Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                   --                                                       --------->TOE2(3)                           <-                                                    <---------ARR11(3)                         ------                                                    --------->ARR11(3)                         <-----                                               <---------YAB1                                <-------                                             --------->YAB1                                  <-------                               --------->AHL20(2)  --------->YAB1                      --------->ICU4                               <---------AHL20(2) --------->ICU4                       <---------YAB1                             <----------DOF2 ----------->GT1                          <---------TOE2(3)                     <---------ANAC58     --------->YAB1          ------->TEIL  <---------YAB1------- --------->YAB1      <---------ANAC58     --------->ATHB51     ----------->GT1--------->YAB1 <------- ---------ATHB12 --------->CCA1(2)       <---------YAB1<----------DOF2        --------->AHL20(2)<---- ->ZmHOX2a(1)   --------->ARR14(2)     --------->YAB1<---------YAB1  <----------DOF2<---------AHL20(2)   aaatcataaaaaccccaaaatatgcgtttttctttaaataactataattgtaattatctttaaaaatgtaacttttaaaattataaataatgtttaagat  16391700   --------->ATHB51  <---------YAB1 <---------AHL20(2) --------->AHL20(1) --------->AHL20(2) <---------AHL20(1) ---------ICU4 -------->YAB1 ------->ICU4 --------YAB1 --->ARR11(3) ----ARR11(3)                                                                                   ----- --TOE1(3)                                                                             ------>ZmHOX2a(1) --YAB1                                               <---------DAG2                   <------------- -->YAB1                                          <-----------------AGL2      <-------TEIL      <---- --TOE2(3)          ---------->DOF2             <-----------GT1        =======================HOX2a_HOX2a -----YAB1         --------->YAB1    <---------GLK1(2)<----------DOF2  ------>ZmHOX2a(2)  --------->YAB1   aattataattgaaaatttcaataaaagcattttagagcagaattttgttttatccacttttggactattttgatctcatatacattttcctataacaagt  16391800                                             --------->TOE2(3)                                         --------->KAN4(2)                                        --------->KAN4(1)                                        <---------KAN4(1)            <------MYB46(1)             --------->HSFC1(2)            <------MYB83                <---------HSFC1(2)                                       ----          <---------WOX13(1)            <----------TaMYB80                                       <---        --------->ATHB12                <---------HSFB2a(1)                                     <----       <---------YAB1                  ---------->TaMYB80            --------->ANAC58          ------  <----------DOF2        ----------->GT1--------->HSFB2a(1)          --------->ANAC58       --------- ---->ALFIN1----------->GT1     --------->DAG2            <---------AHL20(2)           --------->ANAC58 --AGL15<---------MYB46(3)     ---------->DOF2------>ZmHOX2a(1)  <-----------GT1       --------->ANAC46 -----REM1(1)     <---------AHL20(2)   <---------KAN4(2)<----------DOF2                --------->ANAC58   gtagctttgttgattggtataaaatggaagtaaaaaagtggaatattccttattatgtcttttattttcacaagcccaatacagtttctacgaaatgtat  16391900                                                                               ---------->DOF2                                                                               --------->YAB1                                  <---------AHL20(2)                          <---------ATHB12                                  --------->AHL20(2)                          --------->ICU4                           --------->ARR11(3)                               <---------------AGL15     <-----------GT1       <---------ARR11(3)                             <---------ZAT18 ----->ARR11(3)           <---------CCA1(2)                               --------->ZAT18 ------ARR11(3)       ----------->GT1             <---------AHL20(2)   <------MYB46(1) -----CCA1(2)     --------->AHL20(2)              --------->AHL20(2)   <---------ANAC58 ->TEIL    --------->AtMYB61      <---------AHL20(1)                   <---------ANAC58         ----- -->GT1--------->MYB46(3)------->TEIL            --------->AHL20(2)    <------MYB83            <-----   atctatttatccaccaaaaaaaaaatgtatatctattttatttgtttcttatttaattagcatcaccacaatttggtgcaataaagagtatcaaattatc  16392000                      --------->ANAC46                      --------->ANAC58            --------->YAB1                 --------->AHL20(2)              <---------AHL20(2)                 <---------AHL20(2)              <---------YAB1                --------->AHL20(2)              <---------AHL20(1)             <---------AHL20(2)                 --------->AHL20(2)             --------->AHL20(2)                 --------->AHL20(1)             <---------AHL20(1)                 <---------AHL20(2)             --------->AHL20(1)                --------->YAB1                             -----------            <---------AHL20(2)           --------->ARR11(3)                         --------------->AtSPL8        --------->AHL20(2)               <---------ARR11(3)      ------>ZmHOX2a(1)  <---------------AtSPL8        <---------AHL20(2)            <---------AHL20(2)     ---------->ID1  ------>ZmHOX2a(1)    --------->AHL20(2)--------->ANAC58--------->AHL20(2)--------->ARR11(3)  --------->TOE2(3) ---->YAB1  --------->AHL20(2)   <---------AHL20(2)   ----------->ARR10  --------->ARR14(2) ----YAB1--------->AHL20(2)      --------->AHL20(2)   <---------TOE2(3)  <---------ARR14(2)      ----   aaaacataaaataaataaatttataagccaaatattaaaataaaatctaatataataagatttgttcctatcccaaatcctaaatgtaagtacaacacat  16392100                                           --------->GLK1(2)                                     <---            --------->ANAC58        *TSS  <---------GLK1(2)                <---------At4g35610  -----            --------->ANAC58       --------->WRKY12                    --------->ANAC46         -----    --------->YAB1                 --------->WRKY38(1)           <---------ZAT14 --------------------   <---------YAB1                <-------GAMYB            --------->ZAT14  --------->At4g35610 ------ --------->YAB1                 <---------ANAC46     --------->ANAC55(2)   --------->ZAT2     <------ >RAV1(1)   --------->ANAC46    <---------ANAC58     <---------ANAC55(2)   <---------ZAT2<---------GLK1(2) ----->AHL20(2)                 <---------ANAC58 <-----------HVH21    <---------LBD16<-----------GT1   tatttataataaacaagacagaggtctgatatttgcgttgaacagaatcgttgtcacttgttcagtcttcactacggagctgttttttttcgattcgccg  16392200                                                                                                    <                                                                                                    x                                                            <<<<<<<<<TBF1                          <x                                                        --------->GLK1(2)                          <-                                                       --------->ARR11(3)                         xxx                                                       <---------ARR11(3)                         <xx                                                       <---------GLK1(2)                          <xx                                                       --------->ARR14(2)                         <xx                             <----------DOF2           <---------ARR14(2)                         <xx                            <---------DAG2            <---------HSFC1(2)                          <xx                         ------->GAMYB                --------->HSFB2a(1)                         <--    --------->YAB1      --------->MYB46(3)            --------->HSFC1(2)                         xxxx ---NtERF2              <---------MYB55(2)            <---------HSFB2a(1)                        xxxx ------>GT1          --------->REM1(1)               ----------->ARR10    --------->ANAC46       <xxx ---->LBD16     <---------ARR14(2)                 <------NtERF2          --------->ANAC58       xxxx ->WRI1--------->AHL20(2)<---------ALFIN1         --------->LBD16         --------->ANAC58       <xxx --->LBD16      <---------ARR11(1)               <---------HSFB2a(2) --------->ZAT6             xxxxx ---LBD16       --------->ARR14(2)              <---------LBD16  <----------DOF2         <-----------HVH21   gaaaaatcataaaatccaaatctacaaccacctttttatcgcaatccaatgccggaagattcttcttctttagactacgcgatggagaaggcatcagggc  16392300         <---------MYB52(1)        --------------------->WRI1        --------->LBD16       xxxxxxxxxxxxxxxx>smallRNA(i)       <xxxxxxxxxxxxxxxxsmallRNA(i)      <---------LBD16      xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxsmallRNA(s)  xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxsmallRNA(i) --------ALFIN1        ------>NtERF2 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       <---------MYB52(1) xxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <-----------HVH21 xxxxxxxxxxxxxxsmallRNA(i)                           ============================HOX2a_HOX2a ----NtERF2        ----------->HVH21                 ------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)               --------->ARR14(2)          --------->At4g35610 xxxxxxxxxxxxxxxx>smallRNA(se3)              --------->MYB46(3)           <------ZmHOX2a(2) xxxxxxxxxxxxxsmallRNA(i)                   --------->ANAC46             <-----------HVH21 xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          --------->ANAC58     <---------ZAT14         <<<<<<<<<TBF1 xxxxxxxxxxxxxxxxxxsmallRNA(fl3)            --------->ANAC58     --------->ZAT14      <<<<<<<<<TBF1 xxxxxxxxxxx>smallRNA(i)                  <---------ALFIN1  <---------CCA1(2)<---------At4g35610   ctcacttctccggtcttcgcttcgacggccttctctcttcttctccacccaattcctccgtcgtctcttcactccgatcagctgtttcttcttcttctcc  16392400                        --------->At4g35610                        <---------At4g35610                       --------->ANAC46            --------->LBD16                                                   <---------TOE2(3)           <---------HSFB2a(2)                                                <---------TOE1(3)           --------->HSFB2a(2)                                                --------->MYB59         <------ZmHOX2a(2)                                            <---------ANAC58 --------------        --------->ARR14(2)                                            <---------ANAC58<--------------        <---------ARR14(2)         <---------YAB1                <----------DOF2      <--------------   gtcttcttccgatcccgaagcgcctaagcagcccttcattatcggtgatttctcaaaccccatttcgctctagcgttgtttaggttttatcaaatttggg  16392500   <---------ANAC58   <---------ANAC58 ->AGL15 ---AG                  --------->HSFB2a(2)                               <---------GLK1(2) ---AGL1          --------->ATHB12     <----------DOF2              <---------YAB1    <---------YAB1   aaattgggttctgtctctcttgatttcgagagtttcttctgcattaacttcgttggaatctagggttttgatgatagaacctctgagtatggtagcattt  16392600  Previous    Next  AGI:  At5g40870.1    Description:  ATUK/UPRT1 (URIDINE KINASE/URACIL PHOSPHORIBOSYLTRANSFERASE 1); ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase. similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT3G27190.1); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT1G55810.3); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT1G55810.1); similar to predicted protein [Physcomitrella patens subsp. pa Range:  from: 16392136    to: 16395880    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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