Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <------NtERF2                                                               ------>NtERF2     --------->ALFIN1                                                              --------->LBD16   ------->MYC3                  <---------ARR11(1)                         <---------DEAR3(1) ------->MYC2                  --------->ARR11(3)                        ------>NtERF2       ------->MYC4                  <---------ARR14(2)                       --------->O2         <-------MYC3                  <---------ARR11(3)                       --------->TGA1a      <-------MYC2                 ------>MYB83                              =========================bZIP_DOF         --------------->AtSPL8                            <---------TGA1a      <-------PIF5        <---------ANAC46                                   <---------O2         <-------MYC4      <------MYB46(1)                                      <---------bZIP60(2)  ------->PIF5      <------MYB83--------->ARR14(2)                      --------->ATERF1(1)  <---------ANAC55(2)     <---------AtMYB61                                    <------NtERF2        --------->ANAC55(2)     --------->MYB59    --------------->AtSPL8           ------>NtERF2         <---------TGA1a <------MYB46(1) <---------CCA1(2)                       <---------RAP2.6(3)   --------->TGA1a <------MYB83    <---------ARR14(1) <-----------GT1     --------->DEAR3(1)     <---------O2         - -->ANAC58       ------>MYB46(1)<----------DOF2         ----------->HVH21---------->DOF2          <-- -->ANAC46     <---------MYB59  =====================================bZIP_DOF  --------->O2  <------- -->ANAC58  <-----------GT1 ------->TEIL               --------->DEAR3(2)================bZIP_DOF<---   atttggtttggtttgtaccaaatcttgatgtactcttttctctgtttccatagtcttgccgacgcggcgataccgaaaaccacgtgttggaaaccggttt  16609100              <---------MYB46(3)             <---------AtMYB61             --------->ALFIN1          <---------DEAR3(1)          --------->ALFIN1          <---------AtMYB61        <---------ZAT2       <---------DEAR3(1)       <---------AtMYB61       --------->ALFIN1      <------NtERF2    <---------DEAR3(1)    <---------ANAC58           --------->ALFIN1    <---------ANAC46        <---------DEAR3(1)    <---------ANAC58        --------->ALFIN1   <---------LBD16          <---------AtMYB61   <------NtERF2--------->ALFIN1   --------->ATERF1(1)   <---------AtMYB61  ------>NtERF2 <---------AtMYB61  <---------MYB46(3)  <---------REM1(1) --------->ALFIN1<---------MYB46(3)         --------->ATHB12 ----------->HVH21  <---------MYB46(3)     <---------YAB1 <---------AtMYB61 <---------AtMYB61    <---------SPL7                                             -- <---------DEAR3(1)<---------ANAC46    <---------ANAC58              <---------ANAC58       <-------- -------->ATERF1(1)--------->ALFIN1    <---------ANAC46              <---------ANAC58       --------- -------DEAR3(1)<---------DEAR3(1)     <---------ANAC58              <---------ANAC46 <---------MYB46(3) --MYB52(1)<---------MYB46(3)<---------MYB46(3)                --------->ATHB12    --------->MYB52(1) ------LBD16 <---------DEAR3(1)<---------ANAC46             <---------MYB52(1)  --------->GLK1(2)----   gcggtggcggaggtggtggtggtggtgaaggtggtggagaggcgtatgatttgattacagccgtttgatttgtgtggaagagaatcaacggttgagatga  16609200                                                        ------->PIF5                                                        <-------MYC4                                                        ------->MYC2                                                        ------->MYC4                                                        <-------PIF5                                                        <-------MYC3                                                        <-------MYC2                                                        <-------PIF4                                                        ------->PIF4                                                       <---------ANAC55(2)                                                       --------->TGA1a                                                       --------->ANAC55(2)                                                       --------->ANAC58                                                       <---------O2                                                       <---------TGA1a                                                       --------->O2                                 -                               <------NtERF2           =============================bZIP_DOF        <                             <---------DEAR3(1)        --------->ANAC58                           <--                             <---------ANAC46        <------------OsbHLH66                        <--         <-------GAMYB      <---------LBD16        --------->ANAC58              --------->REM1(2)<--        <---------ANAC46   ------->GAMYB           --------->ANAC58             --------->ALFIN1 <--- --------->HVH21           ======================================MYC_MYB      <---------ANAC46 ------ -At4g35610             --------->MYB52(1)  --------->O2------->MYC3     <----------DOF2     -------- >At4g35610            --------->MYB46(3) <---------ALFIN1          --------->CCA1(2)     --------->TOE2(3) ----->At4g35610<----------ID1--------->LBD16 ----------->HVH21  <---------TOE2(3) <---------ETT(2)--   gttgacaatgtcgttgagacgacgaacaacggcggagaatggctccacttgacaagcacgtgagtttgagataagctttagtgtgtagacaacgtaagtg  16609300                                                   <---------ZAT14                                                   --------->ZAT14                                                  ----------->HVH21                                                <------MYB46(1)                                                <------MYB83                                                <---------DEAR3(2)                                               <---------DEAR3(1)                                               --------->MYB55(2)                                               <---------DEAR4(1)                                   -         --------->ALFIN1                      --------->MYB46(2)                                 ---        <------ZmHOX2a(1)                      <---------MYB46(3)                                 <--      --------->ALFIN1                        <--------P                                          <-- <---------ARR14(2)                          <-----------HVH21                                    <-- --------->ARR14(2)                        <---------DEAR3(2)      --------->DAG2            -------- -------->ATERF1(1)                        <---------MYB46(3) --------->LBD16                -------- ------NtERF2                             --------->ETT(1)  <---------LBD16                  <------- -------ANAC46         --------->YAB1<---------ANAC55(2)    ------>ZmHOX2a(2)                -------- -------ANAC58        <---------YAB1 --------->ANAC55(2)   <------ZmHOX2a(2)  <---------ALFIN1    --- -------ANAC58     --------->DOF5.7(2)  <-----------HVH21 --------->ARR14(2)  ----------->RAV1(1)<--- ------LBD16      <-------GAMYB    --------->CCA1(2)      <---------ARR14(2)  ======================= --->ALFIN1 --------->ALFIN1      --------->ARR14(2)    --------->LBD16 <---------ANAC58     <------- ->MYB52(2)<------ZmHOX2a(1)      --------->ARR11(1)  <---------LBD16   <---------ANAC58    <-------- ------->LBD16<------ZmHOX2a(1)   <---------ARR14(2) ------->TEIL ---------->DOF2     <---------GLK1(2)   gcggagacgaggaggaggagcgttaccataagtttggatacgggtcgggtcggtgaaccggatccggataaagtccgttcccacattagcttctctgctg  16609400                                                                                        <---------ICU4                                                                                        <---------AHL20(2) <----------DOF2                                                                       --------->ICU4 ----->ZmHOX2a(2)                                                                      --------->AHL20(2) ------>ARR11(3)                                                                  ----------->GT1 -------ARR14(2)                                                                <---------WOX13(1) -------ARR11(3)                                                              -------->HAHB4 -------AGP1                                                                  --------->ATHB51 --->RAV1(2)                                                                  <---------ICU4 ->ZAT2                                                                       <--------ATHB1 --At4g35610                                                                 --------->AHL20(2) ->At4g35610                                                 --------->GLK1(2)--------->ATHB12 ------>ARR14(2)                ---------->DOF2          --------->YAB1      <---------AHL20(2) ------CCA1(2)     --------->REM1(1)               --------->ANAC58          <---------ATHB51 ====RAV          <-------TEIL --------->TOE1(2)   --------->ANAC58      <---------AHL20(2)<---------ICU4 --ZAT2        <---------At4g35610         ---------->DOF2   <---------ARR11(3)<------------CBF ---RAV1(1)    --------->At4g35610  ------------------------>ANAC81  *TSS--------->AHL20(2)<---------AHL20(2)   gatctttctggttattcagcttcatcttaagaaccaaagatgaagaaaaggaaacgaaatcaaaatctaagaaatataaataattggtaataaatatttc  16609500                                                                             ---------->DOF2                                                                           --------->HSFB2a(2)  <----                                                               <---------ZAT14                  <----                           ---------->DOF2              --------->ALFIN1   <---------HSFB2a(2)  <----           <---------AHL20(2)               >>>>>>>>>TBF1      --------->ZAT14           ---------->DOF2          --------->AHL20(2)       <------------CBF--------->AtLEC2<---------YAB1   <----------ID1   gatggaaacaaattttatgggtttaagaagaaagtgagattgagaagaagaacatgcagtggctctgttctgattttctaaaagagaagacaaaagtgtc  16609600                                         <---------AHL20(2)                                         --------->AHL20(2)                                    <---------AHL20(1)                                    <---------AHL20(2)                                    --------->AHL20(1)                                    --------->ARR11(3)                                    --------->AHL20(2)                                    <---------ARR11(3)                                 <---------AHL20(2)                                 --------->AHL20(2)                               <---------AHL20(2)                                      --------->ARR11(3)  ---------->DOF2           --------->AHL20(1)                         <----------DOF2 <-----------ARR10 -----ANAC58                <---------AHL20(1)                    --------->YAB1       --------->GLK1(2) -----ANAC58             --------->AHL20(2)                ----------->GT1             <---------ARR11(3) -----ANAC46    <-----------GT1--------->AHL20(2)        ---------->DOF2              --------->RVE1(1)   ttgtgaaagagactcattttacttagtttatatattaatatattaaaatgtcatagtcaaaaagaaaattatacttttagttagcaaaaaatctaatcta  16609700                       <---------GLK1(2)                     ----------->ARR10                <---------TOE1(3)                         <-----------GT1                        ----                <---------TOE2(3) <-----------GT1------>ZmHOX2a(2)                             ------              ---------->DOF2  <---------ICU4  <---------ARR11(3)                            <-------           --------->YAB1  <---------YAB1      --------->ARR11(3)       <---------ZAT6   --------->TOE2(3)          <---------YAB1--------->GLK1(2)   <---------WOX13(1)          ----------->GT1 ----------->GT1   ttttgtttcgatatgataaaggttagattctaattgttactcttagattgatcttggaattatctgtatgagtagagtaattaacaaaaaacgttatacg  16609800                                                  <---------AHL20(2)                      <----------ID1                                         <---------ANAC46                          --------->ANAC58                                         <---------ANAC58                          --------->ANAC46       --------->ICU4                    <---------ANAC58                          --------->ANAC58    ---------->ID1                    ------>ZmHOX2a(1)                          --------->ZAT6 ----->ARR11(3)                   --------->ARR14(2)                  <---------At5g28300--------->MYB46(3) --->ANAC46       --------->YAB1  <---------ARR14(2)                 <-----------GT1     --------->DEAR3(2) ----GT1         <---------YAB1   --------->ARR11(3)         ---------->ID1    <-----------GT1   ----   atatttgtcatatttagctctgataaacaattgatatatcctcgcgtttgattttttttttttgttgtcatttactgtattttacactcaaaccgacaaa  16609900                                                           --------->ANAC58                                                           --------->ANAC58                                                <------MYB83                                                <---------ANAC46                                                <------MYB46(1)                                               --------->MYB111(1)                       <---------ANAC58        --------->MYB59                                      <                       <---------ANAC58   --------->AHL20(2)                                      <--              --------->YAB1              --------->AHL20(1)                                      ---              --------->AHL20(2)          <---------AHL20(2)             <-----------GT1       <-----             <---------ATHB12        <---------TOE2(3)<----------ARF1   <---------YAB1   ---------->ID1         --------->WRKY18(1)     --------->CCA1(2)--------->ALFIN1    <---------ICU4    <-----------GT1 ----->YAB1--------->WOX13(1)<------ZmHOX2a(1) --------->MYB46(2)     --------->YAB1  <---------AHL20(2)   caaaatatacagtcaatcaaattttgcttaaggagatttaagaattaattaggtgggaaacaagaaatacaattataactactagtattttttcgtttta  16610000  Previous    Next  AGI:  At5g41460.1    Description:  fringe-related protein. similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT4G23490.1); similar to transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G11350.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65925.1); similar to unknown [Populus trichocarpa] (GB:ABK95538.1); contains InterPro domain Protein of unknown function DUF604 (InterPro:IPR006740) Range:  from: 16606826    to: 16609469    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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