Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <------ZmHOX2a(2)          --------->MYB52(1)                                                           --------------       --------->HSFB2a(2)                  --------->STY1(2)              <---------At4g35610   --------->TOE1(3)                        <---------STY1(2)              --------->At4g35610   --------->TOE1(2)                       --------->ANAC58             <---------At4g35610   --------->TOE2(2)                       --------->ANAC46     <-----------HVH21 <---------ICU4  <---------HSFB2a(1)         <----------DOF2                   <-----------TGA1 <---------ATHB51 ---  --------->HSFB2a(1)        <---------ICU4--------->ANAC58    --------->ANAC46  <---------AHL20(2)   tcaaaccttcgataacagatcaaaactctaatctttaactgatacaagctagttgaaacttgtcttcgtcacttagcagctaaattatggccaaatggaa  16639500                                                                        --------->At4g35610                                                                       ------->GAMYB                                                                      --------->MYB46(3)                                                                    ----------->RAV1(1)                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)          ---------      <---------YAB1   --------->WOX13(1)                       <---------ARR11(3)    <---------ICU4    --------->YAB1   <---------ATHB12                           --------->ARR14(2)    --------->ATHB12    <---------ICU4 --------->WOX13(1)                           <---------ARR14(2)   --------->ICU4   --------->ICU4<------ZmHOX2a(2)                              --------->ARR11(3)   <---------YAB1 --->AGL1       <---------ARR11(3)   ----------->GT1            --------->AGP1     --------->YAB1 ------>YAB1    --------->ARR11(3)<---------ICU4          <-----------GT1         <---------YAB1   tcagaattatgattctaagatcaatcaatctgacaaaaatggctaatttgtattggtttttcacaagatccaacagcaaactcgatgataattgaaaaga  16639600                        <---------At4g35610                        --------->At4g35610             ----------->HVH21            <---------MYB52(2)            --------->DEAR3(2)           <---------At4g35610           --------->At4g35610          <-------TEIL       --------->HSFB2a(2)             --------->CCA1(2)   <----------DOF2 --------->ANAC58   --------->ARR14(2)                           <---------AHL20(2)   <---------DAG2  --------->ANAC58   <---------ARR14(2)    <----------DOF2<------ZmHOX2a(1)   <----- ->DOF2<---------HSFB2a(2) --------->At4g35610      <-----------GT1    ---------->DOF2  <-----------GT1   tggaactttttggaactgaccaagtaagcagcaaaacccagatacacattcgaattacatctctttgaatcaacaaaggacacattttttttccaatacg  16639700                      --------->LBD16                     <---------ANAC46                     <---------ANAC55(2)                     ----------->GT1                     --------->ANAC55(2)                    <-------TEIL                    ------>ZmHOX2a(2)                  --------->ARR14(2)                  --------->AGP1                                             ========================                  <---------ARR14(2)                                         ------>ZmHOX2a(2)                  <---------GLK1(2)                                        <---------ARR14(2)                ----------->ARR10                        --------->MYB52(1)--------->ARR14(2)    ---------->DOF2<------ZmHOX2a(2)                   <---------MYB52(2) <------ZmHOX2a(1) --------->ANAC58<---------At4g35610              --------->ANAC58       --------->HSFC1(2) --------->ANAC58--------->At4g35610              --------->ANAC58       <---------HSFC1(2)--------->WRKY38(1) -----ID1<---------MYB59     ----------->GT1<---------LBD16              <---------HSFB2a(1)<--------   accaagtaaagcctaactcagatccgtaaaattgaaaaattgaatttgggggaagaaactaacagagggattagaaggatcggagggacgatgttgactg  16639800                                                                =====================================                                                               ------>ZmHOX2a(2)                                       ------>NtERF2         --------->ARR11(3)                  --------->ANAC58    --------->ANAC46       <---------ARR11(3)                  ----------->GT1     --------->ANAC58       <-----------ARR10                  --------->ANAC58    --------->ANAC58   --------->YAB1         <------ZmHOX2a(2)       <-----------ARR10     <---------WOX13(1)                       =====       <------ZmHOX2a(1)<---------ATHB12             --------->ATHB12                           <---- =============HOX2a_HOX2a        --------->GLK1(2)  <---------YAB1                              <---- -WRKY18(1)---------->DOF2      <---------GLK1(2) --------->YAB1<----------DOF2     *TSS      -------   aaattgtgaggatcaaaggaaggcaaatcacccagaatcgacgccattggaatcgtgattgatgatctttccttctcttcagacagagagagagagagac  16639900                  --------->ANAC58       ---------->DOF2                               --------->HSFB2a(2)     ----------->TBP                                 --------->HSFC1(1)   --------->CCA1(2)                            -------->P  <---------ARR11(3)   --------->DAG2           ------>MYB46(1)  --------->ARR11(3)  ---------->DOF2           ------>MYB83 --------->ZAT2 =====bZIP_DOF    --------->ANAC58             <---------ALFIN1 =================bZIP_DOF                    <---------MYB59--------->At4g35610      --------->YAB1 -----O2          <----------ID1       <------------CBF <<<<<<<ZML2   <---------AHL20(2) -----TGA1a<----------ID1          --------->PCF2    <---------HSFB2a(2)<---------TOE2(3)        ---- -->CCA1(2)----------->GT1         <---------PCF2 --------->ZAT6     --------->AHL20(2)         <----   gagagatataaaagggagaaacgaaaaagggtttatgggcccattgggcctacctctagaaccagcttcaaattaatgtttctctaaataacaatagaga  16640000                                                 ----------->GT1                                                 <----------ID1                                               ---------->DOF2                         <------ZmHOX2a(1)                                          <---------------AGL15                    --------->TOE1(2)                                    --------->AHL20(2)                           <-------TEIL                                    <---------AHL20(2)                       <---------YAB1                                   <---------AHL20(2)                      <---------ICU4       --------->AHL20(2)          --------->AHL20(2)                     <---------ATHB51  <---------MYB52(1)    ---------->DOF2 <-----------GT1                   --------->ICU4 ----->GLK1(2)     <---------YAB1  --------->AHL20(1)          <---------YAB1<---------TOE2(3) -----GLK1(2)   ------->TEIL       <---------AHL20(1)    --------->AHL20(2)--------->YAB1   ttctgttttttatatatgaatatgaataaagaaacaatttatttacaaaaaaagaaaaaaaaaatatgaataaacaattatggttcataggaatatttca  16640100                                                                             <---------ARR14(2)          <---------ANAC58                                                   --------->ARR14(2)          <---------ANAC58                                                   ------->TEIL        <---------AHL20(2)                                              <---------DOF5.7(2)    --------->AHL20(1)                <---------YAB1           <---------AHL20(2)    <---------AHL20(2)            <----------DOF2              --------->AHL20(2)                  --    --------->AHL20(2)            <---------DAG2              <---------AHL20(2)                  <--   --------->AHL20(2)         <-------TEIL                    --------->AHL20(2)                  ---   agaaaattaattaagtgcctatatcaacaaggttcactttttgattctataatttgtgttgaaatttttttagtaaacgtatttgagttaatcggttcaa  16640200                                                           <---------At4g35610                                                           <---------LBD16                                                           --------->At4g35610                                                        <---------HSFB2a(1)                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                                       --------->GLK1(2)                                                --------->ICU4                 ----------->GT1                                                <---------ATHB51               <---------ZAT6                                             --------->AHL20(2)              <---------ANAC58                                             <---------AHL20(2)              <---------ANAC58                 <---------AHL20(2)         --------->AHL20(2)   <------MYB83<---------ANAC46           <---------TOE2(3)                <---------AHL20(2)   <---------MYB46(3)      <---------YAB1 <---------AHL20(2)              <---------ANAC58     <---------GLK1(2)<-----------RAV1(1) ------->CCA1(2) --------->AHL20(2)         --------->AHL20(1)   <------MYB46(1)        --------->AHL20(2) -------ARR11(3)--------->ICU4   <---------ANAC58  <---------TOE2(3)  <---------TOE2(3) <---------AHL20(2) ------>ARR11(3)<---------AHL20(2)          <---------AHL20(1)  <---------AtMYB61     <---------AHL20(2)   gatataatctattaagaaattattttcaaatttgtgcgagtgaaaataaaattatggaatctgcggatggtttatgttggagtgttatatttttatagaa  16640300                                                                  <---------AHL20(2)                                                                 <---------AHL20(1)                        --------->ARR14(2)                   --------->AHL20(2)                      --------->ICU4                         <---------AHL20(2)                 <---------ANAC55(2)                        <---------WOX13(1)                 <---------ANAC58                         --------->ATHB12                 <---------ANAC46                ----------->GT1 --------->AHL20(2)                 <---------ANAC58          --------->HSFB2a(2)   <---------AHL20(2)          <-------   ----------->GT1  <---------TOE1(2)      <---------HSFB2a(2)<---------AHL20(2)   ------>ZmHOX2a(2)-   tcgataagtgaatttgatttcgtaagtattctccaaaattgttttctagactagtcaaattgattaatttttttttatattttgatctcaattcactttc  16640400  Previous    Next  AGI:  At5g41560.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65907.1) Range:  from: 16638479    to: 16639884    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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