Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------MYB46(3)                                                                              <---------ANAC46                                                                            <---------MYB46(3)                                                                            --------->MYB55(2)                                                  <-------TEIL              <------MYB46(1)                                              <---------------AtSPL8        <------MYB83                                 <---------AHL20(2)                        <---------AtMYB61                                 --------->AHL20(2)                      <---------ANAC58      ------->TEIL              --------->AHL20(2)------->TEIL           <---------ANAC46  ------->TEIL<---------------AtSPL3          --------->ARR11(3)         <---------ANAC58     <------ZmHOX2a(1) ---->TEIL    <---------------AtSPL8      ---------->DOF2               <---------MYB46(3)   --------   tatgtatgtatgttaagatgtacagttttctctattaaaaaaaaaaaagatgtacattttgttgaaattcgaattgggtggtttgttcgaattacaggaa  16417500                          <---------At4g35610                          --------->At4g35610                        <---------WRKY38(1)                                              <------ZmHOX2a(1)            ---------->DOF2--------->MYB46(3)                                ----------------->AGL3         <---------HSFB2a(2)  <---------GLK1(2)                     --------->ICU4    --------->At4g35610 <-----------GT1        <---------WRKY12-------->ATHB1             <----------DOF2  --------->YAB1 ->ANAC46--------->HSFB2a(2)------->GAMYB   <-----------GT1      ---------->ID1  --------->YAB1  <---   atatcacagtttcagaaagtcgagagtcaacagactctcgaattattcacctagttttgaaaattttgtctttattagttccataatcagaggaatttat  16417600                                                                                             <-------                                                                                           <---------MYB46(3)                                                                                           --------->ALFIN1                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                        ------>NtERF2                                                                               <---------ARR11(3)                         --------->At4g35610                                   --------->ARR11(3)                      --------->At4g35610                                      <---------ARR14(3)                      <---------At4g35610                                  <<<<<<<<<WRKY18<---------DEAR3(1)                     --------->GLK1(2)                            --------->YAB1       <---------DEAR3(1)                ---------->DOF2                                  <---------YAB1--------->ARR14(3)         <---------MYB52(1)                            --------->ATHB12   --------->WRKY18(1)-------- --------GT1--------->At4g35610     ------->TEIL--------->ANAC46<---------ARR11(3)  ----------->HVH21   aacttattctcgttagcacaaagaagctgatgcctatgtatgcaaactttacacaattgatttcaaaatcatagaagtcaaggtcttcgacggctgtggg  16417700                                                          <---------ZAT6                                                <---------ANAC58                                                <---------ANAC58                           --------->YAB1                                      <----------DOF2     <---------YAB1                <----------DOF2      <---------ANAC58           --------->HSFC1(2)     --------->YAB1           <---------ANAC46      <---------ANAC58           <---------HSFB2a(1)  --------->ZAT14            <-----------RAV1(1) --ANAC46     <----------DOF2    <---------HSFC1(2)   <---------ZAT14        <---------ZAT14 ->ALFIN1 ---------->ID1         --------->HSFB2a(1)<---------YAB1           --------->ZAT14     <---   gacacattgtttgtcactttgtatttttctgtagaaatttctttggtgtttcttactatagtgatagtgggaaacacagtgttctgtggtctttgatgac  16417800                                                 --------->ARR11(3)                                                 <---------AHL20(1)                                                 <---------AHL20(2)                         ---------                                                 --------->AHL20(1)                       <----------                                                <-----------TBP          <<<<<<<<<TBF1 <----------DOF2        <-------MYC3                    ---------->ID1           <-----------GT1  *TSS <---------DAG2        ------->MYC3      <---------CCA1(2)--------->TOE2(3)  <---------YAB1    <-----------ARR10 -------DOF2   ---------->ID1          <-----------GT1    <------------CBF     <---------CCA1(2)   tttggggacacatgtttgtttttttctcttatcttctcatttttcccttaatatatagcacattgtgataccttcttcttcaaatctcacttttactcta  16417900                   --------->DEAR3(1)             --------->YAB1        <---------DAG2                                                           --------->GLK1(1)        <----------DOF2                                           --------->At4g35610 >ZAT6 <---------ANAC58                                  <---------AtLEC2        <---------GLK1(1) -GT1  <---------ANAC58                      <----------DOF2    <-----------RAV1(2)             -----   tctcttatggctttttcatcaccgtctgacttcaagagataccatgtcttttcgagtttccatggaccagatgtccgtagtggatttctcagtcatttac  16418000                                                                                              <------                                                                                  --------->ANAC46               --------->MYB52(1)                                   ----------->RAV1(2)       -------           --------->ANAC58                                      ----------->HVH21--------->ANAC58           --------->ANAC58                                     ------>ZmHOX2a(2) --------->ANAC58         ---------->DOF2             <------ZmHOX2a(2)     --------->SPL7<---------At4g35610  ------- <---------ATHB12    <------ZmHOX2a(2)       <------ZmHOX2a(2) <------ZmHOX2a(2)---------->DOF2     < ---->ANAC46  ---------->DOF2       --------->ARR11(3)   <---------SPL7  --------->At4g35610 <-------   acaatcacttcgaaagcaaagggatcactccgttcaaggatcaagagatcgagagaggccatacgatcggacctgagctcatacaagcgattagagaatc  16418100                                                            <------MYB83                                                            <------MYB46(1)                                                            <---------MYB46(3)                                                           --------->ALFIN1                                                           --------->MYB111(1)                                               <---------MYB46(3)  <---------ARR11(3)                                            <------MYB83   <---------MYB46(3)           <---------LBD16                    <---------ANAC46        <------MYB46(1)--------->MYB111(2)       --------->HSFB2a(1) ---ARR14(2)    <---------ANAC58           --------->ALFIN1--------->MYB55(2)  ---------->DOF2<------ -->GLK1(2)--------->ALFIN1                <---------DEAR3(1)      --------->ARR11(3)<---------HSFC1(2) -->ARR14(2)    <---------ANAC58           <---------MYB46(3)     <---------GLK1(1)  --------->HSFC1(2) ---------GLK1(2)<----------DOF2          <--------P       <---------AtMYB61 --------->ZAT18  <------ --GLK1(2) <-----------RAV1(1)<---------YAB1<---------At4g35610   --------->GLK1(1)  <---------HSFB2a(1)   tagagtctcgattgtggtgctttcggagaagtatgcttcttcgggctggtgcttagatgagttggtggaaatcttgaagtgcaaagaagcttcggggcat  16418200                                       --------->ANAC58                                       --------->ANAC58                                       --------->ANAC46                                      --------->SPL7                                      <---------LBD16                                    <---------ZAT14                                    --------->ZAT14                                    <---------SPL7                               <---------ZAT14                               --------->ZAT14                              >>>>>>>>>>>>>>>>>LFY    --------->ICU4           <-----------HVH21    <---------YAB1         ------>ZmHOX2a(2)    --------->ALFIN1                                   <- ---ANAC58         --------->DAG2<---------ANAC46                   <----------DOF2            ------ ---ANAC58        ---------->DOF2<------------------SPL14 <---------LBD16                   ---------   gctgtgatgactattttttataaagttgatccgtccagtgtacggaaacagtggggagacttcggaagtactttcaagaaaacttgtgaagggaaaaccg  16418300                                                                                                 <---                                                                                        --------->YAB1                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                      --------->AHL20(1)                                               --------->At4g35610                   --------->YAB1                                               <---------ZAT2                    --------->AHL20(2)                                               --------->ZAT2                    <---------AHL20(2)       <---------At4g35610    --------------->AGL15    --------->ZAT14    <-------GAMYB<---------YAB1    ---------->DOF2          ---------->ID1------->GAMYB        <---------ZAT14 --------->AHL20(2) -----ZmHOX2a(1)    ---------->DOF2       <------------AtMYB77  --------->ZAT14 <---------AHL20(2) --->TOE1(2)  --------->ALFIN1<---------ANAC46 <---------At4g35610       --------->MYB52(2)     <---- --------------->ANAC81  <----------DOF2 -------->P    <---------ZAT14   <---------MYB46(3)  <-------   aggaagtgaagcagagatggagcaaagctttggcctatatagcaaccgtagctggagaacactctctaaactggtttgttgattaaattataatgctttt  16418400  Previous    Next  AGI:  At5g40920.1    Description:  pseudogene, disease resistance protein (TIR-NBS-LRR class), putative, domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Range:  from: 16417882    to: 16421553    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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