Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->MYB46(3)               --------->ANAC58                                                           <----------DOF2         --------->ANAC58                                                           --------->ANAC46         --------->ANAC58                    <---------ICU4                   <---------ANAC58        --------->SPL7                       --------->YAB1                 --------->ARR14(2)       <---------MYB52(1)     <-----------HVH21 --------->YAB1      <---------MYB46(3)<---------CCA1(2) -----YAB1     --------->ANAC58             --------->ICU4    <-----------RAV1(1)  <------NtERF2 -ARR14(2)     --------->ANAC46         <-------TEIL          --------->ALFIN1<---------ANAC58<------   gaataaaccgtaagcacaaacaaccttgtctaggtcagtaaatgcattaatgacaatctcatatgtgtggctgttccagttcgtccccgtctctttgcat  16619400                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                      <---------MYB111(2)                       <---------ARR14(2)                      <---------MYB111(1)                       <---------AGP1                          <------------MYB.PH3(2)                       --------->ARR11(3)                      <---------MYB46(2)        <---------ANAC46                       <---------ARR11(3)                      --------->MYB46(3)        <---------ANAC58                       --------->ARR14(2)                    <-----------GT1             <---------ANAC58                       <-----------ARR10                     ------->TEIL               <---------STY1(2)                       --------->AGP1             ----------->GT1                       <---------ZAT2                      <---------CCA1(2)       <---------AHL20(1)                        --------->STY1(2)                  ------>ZmHOX2a(2)           --------->AHL20(1)                    --------->ZAT2                 <------ZmHOX2a(2)            --------->ARR11(3)                    --------->STY1(2)                <---------ARR14(2)            --------->AHL20(2)                   ------>MYB83                --------->ARR14(2)            <---------ARR11(3)   --------->TOE1(3)<---------STY1(2)                <---------ARR11(3)            <---------AHL20(2)   --------->TOE2(3)<---------ZAT2 ---AtLEC2      --------->ARR11(3)  --------->TOE2(3)     --------->ANAC55(2)      ------>MYB46(1)   agagtcttagctcgacaagatcccagatctaaacaatgccttagtcaatatattgtatatatgtaactaccttaggctcaaaacctagctagcttgttca  16619500                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                             <---------CCA1(1)         <------ZmHOX2a(2)                                                            <---------ARR11(3)        <---------ARR14(2)                      <----------DOF2         --------->ANAC46                        --------->ARR14(2)               <---------YAB1                 --------->ANAC58             --------->MYB46(3)             <---------ICU4  <---------ARR11(3)             --------->ARR11(3)       <------ZmHOX2a(1)            <---------MYB52(1)                --------->ANAC58 <---------YAB1  --------->YAB1   tagaagacatcatcgttatgactcctttcaatatcgttctccttgtataagccattgatatagatattataggtataacaaacatcaggatcagctcatc  16619600                                             --------->MYB46(3)                                    ------>NtERF2                                   --------->ANAC58                                 ------->GAMYB------->GAMYB                                 <---------ALFIN1                                --------->MYB46(3)                              ------->GAMYB  <---------MYB52(2)                             <---------MYB111(1)                             <---------MYB111(2)                             <---------MYB55(2)                    --------->SPL7 --------->ANAC46         <---------MYB52(2)    ---------->DOF2                --------->HSFB2a(2)--------->ANAC58    ----------->GT1         ------>ZmHOX2a(1)                <---------------AtSPL3       <---------MYB55(2)                --------------->AGL15                <---------------AtSPL8  --------->AtLEC2    --------->MYB46(3) <---------------AGL15               <---------ANAC46-------->P  ----------->RAV1(1)                 --------->LBD16            <----------DOF2  --------->MYB46(3)--------->MYB52(1)         --------->GLK1(1)        <-   aaactacttgtctactttcgggtactgcccaacaaccacgccttgcaacaaacgattgtgtaacaaacaatatcggacttcctgaaaagagaagtcacaa  16619700                       --------->RAP2.6(2)                    --------->ANAC58                    ------>MYB46(1)            --------->GLK1(2)                    --------->ANAC58          <---------GLK1(2)                                <-----                    --------->ANAC46 --------->LBD16                                      <----------      <---------ZAT14--------->ZAT2 --------->LBD16                                       <-------GAMYB      --------->ZAT14<---------ZAT2<---------LBD16 --------->LBD16               --------->ALFIN1 ----------GT1      ------>MYB83<---------GLK1(1)<---------LBD16        <XXXXXXXXXXXXXXXXXXXXMIR782   tataccagagaagtgagaaaccaagcagccatggaatccctgaaaatagattccggtgtatcgaacttcttagagaattcaaggtgttagtctgttagag  16619800                                      <---------ZAT18                                      ------>NtERF2                                     --------->DEAR3(1)                                    --------->DEAR3(2)                                              -                                    --------->MYB46(3)                                            <--                                   <---------At5g28300                                           <---                           <---------GLK1(2)                                              --------->ARR11(3)                 *TSS      --------->ARR11(3)                                             <---------ARR11(3)               --------->YAB1     <-----------GT1                                        --------->GLK1(1)              <---------YAB1--------->GLK1(1)                               <---------GLK1(1)    <---         <---------ANAC58  <---------ARR11(3)                               --------->CCA1(2)   -----         <---------ZAT6    --------->ARR14(2)                              --------->ARR14(2)   <----     <---------MYB52(2)    <---------ARR14(2)                  --------->ARR14(2)        <---------GLK1(1) ----TOE2(3)  --------->ICU4<---------RVE1(1)                  <---------MYB52(1)      <------ZmHOX2a(1) -HVH21  <---------ANAC58--------->LBD16            <------ZmHOX2a(1)      <---------ARR14(2)   -----   gttttcaactagcgttatgatcaaacccagatattcttaccgcccttaccaagaggacatgttcagttatgctcttggatatgagaataggaaatcttgt  16619900           <---------ANAC58         --------->ARR11(3)         <---------AHL20(2)    <---------MYB52(1)                                                 --------->TOE2(2)    --------->DOF5.7(2)                                                --------->TOE1(2)   --------->TOE2(3)                                                 <---------ARR11(3)   <-------GAMYB                                                  <XXXXXXXXXXXXXXXXXXXXMIR4243  ----------->GT1                                                --------->ANAC58 -------->SPL7                                                   --------->ANAC58 -------SPL7                                                    --------->SPL7 ------ANAC58  <---------TOE2(3)                              <---------SPL7 ------ANAC58  <---------TOE1(3)             ---------->DOF2 <---------ANAC58                     xxx ---------->AtSPL3                     --------->MYB46(3)    <---------ANAC58              <xxxxxxxxx -----------AtSPL3             <---------AHL20(2)           <---------------AtSPL3        <-------TEIL ----->ID1 <---------ANAC58    <-----------GT1              <---------------AtSPL8      <xxxxxxxxxxxx   cgtaccgttaatttcttgaggtttgtagactatttacttcaacgactcaaagagagtgtttttgggtacgaaatctacgattttgacttagattcatgga  16620000                 <---------ALFIN1                <---------ZAT14  <---------ANAC58               <<<<<<<<<<<<<<<<<LFY  ----------->HVH21              <---------ZAT18    <---------ANAC58              --------->ZAT14  --------->AHL20(1)              <---------ZAT14  --------->ARR11(3)        <-----------HVH21      <---------ARR11(3)       --------->bZIP60(1)     <---------AHL20(1)                           --------->ANAC58       <---------bZIP60(1)    --------->RVE1(1)                             --------->ANAC58 xxxxxxxxxxxxx>smallRNA(i)    --------->CCA1(1)     --------------->AGL15 <---------ANAC58 xxxxxxxsmallRNA(i)    <---------ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxsmallRNA(le3) --------->AHL20(2)        <---------------AGL15 <---------ANAC58------->TEIL   caactcttgatgtcagtccacactggcatataatatcttgtgaccttggcattactcttaagagaaacacttactggcatgctagagaaatgaatttaga  16620100                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                       <---------MYB52(1)                                                                       <--------P                                                                      <-------GAMYB                                                                     <---------DEAR3(2)                                                                     <---------MYB46(3)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    <---------ANAC46                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    --------->ATERF1(2)                                                                  ------>NtERF2               --------->ANAC55(2)                               ----------->HVH21        <---------YAB1               <---------ANAC55(2)                             <---------At4g35610        --------->ICU4            <------ZmHOX2a(2)                                  --------->At4g35610      <---------ICU4    <---------ARR11(3)           <-----------GT1         --------->At4g35610           <---------YAB1    --------->ARR11(3)       <XXXXXXXXXXXXXXXXXXXXMIR859 <---------At4g35610 --------->ALFIN1<-------   --------->CCA1(1)       <---------YAB1            xxxxxxxxxxxxxxxx>smallRNA(i)      --------->ICU4   --------->RVE1(1) <---------AHL20(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <-------TEIL-----   agaaaatatcgtcgatcacataatatgttttgattttacaagagagagatttagaccgcttctgcctctgccggttagcgttggggttcatgattatgaa  16620200                                      <---------DAG2--------->ANAC58                                    ------>NtERF2   --------->ANAC58              <---------ZAT6      ---------->ID1    --------->ANAC46            <---------ANAC58  <---------ANAC58   --------->ZAT14     <----------DOF2          <---------ANAC58   <---------ZAT14     <---------DAG2          <---------HSFC1(2) <---------ALFIN1  <-----------GT1  <---------HSFB2a(2)<----------DOF2                                               < --YAB1     <---------ANAC46 --------->HSFC1(2)<---------At4g35610                            <------ -->TEIL    <---------ANAC58--------->GLK1(2)  --------->At4g35610                            <------   tatttgactttatctcgtgttagagaagagaagcttgccgctttatttcagcacaccgaatcaaatccatatgagcttgaaatatggattacaactaaga  16620300  Previous    Next  AGI:  At5g41494.1    Description:  pseudogene of F-box family protein Range:  from: 16619817    to: 16620666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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