Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->AHL20(2)                                        --------->ZAT18                                        --------->ZAT14                                        <---------ZAT18                                        <---------ZAT14       <-----------GT1           --------->ARR11(3)                <---------DAG2 --------->GT1                   --------->AHL20(1)                <----------DOF2                  - -----MYB52(1)   <----------DOF2 <---------AHL20(1)             <-----------GT1                    <- --HVH21<-------TEIL            --------->AHL20(2)  --------->MYB52(1)                           ----   tttgttaatatacattatacttttaaacatagaaatatatagtgcacaaaaaaataagggactatattacttttcaaatgcaatagtatacaatgctatt  16520600                                                                                        <---------GLK1(2)                     <---------AHL20(2)                                               <---------AHL20(1)                    <---------AHL20(1)                                                <---------AHL20(2)                  <---------ARR11(3)                                                  --------->ARR11(3)       ------->TEIL --------->AHL20(1)   <---------AHL20(2)                           --------->AHL20(1) -------->YAB1    <---------AHL20(1)     --------->ATHB12                             --------->AHL20(2) --------YAB1     --------->AHL20(1) --------->REM1(1)                                <---------ARR11(3) ----->YAB1  <---------ATHB12       <-------TEIL     <---------AtLEC2         ---------->DOF2   tatgatatgtatgccatcaatatatattttagtctagctacatttattgaaatttgcataacttatgtgctacagtacttgaaagaaatatattctcaga  16520700             <---------ARR11(3)                                                                   <--    <---------AHL20(1)                                 <---------AHL20(2)                      <-----    --------->ARR11(3)                                --------->AHL20(2)--------->ARR14(2)   -------- <---------AHL20(2)                                   <---------AHL20(1)--------->ICU4<----------DOF2 --------->AHL20(2)                                   <---------AHL20(2)<---------ARR14(2)   <-------   aaattatatattcaacatattcagttttataaacttgtgagtaattccaaaactaattaattttgctattagcaaatatgagttgtttctttagaatttt  16520800                           --------->ARR14(2)                              <----------DOF2                      <---------ANAC46                              <------ZmHOX2a(2)                   --------->WRKY12                                --------->ARR11(3)        <---------ALFIN1   <---------ARR14(2)                      <---------ARR11(3) --------DOF2      --------->WRKY38(1)                         ---------->DOF2 ------GT1       --------->At4g35610                        <---------AHL20(2) ->HSFB2a(1)     <---------At4g35610                        --------->AHL20(2) --HSFB2a(1)    <---------ANAC46    <----------DOF2      ----------->GT1   <---------DAG2      ------   cttttttgacacactgttgagttgacttggatactctgctttgctgtgttcattttggatattaaaaaagatcagaactttattttgttaacaaaaaaaa  16520900                                      ---------->DOF2                                     <---------REM1(1)                             <---------HSFB2a(2)                                                <----                             --------->HSFB2a(2)                                                -----                     <---------AHL20(2)                         <---------GLK1(1)        <---------DAG2                     --------->AHL20(2)  <---------At4g35610    --------->GLK1(1)        <----------DOF2                 ----------->GT1---------->DOF2  --------->At4g35610  <----------DOF2<---------TOE2(3) ---->DOF2   ---------->DOF2 --------->LBD16  ---------->DOF2   --------->ARR14(2)  <-----------GT1 -   agaagaattatctggcaaagtgtttaatttccgagaaagttgaagcagagaagcagaaagtttcagaattctcttttctccaagtttaacgcttttttag  16521000              --------->ANAC46              --------->ANAC58              --------->ANAC58            --------->ANAC46   <---------At4g35610   --------->At4g35610          <----------DOF2                         --------->ETT(2)  *TSS    <---------ALFIN1   ------>ZmHOX2a(1)                    <----------DOF2 -----At4g35610   <---------ALFIN1     <----------DOF2          ------>ZmHOX2a(1)  --------->HSFB2a(2) ---->At4g35610   --------->AtMYB61   --------->TOE2(3)     --------->ARR14(2)    <-----------GT1 --------->DOF2  --------->MYB46(3)<-----------GT1          <---------ARR14(2) <---------CCA1(2)    <   ctcaaagctcacacacacgaccactctattcctcctttaacctttgtgtttgtcaatttgtgtttcctcttttgtcgactcatttctcgattcaatctcg  16521100                                                                                             <-------                                                                                             <-------                                 ------->TEIL                                               <--------                       <---------GLK1(1)                                              <---------TOE1(3)                       --------->GLK1(1)                   <---------TOE2(3)          <---------TOE2(3)             --------------->AGL15 <----------DOF2         <---------TOE1(3)          --------->MYB59             <---------------AGL15 <---------DAG2         ---------->DOF2        <---------MYB46(3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 ------>ZmHOX2a(2)      --------->ARR11(3) ---------AHL20(2) <---------TOE2(3)       <---------TOE2(3)                <---------ARR11(3)   attttttttttttttttttttatggaaatctaatgaactttttttatggatttgatctgttaaagtttcgattaagaagatagtggtttaggtttacggt  16521200                                                                                  --------->ARR14(2)         <---------AHL20(2)                                                       <---------ARR14(2)         --------->AHL20(2)                         <----------DOF2           ===============HOX2a_HOX2a        <---------WOX13(1)                      --------->ZAT18               <------ZmHOX2a(2)      --------->ATHB12                          <---------ZAT18              --------->ARR11(3)    <---------WOX13(1)                ---------->DOF2                        <---------ARR11(3) <---------YAB1                 ----------->GT1 <---------ZAT14        --------->HSFB2a(2) --TOE1(3)                 <---------MYB46(3)   --------->ZAT14        <---------HSFB2a(2) --TOE2(3)               <---------ANAC58    <---------At4g35610    --------->GLK1(2)       <-------- -At5g28300              <---------ANAC58    --------->At4g35610   <---------GLK1(2)  ------>ZmHOX2a(1)   tttgtaattgatttattatctgtaatgggttgtgaggtttcaaagttatctgcactttgttgtgtttcagagtctggaagatcgaatcctgatgttacag  16521300                                                               --------->YAB1                                                          <----------DOF2                                                         ------>ZmHOX2a(2)                                                        <---------RVE1(1)                                                        <------ZmHOX2a(2)                                                       --------->AGP1                                                  <---------WOX13(1)                                                --------->ATHB12       <---------LBD16    <--------P <---------MYB46(3)              --------->ICU4  --------->TOE2(3)                   -- <---------TOE2(3)                   <---------TOE1(3) <---------ARR11(3)                 <------ZmHOX2a(1) --------->MYB59 <---------MYB52(1)  <---------TOE2(3) --------->ARR11(3)           --------->At4g35610 ---GT1   ---------->DOF2   --------->ARR11(3) <---------YAB1 <---------YAB1        <---------At4g35610   gcttaggtaagttatagccgttgatgagtttatcttgttagggtttttgatgattgagatctttatgttaatttctgggtttattcagatgaggaaggga  16521400                                                                                 --------->GLK1(2)                                                                    --------->GLK1(1)                                                                   <---------ARR14(2)                                                       --------->ANAC46   --------->ZAT2                          <---------ANAC55(2)          --------->ANAC58   <---------At4g35610                          <---------ANAC58             --------->ANAC58   --------->At4g35610                          <---------ANAC46          <------ZmHOX2a(1)     <---------ZAT2           --------->ATHB12 <---------MYB52(1)    <---------------AtSPL8 ----------->RAV1(1)          <---------ATHB12<---------ANAC58        --------->ANAC46<------ZmHOX2a(1) --------->GT1    --------->TOE2(3)               <---------TOE2(3)--------->ARR14(2)   gaggtgaatcgaatgatttgcctcaatttcgtgagttctctatagagactataaggaacgcaacttcaggatttgcagcagagaatatagtttcagagca  16521500  Previous    Next  AGI:  At5g41260.1    Description:  protein kinase family protein. similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G63500.1); similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G59010.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21539.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39581.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62818.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain P Range:  from: 16521002    to: 16524703    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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