Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ANAC58         ---------->DOF2                                          <---------ANAC58      --------->ANAC46                                        ------>MYB46(1)<---------At4g35610                                        -------->P    <---------ANAC58                                        ------>MYB83  <---------ANAC58                                      --------->DEAR3(1)      --------->REM1(1)                   --- -----ZmHOX2a(2)                      <---------MYB111(2)     <---------ALFIN1                    <-- ------>ARR11(3)                      <---------MYB46(2)    ------>ZmHOX2a(1)                    ---- -------ARR11(3)                    <------NtERF2    --------->ZAT18                           ------ ->DOF2              <---------YAB1 ------>NtERF2    <---------ZAT18              --------->CCA1(2)   gatcatccctcatctaatggctcatgttagcaattgtccgcctaccttgctaaattgcgctcctacacctaaagaaaactattgatatgagtcgtagtaa  16464100                                   ----------->GT1                       --------->YAB1                       <--------ATHB1                       --------->ATHB51                       -------->ATHB1                       <---------ICU4                      <---------ATHB12         ------>ZmHOX2a(2)      <------ZmHOX2a(1)    <---------ATHB12  <---------ATHB51      <---------AHL20(2)                      --------->AHL20(1)  --------->WOX13(1)  --------->ICU4        --------->ARR11(3)                      <---------AHL20(1) ------>YAB1       --------------->AGL15    <---------AHL20(1)                      --------->ARR11(3) -------ICU4       <---------------AGL15    --------->AHL20(1)                  <---------YAB1 ----->ICU4       ----------------->AGL3 --------->AHL20(2)                <---------AHL20(2) --->YAB1==============================HOX2a_HOX2a                        --------->AHL20(2)   taatcaatcgatctctctattccaataattgttaggagggtcataatatatagaagaagatagatgatatatgttatataatatgatatattgatatgtc  16464200                                                                     <---------WRKY12                                                    --------->ZAT2  --------->WRKY18(1)      --------                                               <---------WRKY18(1) <-----------HVH21         ------>NtERF2                             ---------->DOF2   <-----------GT1    --------->LBD16          <---------LBD16                    --------->TOE1(3)    --------->ARR11(3)     <---------LBD16          <-----------GT1                    --------->TOE2(3)    <---------ARR11(3)    --------->MYB52(1)   --------->TOE2(3)               ---------->DOF2     ---------->DOF2  --------->At4g35610          <-----------GT1<----   caaaaatcaaattgttcaaaagccttaatgaaaaagagaaagagatgtttgaccagcttaaaaacttccggtcaaacacctaaaaaccttttttccgcct  16464300                                                               <-----------HVH21                                                             <-------MYC3                                                             ------->MYC2                                                             ------->MYC4                                                             <-------MYC2                                                             <-------PIF5                                                             ------->PIF5                                                             ------->MYC3                                                             <-------MYC4                         <--                                                            <---------TGA1a                       <--                                                            --------->TGA1a                       ---                                                            --------->O2                          ---                                                            <---------O2                 <---------At4g35610                       <----------DOF2                      <---------ANAC55(2)          --------->At4g35610                       <---------DAG2                  <-----------GT1                <-------TEIL===                       ===============================================bZIP_DOF       <---------MYB52(1)      <---------ARR11(3)   ---------->ID1          <---------ARR11(3)       <---------At4g35610   <--      --------->ARR11(3)   <-----------GT1      --------->HSFB2a(2)         --------->At4g35610   <-- --------->YAB1     <-----------GT1        ===========================bZIP_DOF----------->HVH21 ----- ->LBD16       <---------DAG2              <----------DOF2  --------->ANAC55(2)  ------->TEIL   ----- ------DOF2    <----------DOF2        <---------ARR11(3)  <---------ALFIN1  ----------->RAV1(2) -----   ttgtcataaatctttgactttttgactttttccctctcaacatctcttttcgagatttcaccacgtgtcaaacctctcatctgaaccgttcatcttacac  16464400    <---------GLK1(2) -------ANAC58                                                 ----------->GT1 -------ANAC58                     <---------At4g35610     <---------WRKY18(1) ------>O2                         --------->At4g35610    --------->WRKY45 ------>TGA1a                 <----------DOF2             --------->WRKY38(1) ========================================bZIP_DOF         --------->WRKY12 -------TGA1a           ================================HOX2a_HOX2a -------O2              ------>ZmHOX2a(1)         *TSS    ----------->HVH21                     <<<<< ---->ANAC46         ===================================HOX2a_HOX2a                       <---------At4g35610 ---->ANAC58         ------>ZmHOX2a(1)           ------>ZmHOX2a(2)                  <----------DOF2<< ---->ANAC58     <-----------GT1  <-----------RAV1(1)   <----------DOF2 ---------->DOF2 <-----------GT1   gcgtgagattatctcattttctcctcctccgtctttctgctgtttcttcgatctgtttctttgaccagaaaaacaaaagcttcaaactttttagcttctt  16464500                                                           <---------CCA1(2)                                            --------->CCA1(1)                              --------->DEAR3(1)                                  --------->ANAC55(2)      ---------->ID1                 <---------ABI4(2)                             --------->ANAC46            <---------ANAC58              ---------->DOF2                             --------->ANAC58       <---------DAG2                --------->MYB46(3)                --------->WRKY12  <---------ANAC55(2)    <---------ANAC58       --------->ANAC58              <-------GAMYB <---------TOE1(2)<---------ARR11(3)                 --------->ANAC58 <<<<TBF1     --------------------->WRI1    --------->RVE1(1)               --------->ANAC58  ------- <<<<<<<TBF1 <---------ANAC46--------->ANAC58--------->ARR11(3)             --------->ANAC58 <------NtERF2   cttcttccttcaatgtcgttgaacacatcccacgatacttgacaaaatatctcactctttcgtctctctgttttcgactcgcaaaccatcgaagcgccga  16464600                                                                                      --------->ARR14(1)                                                                                     <---------GLK1(2)                                                                 <-------TEIL        --------->ARR14(2)                                                              <---------HSFC1(2)     --------->ARR11(1)                                                              <---------HSFB2a(1)    <---------ARR14(2)                                                              --------->HSFC1(2)    --------->HSFB2a(1)                                                           ---------->DOF2          <---------HSFC1(2)                                                         <---------YAB1             --------->HSFC1(2)                                                      <---------YAB1<---------MYB52(1)--------->CCA1(2)                                                    --------->CCA1(2)               <---------HSFB2a(1)                          <---------TOE1(3)        <---------ARR14(2)              ----------->ARR10         <------ZmHOX2a(1)<---------TOE2(3)        --------->ARR11(3)      ----------->GT1  --------->TOE2(3)  --------->ATHB12              --------->ARR14(2)      <------MYB83<-------TEIL -->DEAR3(1)        <---------YAB1                 <---------ARR11(3)      <------MYB46(1)        ---   ttaatcttagaggaatttcttcgtgattagggttttgtttagttctatctggagatatgatgaaagcttcgtttggaaggttaagaagattcgcattacc  16464700                                                                 <------NtERF2                                                                ------>NtERF2                                                                <---------RAP2.6(3)                                                               --------->ATERF1(2)                                                               --------->DEAR3(1)                                                               <---------ATERF1(2)                                                               >>>>>>>>>AtERF-2                                                               >>>>>>>>>AtERF-1                                                               >>>>>>>>>AtERF-7                                                               >>>>>>>>>AtERF-4                                                               >>>>>>>>>AtERF-3                                                               >>>>>>>>>AtERF-5                                                               --------->RAP2.6(2)                                                               --------->RAP2.3(3)                                                               --------->RRTF1(2)                                                               --------->RRTF1(3)                                                               --------->RAP2.3(2)                                                              --------->ATERF1(1)                                                              --------->MYB46(3)                                                              --------->RAP2.3(1)                                     <---------ZAT14          --------->DEAR3(2)                                     --------->ZAT14          --------->ERF1                                   --------->ANAC46           --------->RRTF1(1)                                 <---------ALFIN1            <---------ATERF1(1)                          <----------DOF2               <---------ANAC58                       ------                          <---------DAG2          <---------ARR11(3)                    <-----------GT1                       --------->ARR11(3)         --------->ARR14(3)          <-----------GT1<-------                       <---------ARR11(3)         --------->ARR11(3)  --------->At5g28300    <-------           <---------WOX13(1) <-----------GT1     <---------ARR14(3) ----------->GT1<----------DOF2 ------->DOF2       <------ZmHOX2a(1)<---------ZAT18    <---------ANAC58     <-----------GT1 --------   caaagccgatgcgattgatataggagagctttttcccactgcacaaattgaaggtcttgctcgagccgccaaggtaaattttccctcttttcactgatct  16464800      <---------GLK1(2)    <---------YAB1    --------->ICU4  --------->YAB1 >ZmHOX2a(2) ----ARR10                       <----------DOF2 --ARR11(3)                   <-----------GT1                    ----------->GT1              <------ ->ARR11(3)    <------------------------ANAC81    --------->ATHB12    <---------ANAC46 ----------->GT1   tctctcatgattctctgagatttagttttttttttcttttcaaaatcgtgagttattgatcacaagattgtaacttggatgagtttttgtggataaaaat  16464900                --------------->AGL15                <---------------AGL15               --------->ANAC58               ----------------->AGL2               <-----------------AGL1               <-----------------AGL3               <-----------------AG             <---------HSFB2a(2)        <---------YAB1               --------->ANAC58                 --------->HSFB2a(2)      <----------DOF2             <---------ALFIN1            <---------At5g28300   --------->AHL20(2)   <------ZmHOX2a(2)                 <----------DOF2           <---------AHL20(2)                  >> ---ICU4--------->YAB1            <------ZmHOX2a(1)          --------->TOE2(3)                     >>   ttccgatcaaaaatcacaccctaattggaaatttcaggacttttacagttatagaagtttgttcattaatttctacttttatagacttatcttatggaga  16465000  Previous    Next  AGI:  At5g41100.1    Description:  DNA binding. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G26910.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO49064.1) Range:  from: 16464450    to: 16468109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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