Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ARR14(2)                                            <---------MYB46(3)         --------->At4g35610               <---------ANAC58              --------->ARR14(2)    <-------TEIL                           <---------ANAC58              <---------ARR14(2)   <--------P                   <---------ANAC46                         <---------ARR11(3)  <-------GAMYB           --------->WRKY38(1) <---------ARR14(2)        <---------At4g35610 <-------- <---------MYB46(3)       --------->WRKY12<---------LBD16  --------->YAB1--------->ARR11(3) <-------- ----------->GT1    --------->DAG2   ------->TEIL         <---------ATHB12<------ZmHOX2a(2)<---------At4g35610 -----ZmHOX2a(1)   ---------->DOF2  <---------CCA1(2)    <---------ARR14(2)               ------->TEIL ->YAB1  <---------At4g35610  ------>ZmHOX2a(2)          --------->ARR14(2)------>ZmHOX2a(2)<--------   aggaggttgatagctgaagaaaaaagcgttgatcgcttgaatcttgcggttccatcgccaatcttcagcgatacagatcccatacttcaatgtagcttat  16373100                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                             --------->GLK1(1)                                             --------->At4g35610                                            --------->ARR14(2)                                            <---------ARR14(2)                                           <---------ARR14(1)                                           <---------CCA1(2)                                         ------>ZmHOX2a(2)                                      --------->ATHB12                                  --------->TOE2(2)                  ---------->DOF2 -ANAC46                          --------->TOE1(2)                --------->ANAC58                -- -ANAC58                        ------->TEIL<---------AGP1         --------->ANAC58       <---------HSFB2a(2) -ANAC58       --------------->AtSPL8<---------YAB1         --------->YAB1                --------->HSFB2a(2)   attgcatcaattccaaatttgttccatattgttgaacctatgatcggatctgcaaatttcaaacatgaaacgaaagagcatcaaataggtttctgaaaca  16373200                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                           ------>ZmHOX2a(2)                                              <---------AGP1                          <------ZmHOX2a(2)                                               --------->ARR14(3)                         <---------ARR14(2)                                               <----------                         --------->ARR14(2)                                               <---------ARR14(3)                         <---------ARR11(3)                                               <---------ARR14(2)                         --------->ARR11(3)                                               --------->ARR14(2)                        <------ZmHOX2a(1)                                                 <---------ARR11(3)                    =============HOX2a_HOX2a                                     --------->YAB1                    ==============HOX2a_HOX2a                                 --------->WOX13(1)            <---------ARR11(3)                <-------TEIL              ------>ZmHOX2a(2) --------->ARR11(3)   ---------->DOF2  ------>ZmHOX2a(1) <---------------AtSPL8           <---------------------WRI1 ------->YAB1     ----------->RAV1(2) --------------->AtSPL8  --------->MYB52(1)<---------ATHB12    <   atgacaaaagagaagaactatcctgaggatccttgaaatttttgtacatacataaatagtccaataacagatgatcgaaacaatcaagagaagatctcaa  16373300                                      <---------ATHB12                                    ------>MYB83                                    ------>MYB46(1)                                  <---------MYB59                                 ----------------->AGL1                                 ----------------->AG                             ===========================HOX2a_HOX2a                             ------>ZmHOX2a(2)                            ============================HOX2a_HOX2a                            <------ZmHOX2a(2)                           <---------ARR11(3)                           <-----------ARR10                           <---------ARR14(2)                           --------->ARR14(2)                        --------->ANAC58 --------->HSFB2a(2)       --------->ARR11(3)                        --------->ANAC58 <---------HSFB2a(2)       <---------AGP1            --------->YAB1 --------->DAG2 -ARR10       <---------ANAC46 <-----------GT1   <------ZmHOX2a(1) ---------->DOF2                 -- ---------LBD16            --------->AGP1  ---------->DOF2   ------->TEIL                  ----------   tttctgggatttagtaacgagtatcaacagatcttaccaaatcaaaaaagaggaatcacgatgaatataaaaagcaatatgagattaatagcatcgaaaa  16373400                                     -------->P                                     ------>MYB46(1)                                                <                                     ------>MYB83                                                   <                                   <---------MYB59                                                  <                                <---------ZAT18                                                     <                               ----------->HVH21                                                    <                          --------->CCA1(2)                                                        <-                          <------ZmHOX2a(2)                                                      ----                         <---------ARR11(3)                       --------->DAG2       --------->ANAC58                         --------->ARR11(3)                      ---------->DOF2       --------->ANAC58                         --------->ARR14(2)        --------->At4g35610               ================                         --------->AGP1         --------->At4g35610                  ---------->DOF2<   ---------->DOF2       <---------ARR14(2)     <---------At4g35610        ---------->DOF2       ---- -------->DOF2          <---------GLK1(1)     <-----------RAV1(2)==================================== ->GT1                  --------->GLK1(1)<---------YAB1 ------->TEIL       ==========================   acaaagaaagaagagagacttacgagagatccagtgacctactctgattcagccgatgaacatatcgaaaagtatagaaaagtatagaaaagctactgag  16373500           ----------->HVH21           ----------->TGA1       ==================================================bZIP_DOF       <---------ANAC46       <---------ANAC58       <---------ANAC58       <---------O2       <---------TGA1a    ----------->HVH21                           ----------->GT1    ----------->TGA1            ----------->RAV1(1) *TSS  <---------bZIP60(2)      ------>NtERF2 ---------->DOF2 ---------TGA1a                 --------->ORA47(1) ---------O2  <---------ANAC46 <---------ETT(1)--------->DAG2      <----------DOF2 ---------ANAC58               --------->At1g77200         <---------AHL20(1) ---------bZIP60(2)            --------->RAP2.3(3)         <---------AHL20(2)                    ---- ---------ANAC46               --------->DREB2C(2)         --------->AHL20(1)               <-------- ----------------------TaNAC69(2) <---------MYB52(2)      --------->YAB1                 <---------YAB1 ------->TGA1 <---------bZIP60(2) --------->MYB46(3)      --------->AHL20(2)            <---------AHL20(1) ================bZIP_DOF      --------->DEAR4(1)     <---------AHL20(2)                --------->AHL20(1) ---------ANAC58               --------->DEAR3(1)     --------->AHL20(1)                <---------AHL20(2) ------->HVH21<---------O2    --------->RAP2.3(1)     <---------AHL20(1)               --------->AHL20(2) =========bZIP_DOF     <---------GLK1(2)   --------->YAB1<---------YAB1                --------->YAB1 =========bZIP_DOF<------ZmHOX2a(1) --------->MYB52(1)--------->AHL20(2)               <---------AHL20(2)   tgacgagtgacgagtgacgaggacagaatatcgccgacaaacgaataataaagtaatttattatattctctttttttttttttggcaaattatatttcca  16373600                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     <---------AHL20(2)                                                     --------->AHL20(1)                                          ----------->RAV1(1)                                         --------->REM1(1)       <---------YAB1                  ------>ZmHOX2a(1)                       --------->AHL20(2)     --------->YAB1                   --------->TOE1(2)          <---------AHL20(2)    --------->AHL20(2)            <-----------GT1    --------->AHL20(2)      <---------AHL20(2)    <---------AHL20(2)           <---------AHL20(2)  <---------AHL20(1)      --------->AHL20(2)   --------->AHL20(2)     <---------bZIP60(1)   --------->AHL20(2)         <---------YAB1 ----->AtLEC2 <---------TOE2(3) --------->AHL20(2)  --------->AHL20(2)    <---------AHL20(1) ---GT1<---------AHL20(2) --------->bZIP60(1)   <---------AHL20(2)  <-----------GT1          --------   ttcaaatttataatttgatgttattttgatgtcatttaatcctacaacatataaatatattagttattttatacattatttttatatatagccatttaaa  16373700                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                       --------->TOE2(3)                                       <-----                                       <----------DOF2                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                 --------->YAB1                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <---------AHL20(2)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                             --------->AHL20(2)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       --------->AHL20(1)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<                       <---------AHL20(1)             --------->AHL20(2)          <---------AHL20(2)-                       <---------AHL20(2)--------->AHL20(2) <---------ANAC55(2)  --------->AHL20(2) -          <---------AHL20(2)<---------AHL20(2)        <---------AHL20(2)         <---------AHL20(1) <   ------>ZmHOX2a(1)  --------->AHL20(2) <---------AHL20(2) --------->ANAC55(2)  --------->AHL20(1)-- ->AHL20(2)           --------->YAB1   --------->TOE1(3)  --------->AHL20(2)     <---------AHL20(2)<-   acatcctactatattatttgagaattatattttaaatataactttaatttttgtaagtaattacataagtatgccattagaaataaaattttaaaaatta  16373800                                                     --------->AHL20(1)                                                     --------->AHL20(2)                                                     <---------AHL20(2)           <----------DOF2                          --------->AHL20(2)      <-----------GT1                               <---------AHL20(2)    <---------AHL20(2)                           <---------AHL20(2) --------->AHL20(2)                              --------->AHL20(1) <---------AHL20(2)                              --------->AHL20(2) -----AHL20(2)                                  <---------AHL20(2) ---->AHL20(2)                              <---------AHL20(2) ---->AHL20(1)                              <---------AHL20(1)               --------->AHL20(2) --->AHL20(2)                               --------->AHL20(1)           <---------YAB1  --------->AHL20(1) ----AHL20(2)                               --------->AHL20(2)           --------->ICU4 --------->YAB1 ---------AHL20(2)                      --------->AHL20(2)      <----------ID1<---------AHL20(2)    < -------->AHL20(2)                      <---------AHL20(2)      ----------->GT1     --------------->AGL15 -------->AHL20(1)                     <---------AHL20(1)     --------->MYB52(1)    ================= ---------AHL20(1)          --------->AHL20(2)  --------->AHL20(2)      --------->TOE2(3)--------->AHL20(2) ------->AHL20(2)   --------->AHL20(2) --------->AHL20(2)--------->AHL20(2)  <---------AHL20(2)   --- --------AHL20(2)   <---------AHL20(2) <---------AHL20(2)<---------AHL20(2) <---------YAB1 --------->YAB1   aattaatttatctctttaaaaattaaaaaatcaaatactaatttaattaattaaattaattaaaaaacgaaaaacattattaatttccaaaaataatagc  16373900                                                 --------->AHL20(2)                                                <---------AHL20(1)                                                --------->AHL20(2)                                                <---------AHL20(2)                                               ==================================================MADS_MADS                                               <---------------AGL15                                            <---------AHL20(2)                                            --------->AHL20(2)                                    <--                                        <---------AHL20(2)                                        ---                                        --------->AHL20(2)                                       ----                                       --------->AHL20(2)                                        ----                                       <---------AHL20(1)                             --------->DAG2                                   <---------AHL20(2)                            --------------->AGL15                                   --------->AHL20(2)                           ----------------->AG                                   <---------YAB1<---------AHL20(2)        <---------AHL20(2)   <----                                  <---------AHL20(2)                      --------->AHL20(2)  -------                                  --------->AHL20(2) --------->YAB1       <---------AHL20(2)---------                           >>>>>>>>>RAP2.2 --------->AHL20(2)         --------->ICU4 ---------->DOF2 --------->YAB1          <---------ARR11(3)<---------AHL20(1)      <-------TEIL ===================== ---------ATHB12         --------->ARR11(3)<---------AHL20(2)--------->ANAC58   ----------------->AGL3 ==============================================================MADS_MADS <---------YAB1   <---------- ------>WOX13(1)   --------->CCA1(2)   <---------AHL20(2)    --------->ANAC58   ----------------->AGL1   caatcaaaatcaacatataagatttgatatctaaattttaattaatttaatttaattagaaaaacgaaatacattattaatttccaaaaaagtaaccaat  16374000  Previous    Next  AGI:  At5g40830.1    Description:  (ARABIDOPSIS THALIANA RAS ASSOCIATED WITH DIABETES PROTEIN 3); methyltransferase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27230.1); similar to hypothetical protein [Prunus persica] (GB:AAO14627.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 16371608    to: 16373501    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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