Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------AtLEC2                                 --------->ARR11(3)                                       <---------ANAC58                                 <---------ARR11(3)                                <-----------GT1                               <---------ANAC58                                <---------AHL20(2)                            ----------->RAV1(2)                 <---------ARR11(3)    <---------ANAC58                       <---------ANAC58      <----------DOF2       <---------AHL20(2)                         --------->ARR11(3) -----GT1        --------->ARR11(3)<----------DOF2        <----------DOF2------>ZmHOX2a(2)       <--- ----GT1 --------->ATHB12   --------->AHL20(2)           <---------DAG2<---------ARR11(3) ------>ZmHOX2a(2)   ctttcattctttgattagagatgttcgagtttaattactttgcatggtctaaaaattggccttttgaagttgtgatcttggcctgagactgatcttgaac  16610800                                                                                             --------               <---------ARR11(3)                                                          --------->LBD16               --------->ARR11(3)                                                        <---------LBD16        <---------WOX13(1)                                                              --------->MYB52(1)      --------->ATHB12                        --------->AHL20(2)                       --------->ARR14(2)     <---------YAB1                          --------->AHL20(2)                        <---------ARR14(2)  <----------DOF2       <---------TOE2(3)    <---------AHL20(2)                    ---------->DOF2 <---------ANAC58<---------MYB59         --------->AHL20(2)                      --------->YAB1 <---------ANAC58------>ZmHOX2a(2)       <---------AHL20(2)                   --------->WOX13(1) -------DOF2<---------WOX13(1)          --------->AHL20(2)       <-----------GT1<---------ATHB12   tttgcttttgattgaatgatctaactatggataacttcaaaattaaaataaataagtctacaaaatttaaccatgtgatgcaatcaaaagaaccggaaag  16610900                                                                                 ----------->GT1                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                  <---------GLK1(1)                                                                  --------->GLK1(1)                    --------->ARR11(3)                           --------->ARR11(3)           <---------YAB1                               <----------TaMYB80     ---------->DOF2         --------->CCA1(2)                 <---------YAB1        <---------ARR11(3)         --------->GLK1(1)     <---------MYB52(1)       --------->GLK1(1) --------------->AGL15        --------->ARR11(3)    --------->TOE1(3)         --------->CCA1(2) <---------------AGL15        <---------ARR11(3)    --------->TOE2(3)        <---------ARR14(2)----------------->AGL3        --------->ARR14(2)   <---------ANAC55(2)       ---------->TaMYB80<-----------------AGL3     -      ----------->ARR10      ----------->GT1   --------->YAB1  <---------TOE2(3)--------->DAG2-------     <------ZmHOX2a(1)--------->YAB1--------->YAB1     --------->ARR14(2)============================ -->DOF2<---------ARR14(2)  <-------TEIL <-----------GT1<---------GLK1(1)<-----------------AGL2   ---   ttttggaggagatatgcttagttatcttgatacgttaatcgtattactatagtaagggatatgctaagatttcttgctacataaagtaactaagaacatt  16611000                                                                                            <--------       <---------------AGL15  --------->ANAC58                                        ------>ZmHOX2a(2)       --------------->AGL15  --------->ANAC46                                ------------>CBF      --------->REM1(1) <----------DOF2                                      ================HOX2a_HOX2a ----------->GT1     <---------ARR11(3)          --------->YAB1    --------->ANAC58 <---------ARR11(3) -------->DAG2       --------->ARR11(3)--------->TOE1(3)           --------->ANAC58 --------->ARR11(3) -->TOE2(3)      ---------->DOF2       <----------DOF2            <---------ZAT18  --------->YAB1 ======================MADS_MADS       --------->TOE2(3)    --------->YAB1   ------>ZmHOX2a(1)      < ------->DOF2 ----------->GT1 --------->ANAC58  <---------ATHB12  --------->ZAT18 <---------ATHB12<--   aaaaggttacaacaagaagtaaagaactttacaagaaacaactttaacaaatcatatatgaagcatagttcgcaaactcctccaatgatcttcacattct  16611100           <---------YAB1          --------->AHL20(2)          <---------AHL20(2)         --------->YAB1         <---------AHL20(2)                          --------->At4g35610      <--------HAHB4                              <---------ANAC58      --------->ATHB51                            <---------ANAC58      <---------ICU4                           ---------->ID1     <---------YAB1                          <-----------RAV1(1)     --------->ICU4                  <---------AHL20(2)   --------->YAB1                    --------->AHL20(2)   --------->TOE2(3)      --------->YAB1 <---------AHL20(2)               ------------>CBF         <- -GLK1(2)--------->AHL20(2)         <---------AHL20(2)                <-----------GT1              <- -----------GT1       --------->AtMYB61  --------->AHL20(2)      --------->YAB1              <------- --------DOF2       ----------->RAV1(1) <---------AHL20(2)      <-------TEIL                 <-------   