Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ------>ZmHOX2a(1) ------HSFC1(2) ------HSFB2a(1)        <---------ICU4 ----->HSFB2a(1)       --------->ICU4 ----->HSFC1(2)        <---------YAB1 --->ARR14(2)        --------->YAB1 ----ARR14(2)       <---------YAB1 ----GLK1(2)       --------->ARR11(3)                                     --------->TOE2(3) >ANAC58           <---------ARR11(3)                   ----------->GT1  --------->YAB1 >ANAC46       <------ZmHOX2a(1)                    <---------ZAT14   <---------CCA1(2) >ANAC58     <---------TOE1(2)  ---------->DOF2     --------->ZAT14 --------->YAB1   actcctcaaccttcttaggaatatcattattcgctatagcaaaatcaatgcctctgaacagagaaattaagcatatcatcaattcaaaaacacagccaaa  16647600                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                         ----------->GT1                                                     --------->ANAC58                                                    --------->ZAT18                                                    <---------ZAT18            <---------ANAC58                       --------->ARR11(3)          <---------ANAC58            <---------ANAC58                       <---------ARR11(3)          <---------ANAC58            <---------ANAC46                    <---------GLK1(2)             --------->ZAT18         --------->MYB52(1)         --------->LBD16<---------YAB1<----------DOF2--------->ANAC58  --------->ANAC46          <--- --------->YAB1 ---------->DOF2  ---------->DOF2  <---------ZAT18      --------->ANAC55(2)      -----   aaatcaaaacccagagattaaagaatatcatttagaaaagctttgatttttgtgcgcgcatgttaatatctataagtaatggcgagagagagagagagag  16647700                                                                                           --------->DEAR3(1)                                                     --------->ZAT2                        --------->At1g77200                                                     <---------At4g35610                  --------->MYB46(3)                                                     --------->At4g35610              <-----------HVH21                                                     <---------ZAT2            <---------TOE2(3)                                                 --------->TOE2(3)            <---------DOF5.7(2)                                                 --------->TOE1(3)          --------->DOF5.7(2)                          --------->ARR14(2)   -------->P                  --------->TOE2(3)                          <---------GLK1(2)    ------->TEIL                --------->TOE1(3)                   <-------TEIL       =============HOX2a_HOX2a            --------->ANAC55(2) -------  --------->AHL20(2) ----------->RAV1(1)  <------ZmHOX2a(1)               <---------ANAC55(2) ------- ---ZmHOX2a(1)  --------->CCA1(2)     ------>ZmHOX2a(1)                   <---------ANAC46--------->DEAR3(2) ------>GT1---------->DOF2<---------ARR14(2)<------ZmHOX2a(2)           <---------DOF5.7(2)----------   gaaattacttagcgaaagagatgcaacagatttgaaactccttaggatcaaccttagctccgtcttgaatgtggtaacgtaaacgttgagtcaccgacgc  16647800                                                                              <---------ETT(2)                                                                          <------NtERF2                                                                        --------->DEAR3(1)                                                                        --------->RAP2.6(2)                                                                        --------->RAP2.3(2)                                                                       --------->ATERF1(1)                                                                      ------>NtERF2                                                                      <---------ATERF1(1)                                                                      <---------At4g35610                                                            --------->SPL7--------->RAP2.3(1)                                       <---------MYB52(1) <---------SPL7<---------ATERF1(2)                                     <---------ANAC55(2)  ----------->HVH21 --------->LBD16                                <---------At4g35610       --------->LBD16------>NtERF2                            ------>NtERF2              ------>NtERF2--------->ATERF1(1)                           <---------ANAC58            --------->MYB52(1)--------->LBD16                           <---------ANAC46           --------->DEAR3(1)--------->ATERF1(2)                           <---------ANAC58        --------->ANAC58--------->At4g35610             <-                         ------>NtERF2--------->LBD16<---------MYB55(2)--------->ERF1              <-                         <---------ATERF1(1)       --------->ANAC58----------->RAV1(2)             <-                       --------->ATERF1(1)     <---------ARR14(2)  <---------At4g35610             <-                      <---------At4g35610--------->ANAC58--------->MYB46(3)<---------ANAC46        <-                      --------->At4g35610--------->ANAC58<---------MYB55(2)--------->DEAR3(1)      --                     <---------bZIP60(2)--------->SPL7<---------ALFIN1--------->At4g35610        ----                  ----------->TGA1   --------->ANAC46--------->MYB46(3)--------->RAP2.3(1)     <----- -->ANAC58        ----------->HVH21  --------->ANAC55(2)<------NtERF2--------->DEAR3(1)        <----- -->ANAC58 --------->WRKY38(1)  --------->At4g35610--------->ANAC46<---------ATERF1(1)<---------TOE2(3) ->HVH21   ----------->HVH21<---------RAP2.6(3)--------->ARR14(2) --------->DEAR3(1)  <---------YAB1-   taatcggaaggaattgaccagtgacgctgccgtcttctcccgtaagccagttccagccaccggacgagccgctgccgccgtagacattgagattggaact  16647900    <---------LBD16    --------->LBD16   <---------ANAC58   <---------ANAC46   <---------ANAC58 --------->MYB52(1) <---------At5g28300 --------MYB46(2) --------MYB55(2) --------MYB52(2) --------MYB111(2)                                                                    <---------At4g35610 --------MYB111(1)    --------->HSFB2a(2)                                   --------->AHL20(2) ------->MYB46(3)     <---------HSFB2a(2)                         >>>>>>>>>TBF1 <-----------GT1 ----->MYB52(1)      <---------LBD16                           >>>>>>>>>TBF1<---------AHL20(2) ----MYB59 --------->YAB1                                   >>>>>>>>>TBF1   <---------AHL20(1) ----MYB52(2) ---------->DOF2      ----------->GT1       >>>>>>>>>TBF1      --------->AHL20(1) -------->MYB55(1) --------->GLK1(2)                  >>>>>>>>>TBF1    ----------->GT1--------->At4g35610   aactaccgtggaatcacaaagtttctggattttgaaatggagaaacacgatttgaagaagaagaagaagaagaaggaataaattactctgctcaatcgac  16648000                                                                            <------------CBF                 --------->WRKY45                                        <---------DAG2                 ----------->HVH21                               <---------AHL20(2)                 --------->WRKY12                               <---------AHL20(2)                 --------->WRKY38(1)<---------AHL20(2)          --------->AHL20(2)           *TSS<----------DOF2     --------->AHL20(2)           <---------AHL20(1)             <-----   --------->TOE2(3)               <---------AHL20(2)       --------->AHL20(2)     ----------->GT1 --   --------->TOE1(3)         <-----------GT1           <-------TEIL      <----------DOF2    ---------   aataaccctaaaattctctttgaccctgttttttcattttaatttgtttttatgaagtccatgtaattaattttgctttattgttttgtaatttgttctt  16648100         <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(2)     --------->ATHB51     <---------ICU4                                              <---------AHL20(2)    --------->ICU4                                               --------->AHL20(2)    <---------YAB1                                 <---------CCA1(2) <---------AHL20(2)               ---------->DOF2--------->AHL20(2)  <-----------GT1 -----DOF2       <---------ICU4<----------DOF2   --------->YAB1 --------->AHL20(2)             <----- ------->ANAC55(2)  <-----------GT1 <---------TOE1(3)        --------->AHL20(2)                <----- ->ID1 <---------YAB1<-----------GT1<---------TOE2(3)   --------->LBD16<-----------------AGL3  <-----   tatgtaattattttttgaatttttacccttgcactttaaaggttttctgaattatatccccaaatatttaattactaaatttgaaactttagaaattgtg  16648200                                                                                                    <                                       <---------AHL20(2)                                       <----                                       --------->AHL20(2)                   <------MYB46(1)     -----                                       <--------ATHB1                       <------MYB83        -----                                       <---------ICU4                      --------->MYB59      <----          <-----------GT1              --------->ATHB51                    <---------AtMYB61   ------    <----------DOF2                   --------->ICU4                       --------->MYB46(2)  <-----    --------->TOE2(3)                 <---------ATHB51--------->ZAT6     <---------MYB52(1)---------- ----ANAC58                         --------->YAB1 <-----------GT1     <---------MYB46(3)  --------->ICU4 ----ANAC58               <-----------GT1  <-----------GT1           <---------MYB52(1)   --------->ANAC55(2) ----ANAC46            --------------->AtSPL8   <---------ICU4   ------->TEIL   <---------HSFB2a(2) -   tgttaactttagtaacaaaacttattttgtactatttgtaataatttcccttattaccactactatgaacccttggttaggtctagtagtttacttatta  16648300     --------->DAG2   ---------->DOF2 ---------AHL20(2) -----AHL20(1) ---->AHL20(1)                                                           --------->YAB1            <- ---->AHL20(2)                               <---------ARR11(3)         <-------TEIL            ----- -----AHL20(2)                    ------->MYC3                      <---------YAB1          ------>ZmHOX2a(1) --->AHL20(2)          --------->YAB1        --------->ARR11(3)   <----------DOF2           ========= ----AHL20(2)          ----------->GT1      --------->YAB1      ------>MYB83                --------- ----->AGL15 ---------->DOF2      <-------MYC3 ------>ZmHOX2a(2)------>MYB46(1)             <-------- -------->AHL20(2)    <---------YAB1   <---------YAB1          <---------ALFIN1          ---------->ID1   aattaaaaaggctataaaagaaatatgataaaaacatgtgtatgaatgatcttgagcttgaagacccactttgattcataaactagctcttgtcctttgt  16648400                 --------->MYB46(2)                 --------->MYB111(1)                 --------->MYB52(2)                 --------->MYB59                                               <------MYB83                 >>>>>>>>>>AtMYB44                                             <------MYB46(1)               <---------MYB52(1)                                             --------->MYB59         <-----------GT1                                                      --------->MYB111(1)     <---------AGP1                                                           --------->MYB52(2)     --------->ARR11(3)                                                       --------->MYB46(2)     <---------ARR11(3)                                                       --------->MYB111(2)     <---------ARR14(2)                                                      <---------MYB55(1)     <-----------ARR10                                                      <---------MYB52(1)     --------->ARR14(2)                                             --------->ATHB12    <---------CCA1(2) <---------YAB1                                --------->YAB1 ---------DOF2------------>MYB.PH3(2)                               <---------ICU4 ----->ID1-------->P <---------At5g28300    --------->CCA1(2)      --------->ICU4 =============HOX2a_HOX2a                <---------YAB1            <---------YAB1     ----------->GT1 ------------>WRI1  <-----------GT1    --------->YAB1      ------->TEIL    <-------GAMYB      ------- --DOF2------>ZmHOX2a(2)              <---------YAB1     <-------TEIL   <---------At5g28300 <--------   tcttttggatcttaccagttagttaccatcgatagtcgatatgatgatatgctccaaaatgcatcttcgatgattaccgttaggtagtttgttataacca  16648500  Previous    Next  AGI:  At5g41580.1    Description:  zinc ion binding. similar to EMB3001 (EMBRYO DEFECTIVE 3001), zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G08910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65899.1); contains InterPro domain Zinc finger, MIZ-type; (InterPro:IPR004181) Range:  from: 16643565    to: 16648011    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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