Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------TOE1(2) ------>ZmHOX2a(2)                                                           ------>ZmHOX2a(1)<---------ARR11(3)                                                  --------->ATHB12          --------->ARR11(3)                                                 <---------TOE2(3)        <---------YAB1     --------->ATHB51                       <---------At4g35610         <---------ICU4     -------->ATHB1                         --------->At4g35610         --------->YAB1 <---------ICU4     --------->ATHB12                   <----------DOF2    ==========================HOX2a_HOX2a<----    <---------YAB1                  <---------GLK1(2) <------MYB83     <---------YAB1 <---------YAB1   <----------DOF2               <---------WOX13(1)   <------MYB46(1) --------->ARR11(3) <---------YAB1 <---------ZAT18               --------->ATHB12  <---------YAB1      --------->YAB1 --------->YAB1   ctgtgcattattgaagcttatgtactatgttcttcattgattctttagcttaagattggtcctagtttatatgatcatgatctgtttcatcatttttgtt  16469400                                             --------->GLK1(2)                                           <---------ATHB12                                     --------->At4g35610                 <---------ZAT18     <---------At4g35610                        <-----------RAV1(1)                 --------->ZAT18     --------->ZAT2                           <---------GLK1(1)              <---------ANAC46       <---------ZAT2                          --------->ARR14(2)  --------->HSFB2a(2)               ------->TEIL --------->At4g35610         <---------ARR14(2)  <---------HSFB2a(2)            <---------REM1(1)   <---------STY1(2) --------->ALFIN1 -------GT1<-----------RAV1(1)<---------ZAT6--------->YAB1             <-----------RAV1(1)   <<<<<<<<   acttctacaaattttgttgtggacttgtagtagtgatgcagctcaataatctgctagctaagttttttggaatgtgttggatatgttgttgattcttctt  16469500                                              ------>ZmHOX2a(1)                            --------->At4g35610                          <-----------HVH21                            --------->ZAT2   --------->TOE1(3)      <---------GLK1(1)                            <---------At4g35610 ----------->RAV1(1) --------->GLK1(1)          <-----                  <------ZmHOX2a(1)          --------->ANAC46    --------->LBD16--------->AHL20(2)                 <---------At4g35610         --------->TOE2(3)  <---------HSFB2a(2)  <---------AHL20(2)               <-----------RAV1(2)        --------->ARR14(2)    --------->HSFB2a(2) --------->AHL20(2) <TBF1         <---------LBD16        <-----------GT1   <-----------RAV1(1)  <---------ANAC55(2)   <-   ctccatttttgttcatttcaggagactatcagctctgttttctctatcctcaacatatatgttgctccagaaatcggtcacataaattttatgtctcatc  16469600                                            <---------YAB1                                 <---------ANAC46                                <---------ZAT6   <---------TOE2(3)             <---------ANAC58                  <------ZmHOX2a(2) ----CCA1(2)                     <---------ANAC58                 <---------ARR11(3) ---------DOF2              <---------MYB46(3)        <----------DOF2         --------->ATHB12     --   tctttaatgtggacatcaatggatgaactgtggatgcctgtaacttatgcttagttctttattatctagatcaaattgattcagtggtaatccgtcttct  16469700                   --------->ATHB12                   <---------MYB46(3)            --------->ANAC55(2)            <------MYB46(1)            <------MYB83           --------->MYB111(1)           --------->MYB111(2)           --------->MYB46(2)                                                         --------->AHL20(2)           --------->MYB59                                                            <---------AHL20(2)          <--------P                                                        --------->ANAC46          <---------MYB55(1)                                                --------->ANAC58        <------MYB83 <--------P                                             --------->ANAC58        <------MYB46(1)                                                ----------->HVH21       --------->MYB111(1)       ------->TEIL                          --------->ZAT18<---------YAB1       --------->MYB59          <---------CCA1(2)                    --------->At4g35610    --------->ARR14(2) <------MYB46(1)                               <---------At4g35610    <---------ARR14(2) <------MYB83                           <----------DOF2   <------NtERF2   <------ZmHOX2a(1)<---------ANAC46                       --------->ARR11(3)   <---------At4g35610 -------->DOF2   <---------WOX13(1)     <---------GLK1(2)  <---------ARR11(3)   --------->At4g35610   tgaaaggatttggtaggtaattggttggagtagtgtatctcagattagtatcgatagagaaggtctttaagagctcacaggcagctatataattgagtaa  16469800         ------>ZmHOX2a(1)          --------->ANAC46              <----------DOF2        <----------DOF2         <----------DOF2            <---------ALFIN1           ------->TEIL           ------>NtERF2   --------->MYB59                <---------ALFIN1    --------->ANAC58   <---------At4g35610   --------->DAG2               ----------->RAV1(1)   --------->ANAC58   --------->At4g35610   ------   gtgataaggtcctttgagcattggaatgggtctgccacacactgcttcaaatgagcaagcccatgaagctttgtctgctccaagttgcagcctttctcaa  16469900                                                                <---------At4g35610                                                            <---------ARR14(2)                                                            <-----------GT1                                                            --------->ARR14(2)                  <----                                                          <---------HSFC1(2)                    -----                                                          --------->HSFB2a(1)                   -----                                                          --------->HSFC1(2)             <------ZmHOX2a(1)                                 ----------->GT1          <---------HSFB2a(1)      <---------YAB1 ---->DOF2           ------>ZmHOX2a(1)             --------->TOE1(2)            --------->GLK1(2)   agtctgccagtaaatgccacttcctgtgattcagacggtattaacagagggaacgaaggaagtttccgcttctctattggagagtctgataggaaaacag  16470000                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                              --------->DEAR3(1)                                                                             --------->MYB46(3)                                                                         --------->ANAC46                                                                         <---------MYB52(2)                                                                    --------->ZAT2                                                                 <---------ANAC58                                                                 <---------ANAC58                                                      <---------MYB52(1) --------->ANAC58      --------->ATHB12                               <-------GAMYB  --------->At4g35610          ---- -----ZAT14                             --------->ANAC46    <---------ICU4   --------->DEAR3(2) <---- ---->At4g35610     <---------At4g35610 ----------->HVH21 --------->TOE2(3) ------->TEIL        ----- ---->ZAT14    <---------ZAT14     --------->GLK1(2)<---------MYB46(3)   --------->ANAC58       <----   cagtggaatcgttggagtttagagatgacttatggagattccatgacactcggtctgttacctcattacctgctcacgaaccgacttatgcaatggataa  16470100                                                                                         <---------MYB52(1)                                                                                       <---------ZAT6                                                                                 <---------ICU4                                  <---------MYB46(3)                           --------->ANAC58                                  <------MYB83                       --------->ICU4    ----------->GT1 ------->GT1                      <------MYB46(1)                    <---------YAB1<---------YAB1 -----TOE1(3)                 <---------MYB46(3)        <---------At4g35610    --------->ANAC58 ---->DAG2                    --------->MYB52(2)        --------->At4g35610--------->ANAC46    ------ -----TOE2(3)              <------ZmHOX2a(1)           --------->MYB59<---------ICU4<-----------GT1   ggtaaatttgagtcgaactgaagttagaaggatagttggtttcgaatcaaatgaagttagctcagtgagtaatgaatacacaagtattactgttaatcgc  16470200                    <---------CCA1(1)         --------->MYB52(1)                   --------->ARR11(3)        --------->ARR14(2)                 <-------TEIL                <---------ARR14(2)                 ----------->ARR10          <------ZmHOX2a(1)                <--------P         --------->TOE2(3)              ----------->GT1      <-------GAMYB              <---------ANAC46    <---------MYB46(3)       ------>ZmHOX2a(2)          ===================================HOX2a_HOX2a     <---------ARR11(3)           ------>ZmHOX2a(2)     --------->ARR11(3)           =================HOX2a_HOX2a     <---------AGP1<---------ARR11(3) --------->MYB52(2)                 <----------DOF2     --------->ARR14(2)         <---------ARR14(2)            ------>ZmHOX2a(1)     <---------ARR14(2)         --------->ARR14(2)     <---------At4g35610      --------->LBD16   <---------MYB46(3) <---------YAB1<---------MYB52(1) --------->At4g35610    <---------LBD16 --->ZAT18   <---------TOE2(3)<---------MYB46(3)    <--------P--------->At4g35610               -----   actggtggatctaatgaggtagatattatcggtggatcgttagtcaggaaacgggtaagctctcctctgaataagcttttccctgagaaatttagaggcg  16470300  Previous    Next  AGI:  At5g41109.1    Description:  unknown protein Range:  from: 16469681    to: 16469821    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g41110.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26890.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26890.4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26890.5); similar to unnamed protein product [Vitis vinifera] (GB:CAO49066.1); contains domain PTHR13199 (PTHR13199) Range:  from: 16469826    to: 16472217    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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