ttagtagaggtttgattcttaataatctaaaataaatgtgatattgtaattttgaaggatgatgtgtacaatgaatataatgatccatattctaaaacat  16650800                                                                    <-----------GT1                                                                  --------->HSFC1(2)                                              <---------TOE2(1)   <---------HSFC1(2)                                           <---------SPL7         --------->HSFB2a(1)                                       --------->TOE2(3)     --------->ALFIN1                                     <---------At5g28300  --------->ALFIN1                       ----                                    <-----------GT1      <------ZmHOX2a(1) <----------DOF2       <---                                <---------AHL20(2)<-------TEIL    <---------HSFB2a(1)      ----------                       --------------->AtSPL8--------->SPL7 <------ZmHOX2a(1)          <------ZmHOX2a(1)   attcaaataagtttattctaaatactttgtacatatatttaccttggtacgatgcatgaggaggagggagtttccatctttatccatgaggatgagttcc  16650900                            ----------->GT1                            --------->LBD16                     --------->ARR14(2)                          <---------LBD16                   --------->LBD16                  <---------YAB1                     --------->WOX13(1)                <---------ICU4                    <---------ARR11(1)       <---------MYB52(2)   <---------ANAC46-------->HAHB4                 ------->TEIL  <---------ARR14(2)                <-- <-----------HVH21--------->ICU4      --------->ARR14(2)    --------->At5g28300                   --- -->ZmHOX2a(1)  <--------HAHB4  --------->WOX13(1)--------->GLK1(2) ------>ZmHOX2a(1)           <---- ------LBD16   --------->ICU4--------->At5g28300 <---------ARR14(1)--------->TOE1(3)         <------- ->ARR10<-------TEIL<-----------GT1  <---------CCA1(2)   <---------At5g28300------->GAMYB  <---------   tcgggtcgggttcgggcataattatcgacccggtaaatcaaatctccattcgaatctatcaccgtgaatccttcacaactcaccagaagcgattttctcc  16651000                                          <---------ANAC46                                       --------->DEAR3(1)                                      <------NtERF2                                      --------->ATERF1(1)                                      <---------At4g35610                                      --------->At4g35610                                     <---------ATERF1(1)                                    <---------DEAR3(1)                                   <------NtERF2                                   <---------At4g35610                                    ------>MYB83                --------->ANAC58   --------->ATERF1(1)                                    ------>MYB46(1)           <---------SPL7         <---------RAP2.3(1)                                   --------->DREB2C(2)          <---------ANAC58  <---------ARR11(3)                                 <---------At5g28300          <---------ANAC58  --------->ARR11(3)                           ------->TEIL   --------->DEAR3(1)          <---------ANAC46  <---------ARR14(2)                         <-------TEIL <---------ETT(2)     <---------ANAC58       --------->ARR14(2)                   --------->MYB52(1) --------->WRKY38(1)     <---------ANAC58       <-----------ARR10                   ----------->TGA1    --------->WRKY12   <---------MYB52(1) ------>ZmHOX2a(1)----------->HVH21        ----------->HVH21   --------->ETT(2)< -------ALFIN1  --------->ANAC58  ------>NtERF2               --------->At4g35610  --------->ALFIN1<- ------>ANAC46  --------->ANAC46 --------->ANAC46             <---------At4g35610 --------->LBD16 <-- -----ALFIN1 <---------REM1(2)  <---------LBD16     <---------ZAT18    --------->ABI4(2)----------->HVH21 ----GT1 --------------->AtSPL3 --------->At4g35610 <---------ZAT14<---------DEAR3(1)   <---------MYB59 --GT1   --------------->AtSPL8<-----------RAV1(1)  --------->ZAT14<---------DREB2C(2) --------->DEAR3(2)   acaccgtgagtgtcgtacacgctcctccaatatctgcggcagcgacggagactgtggactctgtagatgacggtgcatcttcaccgtggaccgacctcga  16651100                                                                                  ------------>CBF                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                        ------>ZmHOX2a(2)                                                                      --------->ARR14(2)          ---------->DOF2                                             <-----------ARR10        --------->ANAC58                                              <---------ARR14(2)        --------->ANAC58                                              <---------ARR11(3)   <---------ANAC58                                                   --------->ARR11(3)   <---------ANAC46                                              <-----------GT1 --------->TOE2(3)<--   <---------ANAC58                                  <---------AHL20(2)<------ZmHOX2a(2)      <------ ---------MYB52(1)                               ==================================================== ------GAMYB                    <---------AtMYB61<---------------AGL15<---------AGP1          <------ -------MYB46(3)          ---------->ID1         --------------->AGL15--------->AGP1     ------------   ccgttgcttcaagaaagggaacatttttgtagttttggtgttcttggttaactattttaagagagttttacagatctaattaatctcaattctcaataca  16651200            <------MYB46(1)               ------>ZmHOX2a(2)            <---------ANAC55(2)          <------ZmHOX2a(2)            <---------ANAC46            <---------ARR11(3)            <------MYB83                --------->ARR11(3)           --------->MYB111(1)          --------->AGP1           --------->MYB59              <---------AGP1           --------->MYB46(2)    --------->AHL20(2)           --------->MYB52(2)    <-----------TBP         <---------MYB52(1)      <---------AHL20(2)      <---------TOE1(3)        <-----------TBP      --------->DAG2           --------->AHL20(2) -------ARR14(2)               <---------AHL20(2)                    --------->CCA1(2) -----------AG               <-----------TBP                        --------->AHL20(1) ===========MADS_MADS      --------->CCA1(2)            --------->ALFIN1    <----------DOF2 <-------- -----------AGL3          --------->ARR11(3)   <---------AHL20(1)   <---------ARR11(3)    <---------YAB1 >CBF <---------TOE2(3)   <---------ARR11(3)   --------->AHL20(1)   --------->ARR11(3) <---------AHL20(2)   aatatggtaaggttaggtatacatatgagatatatatatatagatctaatatatatgtgtgtggatgaaagatattagctttgttatattatatcattgt  16651300              <---------AHL20(2)             <---------AHL20(1)             <---------AHL20(2)             --------->AHL20(2)         <---------YAB1        <---------AHL20(1)        --------->AHL20(2)       --------->YAB1      <---------AHL20(2)      <---------YAB1   <---------AHL20(2)   --------->AHL20(1)   --------->AHL20(2)   <---------AHL20(1)                                                        --------->AtMYB61  --------->AHL20(2)                                          <---------ARR11(3)    --------->YAB1  --------->YAB1       <----------DOF2            --------->RVE1(1)          ----------->RAV1(1) <---------YAB1  <-----------GT1              <---------AHL20(2)   --------->AHL20(2) ----CBF<---------AHL20(2)                    --------->AHL20(2)   <---------AHL20(2)        <-------   cttattatattataatttttttcttctttatatcaacttgcaaagtttttaaatatcgctacttgatatttaaatgcgaccacaaataatacttagtgac  16651400                                                                  --------->YAB1                                                                  <---------ICU4                                                                  -------->HAHB4                                                                 --------->ICU4                                                                 <---------ATHB51                               <---------ICU4                  <---------ICU4                               <---------GLK1(2)              --------->AHL20(2)   --------->ZAT14          --------->YAB1           <---------TOE2(3)   <---------ZAT14       --------->YAB1--------->TOE2(3)      <---------AHL20(2)                  ---   --------->ZAT18     --------->AHL20(2)       <----------DOF2--------->YAB1                     --- --------------->AtSPL8<---------AHL20(2)  ---------->DOF2--------->AHL20(2)                     ---- --ZAT6              ----------->TBP<-----------GT1 <-----------GT1 <---------YAB1   <---------ZAT6   aaaactgtactattctacaaaatataaaaataagaatttcacctaaaaagctttaaacgttttattaattatgagtcaaaatttttagtgttatttgaaa  16651500                      <-----------GT1                   <---------YAB1                 <---------CCA1(1)                 <---------RVE1(1)                <---------AHL20(1)                                                        <----------                <---------ARR11(3)                                               <---------AHL20(2)          --------->YAB1                                                       <---------RVE1(1)         <---------YAB1       <---------HSFB2a(2)             <---------ICU4  <---------GLK1(2) ------>AHL20(1)--------->ARR11(3)              <---------AHL20(2)   --------->ANAC46  <-----------GT1 ------>AHL20(2)--------->AHL20(1)       --------->YAB1     <---------TOE2(3) --------->ARR11(3) ----->YAB1   ----------->ARR10      <---------AHL20(2)<---------TOE2(3)      <---------ARR11(3)   aataatacaatatgataagatattataccattctataagttaattagaattttttttaagttaatgaatacaggtcattagatttttttttatcacatta  16651600  Previous    Next  AGI:  At5g41590.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65896.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 16649314    to: 16651124    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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