Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------ANAC55(1)                                                                                      <---------ANAC58                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(2)                                                                                    <-----------GT1                                                                    --------->CCA1(2) <---------ANAC58                                                      --------->ANAC58 <---------ARR11(3)    ----------->GT1                                   --------->ANAC58 --------->ARR11(3)   ------->MYC3                                 <-----------HVH21  --------->ARR11(3) <---------ANAC46   <-------MYC3                             <---------MYB52(1)     <---------ARR11(3)<---------TOE2(3) -------AHL20(2)                           <----------DOF2 <----------DOF2--------->HSFB2a(2) --->YAB1                     ------->TEIL <---------DAG2------->TEIL <---------CCA1(2)     <-------- -->AHL20(2)  <---------ARR14(2)          --------->TOE2(3)<---------DAG2 <---------HSFB2a(2)    <---   taaaacgtgtaaaacatatttggagttgaatgaaactacattttcctttatgtcaaacgcacttttcaagatatatctcgaacaatttacgtattatttt  16458600                      <---------TOE2(3)                      <---------TOE1(3)                      --------->MYB59                 <---------ICU4                                                           <---------AHL20(2)                 <---------AHL20(2)                                                      <---------AHL20(1)                 --------->AHL20(2)                                                      --------->AHL20(1)                 <--------ATHB1                                                        --------->AHL20(1)                 --------->ATHB51                                                      <---------AHL20(1)                <---------ATHB12                                                  --------->AHL20(2) -AHL20(2)      <---------ATHB51                                                  <---------AHL20(2) --------GT1    --------->ICU4        <-----------RAV1(1)                    <---------AHL20(2)   cacaaattttgttccacaataatttaggttattttggtttttgttgttgttttttgagtctgaaatttcaaatttgtatttttttttaatatatatttag  16458700                                    <---------TOE2(3)                                  --------------->AGL15                          --------->ARR11(3)                          --------->AHL20(2)                          <---------ARR11(3)                      <-----------GT1                          --------->AHL20(1)                      --------->MYB52(1)                          <---------AHL20(1)                  <---------ICU4                          <---------AHL20(2)                  --------->ATHB51             ----------                       --------->YAB1                         <--------HAHB4       <---------At4g35610   --------->GLK1(2)   --------->AHL20(2)                    --------->ICU4        --------->At4g35610  <---------GLK1(2)   <---------ATHB51                       <---------YAB1        --------->ZAT2 <------ZmHOX2a(1)    <---------ATHB12   ----------->GT1   --------->YAB1          <---------ZAT2  --   gcaggaatctttaaaatgaaaccaataatatattcactaagtttggaaaaaaaccaaaatttcataattaacgggacaatgactaagctgtggaaaagat  16458800                                                                                <------NtERF2                                                                             <---------LBD16                                                                           --------->DAG2                                                                          ===========================                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                 <---------ARR11(3)             =====                                                          <---------SPL7  ---------->DOF2       -----                         --------->ANAC58                <---------ANAC58============================                         --------->ANAC58                <---------ANAC58---------->DOF2--------->MYB46(3)                         --------->O2   --------------->AtSPL3   <---------ARR14(2)--------->ANAC58  <---------GLK1(2)      <---------ANAC46               --------------->AtSPL3 --------->LBD16------- >DOF2      <---------ATHB12            --------------->AtSPL8   --------->ARR14(2)--------->ANAC58 ------->YAB1            <---------ANAC55(2)            --------------->AtSPL8<---------ANAC46-------   aacataatctcccaatgactcaatgccacgtataagatgagaaccgtactcttctgtgttcgtaccagatccctcaaaaggcgggaagaaaccatcaaga  16458900                         --------->KAN4(2)                         <---------ARR14(2)                        <----------TaMYB80                        <---------HSFC1(2)                       ---------->TaMYB80            <---------bZIP60(2)            <---------TGA1a            --------->TGA1a            --------->O2<---------KAN4(1)            <---------ANAC58            <---------O2--------->HSFB2a(1)         ----------->HVH21         ----------->TGA1--------->ARR14(2)      ------>ZmHOX2a(1)        <---------ANAC58--------->KAN4(1)   --------->At4g35610        <---------ANAC58<---------HSFB2a(1) <---------ZAT2       <---------At4g35610                  <---------At4g35610       --------->At4g35610             <---------ARR14(2)    <------------CBF   <---------KAN4(2)    --------->ZAT2         <---------ARR14(2)  <-------TEIL      ----------->GT1    --------->ARR14(2)          --------->ARR14(2) =====================bZIP_DOF        <---------GLK1(1)           <---------CCA1(2) =====================bZIP_DOF        <---------CCA1(2)        ------>ZmHOX2a(1)     --------->AHL20(2) ----->DOF2 <---------ANAC46          --------->GLK1(1)     ---------->ID1           <---------AHL20(2) =====================bZIP_DOF    --------->ANAC58      <----------DOF2 <----------DOF2 -->ANAC58  <---------ANAC58      --------->ANAC46      <---------DAG2  <---------DAG2 -->ANAC58<---------TGA2(2)       --------->ANAC58   ------>ZmHOX2a(1)  *TSS<-----------GT1   aaggcacattgctgacgtggaatggaatattcgaacacgcatatccagctccttcctcctttttcctcatatcccttttttctcaatataaatactctgc  16459000                    --------->ANAC58                    --------->ANAC58                    --------->ANAC46                 ------>ZmHOX2a(1)             <---------ARR14(2)             --------->ARR14(2)            --------->GLK1(1)        --------->ANAC46        ----------->RAV1(1)                                        --------->ZAT6       --------->MYB46(3)                    <-----------ARR10   --------->ARR11(3)      --------->ANAC58                   --------->TOE2(3)       <---------ARR11(3)      --------->ANAC58               <---------GLK1(1)          <---------CCA1(2)        ------------   aaaaaaacacccacaaatcctcacacaaaaacgttttcgaaatccctaatctactctctcttctctatatctctactcttgagaaatggctcttagaact  16459100           --------->O2           --------->bZIP60(2)           --------->TGA1a  <---------ARR14(2)                                                   ----           <---------O2     --------->ARR14(2)                                                   <---           <---------bZIP60(1)     --------->ETT(2)                                      <------NtERF2           --------->bZIP60(1)     <---------ETT(2)                                     <---------DEAR3(2)           <---------TGA1a  <---------GLK1(2)                                           ------>NtERF2           --------->DEAR3(1)--------->GLK1(2)                                         <---------DEAR3(1)         ------>NtERF2  <---------LBD16                                             <---------ANAC46        ----------->HVH21--------->LBD16            <---------ARR11(3)              <---------ANAC58        --------->DEAR3(1)--------->LBD16           --------->ARR11(3)              <---------ANAC58 ----------->TaNAC69(2)--------->MYB52(1)       --------->LBD16                  <---------MYB52(1)   gtgctcgtctccgacgtccctagcctcccggattctgtctacggtttatccgaaggtatttctctctctgtctctctctctctgtttcgtcggctattga  16459200                                                                <---------TOE1(3)                                                                <---------TOE2(3)                                                                --------->MYB59                                                           <---------ANAC46                                                        ===============================bZIP_DOF                                                        <---------TGA1a                                                        <---------O2                                                        --------->O2                                                        --------->TGA1a                                                        <---------bZIP60(1)                                                     --------->DEAR3(1)             <---------MYB46(3)                                                     --------->TOE2(2)              --------->ATHB12                  ------>ZmHOX2a(2)                 --------->MYB46(3)  --------->LBD16             -            <---------At4g35610                     --------->DEAR3(2) <---------LBD16             --     <---------ANAC58   <----------DOF2           --------->MYB52(1)  <---------LBD16 <---------WOX13(1)     <---------ANAC58   ==========================================bZIP_DOF          --------->MYB55(2) ----->At4g35610--------->ARR11(3)             <---------At4g35610   --------->MYB52(1)            <- ------At4g35610<---------ARR11(3)       <---------ZAT6 --------->bZIP60(1) <----------DOF2       <--   gctgttttcgtttctgatgatcttgtctttgattacaggtttagagttgagcaaaccgacgtcgtttaggttaccggggttttcggtgattggacataga  16459300                                                                                        <---------ARR14(2)                                                                                        --------->GLK1(2)                                                                                        --------->ARR14(2)                                                                                  <---------MYB52(1)                                                                                 ------>NtERF2                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                                --------->RAP2.6(2)                                                                                --------->RRTF1(3)                                                                                --------->RAP2.3(2)                                                                                --------->DEAR3(1)             --------->ALFIN1                                                 ------>NtERF2             <-----------RAV1(1)                                              --------->LBD16          ------->TEIL                                                        <---------At4g35610       <---------YAB1                                                       <---------LBD16 -------->GLK1(2)                                                         <---------ARR14(2) ------->ARR14(2)             ------>ZmHOX2a(2) ---------->DOF2           --------->ARR14(2)    ----- --------ARR14(2)         ----------->HVH21 --------->ALFIN1    <----------DOF2--------->RAP2.3(1) ----ZmHOX2a(1)      <---------ATHB12       ----------->GT1 <---------GLK1(2)--------->ANAC46 <------   ggaatcggtatgaatgtgttgcaatcgtctgatcggagagcgagaggtgttaaagaaaactcgattctttcattcaattccgccgctaagtatccgattg  16459400                                 ==========================HOX2a_HOX2a                       <------MYB83                       <------MYB46(1)                      --------->MYB111(1)                      <---------MYB46(3)                      --------->MYB59                      --------->MYB111(2)                      --------->MYB46(2)                     <---------MYB55(1)                                            <---------YAB1                     <--------P  <------ZmHOX2a(2)   --------->ARR14(2)        <----------DOF2     -- --------->ATHB12 <---------TOE2(3)                  <---------ARR14(2)<---------ARR14(2)        <--- ---->ATHB12      <---------TOE1(3)                 <------ZmHOX2a(1)  --------->ARR14(2)        <--- ---WOX13(1)     <-----------RAV1(2)           <----------DOF2        <------ZmHOX2a(1)          <---   atttcattgagttcgatgttcaggttggtactccgatctatgtaatcaactttaggatttgaatgagacagaggattggggttttatgtttatgtttttg  16459500  Previous    Next  AGI:  At5g41080.1    Description:  glycerophosphoryl diester phosphodiesterase family protein. similar to SRG3 (SENESCENCE-RELATED GENE 3), glycerophosphodiester phosphodiesterase [Arabidopsis thaliana] (TAIR:AT3G02040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49062.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71478.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) Range:  from: 16458972    to: 16461213    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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