Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ALFIN1       --------->bZIP60(1)                   --------->ALFIN1       <---------bZIP60(1)                <---------DEAR3(1)    ----------->HVH21                 <---------HSFB2a(1)              --------->At4g35610  --------->At4g35610             ------->GAMYB                  ---------->DOF2       <---------WRKY12  <---------At4g35610          --------->MYB52(1)        --------->YAB1<---------At4g35610 <---------ARR11(3)  --------->ZAT2              <---------WRKY12           --------->ATHB12              <---------WRKY38(1) --------->GLK1(2)           <------ZmHOX2a(2)         --------->GLK1(2)              --------->WRKY18(1)   cagaagctgacatcggtggaggtaagattagatcaacggagtcttcggtgttgaaagaatcatggataaaagctgctgatgaattggggtcaaggtctat  16615600                                 ---------->DOF2                               ------>ZmHOX2a(1)                              --------->TOE1(3)  <---------GLK1(2)                              --------->TOE2(3)  --------->ARR14(2)                               <--                         <------MYB83<---------ANAC58                                             ---                         <---------ANAC58        --------->ARR11(3)                               <--                         <------MYB46(1)         <---------ARR14(2)                           <------                         <---------ANAC58        <---------ARR11(3)                      <---------YAB1 --------->At4g35610    <---------MYB46(3)     --------->ANAC46                        ----------->GT1 <---------HSFB2a(1)   <---------ANAC46  <---------ANAC58                          <------ZmHOX2a(1) <---------HSFC1(2) --------->ALFIN1 <---------ANAC58                           <-----------RAV1(2) --------->HSFC1(2) <-----------RAV1(1)  <---------ANAC58   ----------->HVH21   <---------LBD16  <---   ggaagcttcagaaaacaaaactgtgttgggttccttaaagcttgcctacaagatactcagcgatgacacaacaagtagtgactcaggaatggttatagtc  16615700   <-------TEIL                                           <----------DOF2 --------->ARR14(2)                                     <---------YAB1 <---------ARR14(2)                                   <---------CCA1(2) -------ANAC55(2)                                    ------>ZmHOX2a(1) ------>ANAC55(2)--------->ARR14(2)                 --------->TOE2(3)                               - -------ANAC46   <---------ARR14(2)          --------->AHL20(2)        ----------->GT1              - -----HVH21      ------->TEIL  <---------GLK1(2) <-----------GT1     <---------ANAC46          <----- ------LBD16    <---------CCA1(2)          --------->TOE2(3)<-----------GT1               <---------ZAT6   acgggttcgcttcacattgtatcttcagtcttagcttctcttcaacattaatttccttatctttacgagtctcttgtaaaaaaactcagtttgtgttaaa  16615800                                                           <---------HSFB2a(2)                                                      <---------HSFB2a(1)                               --------->At5g28300    --------->HSFB2a(1)               --------->HSFB2a(2)            --------->MYB111(2)               --------->LBD16--------->TOE1(3)     <-----------GT1               <---------HSFB2a(2)            --------->MYB55(2)                                    -     --------->ARR11(3)       --------->TOE2(3)<-------GAMYB ---------->DOF2              --------->AHL20(2)     <---------ARR11(3)     ------->TEIL      --------->MYB52(2)                    --------->ANAC58- ----->MYB83  <---------LBD16 ----------->GT1 --------->MYB111(1)     <------NtERF2 --------->ANAC58- ----->MYB46(1)------>ZmHOX2a(1)              <---------MYB46(3)    <---------------------WRI1 ====== ------GT1   ----------->RAV1(2)             <--------P    --------->HSFB2a(2) ---------->DOF2 ------   ccaaacaaatctttttcctggaacatcatgaaccgtaacatttgatggtagttgaaaccttctgaaagaggcagagactttcaaagaagcaaataaacaa  16615900                                         <---------ANAC58                                         <---------ANAC46                                --------->ANAC46                         ----------->TBP        --------->ICU4          <---------O2                           <---------------AGL15        <---------YAB1          --------->O2                           --------------->AGL15 <------MYB83                   --------->TGA1a                       ----------------->AGL3 <------MYB46(1)<---------REM1(1)        --------->ANAC55(2)     --------->At4g35610     <---------MYB46(3) -------->MYB111(2)             <---------ALFIN1          <---------ANAC58              <---------AtMYB61 -------->MYB46(2)            <---------ALFIN1   --------->YAB1  <---------At4g35610    --------->ALFIN1 -------->MYB111(1)        ---------->ID1<---------ANAC55(2)   <---------ZAT18       --------->ALFIN1 =========================================bZIP_DOF        <---------ANAC58  ---------->DOF2    <----- ---->DOF2 <---------YAB1  --------->PCF2<---------ANAC58 <---------ANAC46 <---------AHL20(2)<-------   agtaggtgagattattagttgtagtttttgtcccacatcgcttacgtagaatagtaagaggcttgtgagcttactatataaagagaagaggtggttcagt  16616000                        *TSS                    --------->ANAC58                --------->ANAC46                --------->ANAC58                --------->ANAC58              <-----------RAV1(2)                                             --------->At4g35610            ------>ZmHOX2a(1)                                                 <---------At4g35610          ------>ZmHOX2a(2)                                    --------->ANAC55(2)          ===================================HOX2a_HOX2a       <---------ANAC55(2)        --------->ARR11(3)                ----------->GT1      <---------ANAC58      <---------YAB1--------->ANAC58  <------ZmHOX2a(1)        <---------ANAC46 --GAMYB<---------ARR11(3)        --------->ICU4        <----------DOF2  --------->ZAT18 ----RAV1(2)<-----------HVH21   xxxxxxxxxxxxxxx>smallRNA(se3)  <---------ANAC58   ---------->DOF2 ---   tggaaagtatgatccttcaggcaagttataggggaaatgaggaatggttataatctcgctttaatgcgtgatgagcgctccgctcaaagcctgttacgac  16616100                                                                                           <---------AHL20(1)                                                                                           --------->AHL20(1)                                                                                           --------->AHL20(2)                                                                                         --------->AHL20(1)                                                                                         --------->ARR11(3)                                                                                <----------ID1     --                <---------YAB1                                                 ----------->GT1     <-      --------->At4g35610                                   <-----------GT1   --------->DAG2  <------     xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 --------->YAB1       <---------------AtSPL8    --------->ZAT18           ------>ZmHOX2a(2)        --------->AHL20(2)    ---------->DOF2  -------    <---------ZAT18<-----------GT1               <---------DAG2       --------->ZAT6     <---------AHL20(1) ------>ATHB12 --------->AHL20(2)                <----------DOF2    <-----------GT1      <---------ARR11(3)   taattgggcgctccaatttttatacaatctgatccctctcttgtccaaacacttttttaaaataacattttcactctaaaaaagtacaaaaaatatttta  16616200                                   <---------YAB1                                  --------->AHL20(2)                                  --------->AHL20(1)                                 <---------ICU4                              <---------AHL20(2)                             <---------AHL20(2)                             --------->AHL20(2)                          -------->HAHB4                          -------->ATHB1                          <--------HAHB4                          --------->YAB1                          --------->ATHB51                          <---------ICU4                         --------->ICU4            <-----------GT1    <------MYB46(1)           <----------DOF2<---------AHL20(2)  <---------AHL20(2)      <------MYB83        <-----------GT1  <---------YAB1       --------->AHL20(2)     --------->ALFIN1  <---------AHL20(2)     <---------ATHB51    --------->AHL20(2)     <--------P  --------->AHL20(2)   --------->YAB1<---------AHL20(1)             --------->ALFIN1 ------->AHL20(1)      <---------ICU4<---------AHL20(2)             <<<<<<<<<MYB98 --------AHL20(1)     <---------AHL20(2) <-------TEIL              <-------GAMYB                 ---- ---AHL20(2)          <---------YAB1 --------->AHL20(1)       <---------ANAC58                  <---- -->AHL20(2) <-----------GT1<---------YAB1--------->YAB1      <---------ANAC58                -------   atatataaattttctttacagtttataattattaaatattatattcataaaattatcccaatgggcttgggttgggccttataagttatattccagttat  16616300                                                                                              -------                                                                                --------->GLK1(1)                     <-----------GT1                                            <---------GLK1(1)                --------->AHL20(2)                         --------->ATHB12     --------->CCA1(2)             <------ZmHOX2a(1)                            <---------YAB1        <----------TaMYB80             ----------->GT1                             <-----------------AGL1<---------ARR14(2) ----->YAB1 ----------->GT1                          --------->YAB1            --------->ARR14(2) -----YAB1  <----------ID1                          --------->ICU4<------ZmHOX2a(1)         --------- -->YAB1 ---------->DOF2     ----------->GT1   <---------YAB1   <---------TOE2(3)      ----------->GT1   aatagtccaaaaaaaggataaattatctattttgtaaaacaatttagttatgaaatgataaccattgaggaaattacaacggatatgcacagaaaaaaga  16616400        <---------ANAC58                                                       ----------->GT1        <---------ANAC58                                                       <----------ID1        <------MYB46(1)                        <---------YAB1                 ----------->GT1        <---------ANAC46                  --------------->AGL15               -----------------------        <------MYB83                      <---------------AGL15      --------->ANAC58               <       --------->MYB59                   ----------------->AGL1      --------->ANAC58--------->AHL20(2) ---->GT1                               <-----------GT1    ------------------------>ANAC81 ---------- ->DOF2<---------MYB46(3)              <-----------GT1 ---------->DOF2 ---------->DOF2    --------->AHL20(2)   aaattaagttgggtaagagagagagtgatgttttgatatttttacccttatgagagaaaaagagatagaaaacgaaagagaaggaaaaaaaataaaagaa  16616500  Previous    Next  AGI:  At5g41480.1    Description:  GLA1 (GLOBULAR ARREST1); tetrahydrofolylpolyglutamate synthase. similar to ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT3G55630.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO69362.1); contains InterPro domain Mur ligase, central; (InterPro:IPR013221); contains InterPro domain Mur ligase, C-terminal; (InterPro:IPR004101); contains InterPro domain Folylpolyglutamate synthetase; (InterPro:IPR001645) Range:  from: 16613155    to: 16615864    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g41471.1    Description:  SNOR108; snoRNA Range:  from: 16616024    to: 16616133    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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