Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------At4g35610         --------->TGA2(2)        <-----------TGA1        <-----------HVH21       --------->ANAC58       --------->O2       =====================================MYC_MYB                                      <-----------STF1       --------->ANAC58                                                                 ------>ZmHOX2a(2)       <---------TGA1a                                                                 --------->GLK1(1)       <---------O2                                                                    <------ZmHOX2a(2)       --------->bZIP60(2)                                                             <---------GLK1(1)       --------->ANAC55(1)                                                            <---------AGP1       --------->ANAC55(2)                                                            <---------ARR14(2)       --------->ANAC46                                                               <-----------ARR10       <---------ANAC55(2)                                                            --------->ARR11(3)       --------->TGA1a                                                                --------->ARR14(2)      <-----------STF1                         <---------ARR14(2)                    <---------CCA1(2)      <-----------bZIP911(2)                   --------->ARR14(2)                   <---------DEAR3(2)      <-----------bZIP910(1)                  <---------ZAT2                      <------NtERF2  --------->ZAT18          <---------ATHB12   <---------At4g35610                <-----------HVH21  <---------ZAT18    <-----------GT1          --------->ZAT2                    --------->DEAR3(1) ------>DOF2--------->At4g35610               --------->At4g35610             <---------At4g35610 ---------------->TaNAC69(2)        ------->GAMYB  ----------->GT1            --------->At4g35610 -->HSFB2a(2)     --------->YAB1 --------->MYB52(1)--------->LBD16        <-----------HVH21 ---HSFB2a(2)    <---------YAB1--------->MYB46(3)<---------LBD16          <-----------TGA1 <---------   aaagtggacacgtcatctgattataacccatcatccaacggtctaaacagctccggtgaaatatgtgttgacaattcgtcagccgtcggatctcgtcatc  16587000                                                                                <---------ANAC46                                                   --------->LBD16              <---------ANAC58                                               --------->ARR14(2)      --------->ARR14(2)                                               <---------ARR14(2)      --------->GLK1(2)                                               --------->GLK1(2)       <---------ARR14(2)                                           ------>ZmHOX2a(2)           <-----------ARR10         ----                                          <------ZmHOX2a(2)           <---------GLK1(2)          <---                                     <---------LBD16               --------->HSFB2a(2)      <--------                                   --------->ARR14(2)              --------->LBD16       <---------GLK1(1)                        --------->LBD16  --------->ARR14(2)   --------->At4g35610        --------->GLK1(1)                  <---------ALFIN1 <---------ARR14(2)         <---------At4g35610       <---------ARR11(3) --------->HSFB2a(2)   --------->ANAC46  <---------ARR14(2)   <---------ZAT2    <---------ANAC58 <--- <---------HSFB2a(2)  <---------LBD16------>ZmHOX2a(2)       --------->MYB59   <--------------------- --------->HSFC1(1)  --------->DEAR3(1)--------->LBD16     <<<<<<<<<AtLHY    ----------->HVH21   ---- <---------HSFC1(1) --------->ANAC46<------ZmHOX2a(2)      <<<<<<<<<AtCCA1 --------->At4g35610   ---- --TGA1        <------NtERF2  --------->MYB52(1) <---------LBD16   <---------HSFB2a(2)  --------->ARR11(3)   gttctcgaactcgtggaggcacaccgcgcagcaatcggatccggatccgaatccgggtcgagttagctccgagaatctgatgacgggcaagatttctcca  16587100                                                      --------->LBD16                                                     --------->DEAR3(1)          <------NtERF2                              <---------ANAC46         <---------ATERF1(1)                        --------->ATERF1(1)         --------->ABI4(1)                          <------NtERF2         ------>NtERF2                             --------->ABI4(1)        --------->DREB2C(2)                        ------>NtERF2        --------->RRTF1(2)                        --------->RAP2.3(2)        --------->RRTF1(3)                        --------->RRTF1(2)        --------->RAP2.6(2)                       --------->DEAR3(1)        --------->RAP2.3(3)                       <---------DEAR3(1)        --------->RAP2.3(2)                      --------->DEAR3(2)        --------->DEAR3(1)                       <------NtERF2        --------->ANAC46                         --------->RAP2.3(1)        --------->ATERF1(2)                      --------->DEAR4(2)        <---------ATERF1(2)                      --------->RRTF1(1)       --------->RAP2.3(1)                       --------->ATERF1(1)      <---------ATERF1(1)                        --------->RAP2.6(1)       --------->ANAC46     <---------DEAR3(1)                          --------->ERF1        <---------ARR14(2) ----->STY1(2)                                   --------->ORA47(2)  --------->ABI4(2) ------At4g35610                          <---------YAB1      --------->ARR14(2)----------->HVH21 ---GT1--------->ERF1                     --------->ICU4      <---------ARR14(2)----------->TGA1 ------ZAT2                       <---------ANAC58--------->RAP2.3(3)<---------MYB46(3) --TaNAC69(2)                  <----------DOF2  <---------RAP2.3(1)  --------->MYB55(2)            -- ----->ZAT2<---------ALFIN1  --------->At4g35610<---------ATERF1(1)<---------MYB52(1)            <--- ----->At4g35610   ----------->GT1<---------ANAC58--------->RRTF1(3)--------->ALFIN1  ----------->TGA1   gctagcctcgccgccactgggaagaaaaatgagctttcttggtgatgatgcgccgccgtggacatatacggtggttccagccatgacgatgacgatgaaa  16587200                                                                                                -----          <---------HSFC1(1)                                                                   <-----          --------->HSFB2a(2)               --------->LBD16                                    ------          <---------HSFB2a(2)              <---------ANAC55(2)                                 <-----      --------->ARR14(2)              ---------->DOF2                                          ------      <---------ARR14(2)        <---------ARR14(2)                                             <-----      <---------GLK1(2)   --------->ANAC46 --------->ANAC55(2)                                -------   --------->ETT(1)   <--------P<---------ARR11(3)                                            <------ <-----------HVH21  <---------ANAC46--------->LBD16                                           <------ ------->LBD16    <---------ANAC46 --------->ANAC46    <---------ZAT6                         ------- ------LBD16 ---------->DOF2    --------->ARR14(2) <---------YAB1                            --------   ccgggtcggattcgagaaagtcgggtagacccaatatccgaaaacccgtgtctatgagtgttcgtattaagcctaagagagagagtaagtgaaggaagat  16587300                     --------->ANAC46           <---------GLK1(1)           --------->ZAT2--------->MYB52(1)           --------->At4g35610         <------ZmHOX2a(1)<---------LBD16       --------->ALFIN1  ------>NtERF2      <------ZmHOX2a(1) <---------ALFIN1 ---->GLK1(2)        --------->ANAC58 ----GLK1(2)         --------->ANAC58 --->ARR14(2)       --------->SPL7 ----ARR14(2)       ------->TEIL --->ARR11(3)     <---------ZAT14 ----ARR11(3)     --------->ZAT14                    ---------->DOF2 -->HSFB2a(1)     <---------ZAT18                 --------------->AGL15                       ------- ---HSFB2a(1)   --------------->AtSPL8   <---------ANAC58                                  <------ZmHOX2a(1) ---HSFC1(2)   <---------ANAC46          <---------ANAC58  ---------->DOF2              --------->SPL7 -->HSFC1(2) <---------ZAT14--------->LBD16--------->ATERF1(1)                       --------->ANAC58 --->ARR10 <---------At4g35610 --------->GLK1(1)------>NtERF2    ---------->DOF2     --------->ANAC58   tcttgggaggaggagctcagtgtaccccaccggataacccatggcttcgccgctagaaagagaaagctaaagagatagagagagagcgcgtaaggagttg  16587400                                                                                         <---------YAB1                                                                         <---------AHL20(1)                                                                         --------->AHL20(2)                                                                         --------->AHL20(1)                                                                   --------->YAB1  --------->ICU4                                                                   <---------ANAC55(2)<---------YAB1-                                                          ------->TEIL   <---------AHL20(2)        <-                  --------->CCA1(2)                       <-------TEIL<---------ICU4<---------ICU4---                <------NtERF2                         <---------------AtSPL8  ----------->GT1  <-----     *TSS---------->DOF2       <-----------TBP        --------------->AtSPL8--------->ICU4  <-------- -->ALFIN1 --------->DAG2  <------ZmHOX2a(1)        ------->TEIL   --------->ANAC55(2)<---------AHL20(2)   ggaacgagagaaaaaggcagagatgagtaggatatatatactcagtgatatatgaatatgtacatacttacataattaattagtaaatattattatgctt  