ctttaccataattaaaattctccaccaaaaataacaaaattatttatttgtcgcttgctgaagcgattcatattacaacaatggcctccatggttaatgt  16611200                                                           --------->ARR14(2)                                                           <---------ARR11(3)                                                           --------->ARR11(3)         <---------ICU4                                    <---------ARR14(2)                      --      --------->YAB1                                       <---------AGP1                         <--     <---------YAB1                           --------->ANAC46 ------->TEIL            --------->At4g35610   --------->YAB1               ------>MYB83  --------->ANAC58 -------->P              <---------At4g35610 --------ANAC46    --------->GLK1(1)          --------->ANAC58<-----------GT1          <-------GAMYB --------ANAC55(1) <---------GLK1(1)         <---------LBD16 ------>ZmHOX2a(2)     --------->STY1(2) --TOE2(3)    <---------ANAC46  ------>MYB46(1)            --------->AGP1--------->REM1(1)      ----- --TOE1(3)    <---------ANAC55(2)           <---------ALFIN1<------ZmHOX2a(2)      <---------STY1(2)   tacgagtataatagttacgagaaatctcatcaccaaattcaaaactccacggctcaaactagatctaccttctctacaacattctagccagttgaatgca  16611300                    ----------->GT1                    --------->YAB1                   ----------->GT1                   <---------YAB1                 --------->YAB1               <---------AHL20(2)  <----------DOF2         ------>ZmHOX2a(2) <---------------AtSPL8                          ------>MYB46(1)     --------->KAN4(1)     <---------ICU4                    --------->ATHB12--------->ZAT6     <---------KAN4(1)     <---------------AtSPL3           <---------YAB1 ------>MYB83    <---------KAN4(2) <---------YAB1              <---------ANAC46       <---------MYB46(2)   --------->YAB1<---------ICU4 --------->ANAC58  <---------ANAC58       <---------MYB59 ------->YAB1<---------ATHB12  <---------ZAT18    <---------ANAC58       <---------MYB111(1)     <--- -------ATHB12--------->YAB1   --------->ZAT18 --------->RVE1(1)     ------>ZmHOX2a(2)      <-------- ---->WOX13(1)--------->AHL20(2)--------->ANAC58--------->ARR11(3) --------->ARR14(2) <------NtERF2   atcaagaatgatccaataaaaatgataaataagtacgcttcaaggagaaatatcgtggtttcatgtttggatcgacctaactctaggccgaatcaaatct  16611400                                                                     --------->At4g35610                      --------->AHL20(2)                             <---------At4g35610                      <---------AHL20(2)                 --------->AHL20(2)                     --------->AHL20(2)                 <---------ATHB12               <---------YAB1                         --------->WOX13(1)                         <--- ------LBD16<---------MYB52(1)               --------->GLK1(2)      ------->TEIL              <------ -CCA1(2)  <-------GAMYB     ------>ZmHOX2a(1) --------->YAB1 --------->MYB111(1)           ---------   ctgggtatgatgctgttatgaaattttattcctctataaacgagaagaatcaagaccaattaagtagttgcatctccagcgattgttttatcgatgattt  16611500                                                 ------>ZmHOX2a(2)                                                <---------GLK1(1)                                                <------ZmHOX2a(2)                                               <---------ARR11(3)                                               <---------AGP1                                         --------->HSFB2a(2)                                         <---------HSFB2a(2)                                  <---------RVE1(1)                                  <---------CCA1(1)                                 --------->ARR11(3)    --------->LBD16      ---------->DOF2            <---------GLK1(2)    --------->ANAC46 <----------DOF2               ----------->ARR10--------->GLK1(1) --------GT1     <---------LBD16 <---------ARR11(3)  <---------LBD16           <---------ANAC46 ---GLK1(1) <----------DOF2--------->ANAC58    <-----------ARR10--------->AHL20(2)          <-------- >ATHB12   <---------DAG2  --------->ANAC58    --------->ARR11(3)            <---------ANAC46   ctcctttccaaagccttttcgagggaaacaagtaagattttttctataagatctctccgcaaacttttaaatctatacgatgtgtatacatattatacat  16611600                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                                 <---------GLK1(1)                        <---------TOE2(3)   <---------ARR11(3)                   --------->ANAC58                               <---------MYB52(1)   --------->ARR14(2)                   --------->ANAC58                     <----------ID1    <-----   <---------ARR14(2)                 <------ZmHOX2a(1)     <---------ARR11(3)        --------->TOE1(3) ---GT1    <---------ANAC46        <---------AtLEC2         --------->ARR11(3)        --------->TOE2(3)   ttcaagatttgttttgtgaatgaattgacatatttttgcaggaagctatggagttcttcgaagaacttgtgaagagtatgggacaaaacgttaagttttg  16611700  Previous    Next  AGI:  At5g41470.1    Description:  similar to nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana] (TAIR:AT1G71480.1); similar to hypothetical protein OsI_013923 [Oryza sativa (indica cultivar-group)] (GB:EAY92690.1); contains domain NTF2-like (SSF54427) Range:  from: 16611181    to: 16612796    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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