16587500                                                                          ------>MYB83                                                                          ------>MYB46(1)                                                                        --------->AtMYB61                                                                        <---------MYB46(2)                                                                        <---------MYB111(2)                                                                       --------->ANAC58                                                             <---------DOF5.7(2)                                                           --------->DOF5.7(2)       <---------AHL20(2)                                  <---------MYB52(1)   <---------AHL20(2)                                     --------->TOE2(3)   --------->YAB1                                         --------->TOE1(3)   --------->AHL20(2)                                 <----------DOF2  --------->ANAC58 -------->YAB1                                  <---------ANAC58--------->TOE2(3) --------AHL20(2)                               <---------ANAC55(2)    --------->ANAC46 ------>AHL20(2) <---------ATHB12               --------->ANAC55(2)  --------->ANAC46 -----DOF2       <---------ATHB51               <---------ANAC58--------->TOE1(3)   --------->ZAT14 -YAB1 --------->AHL20(2)     --------->LBD16  --------->MYB52(2)<-----------HVH21  <---------ZAT14   tttaataatataaatacaaataatgcaaaacccgtgtgtatcacttggttacttgactttcgttaaccttcacaccaaacttactctgcagtaagtttaa  16587600                                                                                    --------->ATHB12                                                                                    -------->ATHB1                                                                                    --------->ATHB51                           <-----------GT1                                         <---------YAB1              --------->ICU4      --------->AHL20(2)    <----------DOF2          <---------ZAT6 -----   tctaactattgaagtaatttttgttaatataacaaaatatatgttttgaaactttggacttttaaaaaatgttttaaaatttagtattattgaactagtg  16587700                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                  <---------YAB1                                                --------->AHL20(2)                                                <---------AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                                      ---------                 <---------ARR11(3) --------->ARR11(3)                           <---------HSFB2a(1)     --------->DAG2       --------->ATHB12     <---------AHL20(2)                --------->HSFB2a(1)    ---------->DOF2      <---------YAB1      <---------ICU4                     <---------KAN4(2) ---->ATHB12     --------->ARR11(3) <---------ARR11(3)              <---------GLK1(2)       ---------   atttgaaaaagtattctaaaatctattgttattggaaatatttttaaaaattatttttttagcgatttcagaatattaagagaattttcttagtaagaaa  16587800                                                               <-----------GT1                                                            --------->YAB1                                                            <---------ICU4                          <                                                           <---------YAB1                           -                                                         --------->YAB1                           ---                                                         <---------ICU4                           <--                                                        <<<<<<<<<ARR2                           -----                <---------TOE1(3)                       <---------ATHB12                       <-----       <---------AHL20(2)                               <<<<<<<<<ARR1                          ------       --------->AHL20(2)                          --------->YAB1      ------>ZmHOX2a(1)   <---------AHL20(2)   --------->AHL20(2) <---------AHL20(2)           <-----------GT1    --------->TOE2(3)   --------->AHL20(2) >ANAC58  --------->ARR11(3)                   <---------AHL20(2) <----------DOF2      <---------AHL20(2) >ANAC58  <---------ARR11(3)         --------->ALFIN1 --------->WOX13(1)               --------->AHL20(2)   cacaaaaatataaatcttatggttttaaatgggattgagggggagggattttataacaatcataataactttcctaaattcacttaaaattatataatat  16587900  Previous    Next  AGI:  At5g41400.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G63840.1); similar to At1g63840-like protein [Arabidopsis lyrata] (GB:AAZ73388.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16586605    to: 16587405    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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