Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->YAB1                                                                         --------->YAB1       <------ZmHOX2a(1)                                                             ---------->DOF2   --------->ANAC46                                                 --------->GLK1(2)  ----------->GT1 <---------ATHB12                                   ----------->RAV1(1)     --------->At4g35610 --------->ANAC58                         <---------ZAT6         <---------GLK1(2)  ----------->GT1--------->WOX13(1)          ----------->HVH21       --------->MYB46(3)       <---------At4g35610 --------->ANAC58   ---   aactcttgaagagtgacccaaatgctagtgaaaacaacaacacttacacaaattctggttcagcaaagaagggaataatacgagcaatcacagggaggat  16370700                                     <---------ANAC58                                     <---------ANAC58                                    --------->MYB52(2)                                 --------->KAN4(2)                                --------->KAN4(1)             ----------->HVH21  <---------HSFB2a(1)            --------->LBD16     <---------HSFC1(2)           --------->ANAC55(2)  --------->HSFC1(2)           <---------ANAC55(1)  --------->HSFB2a(1)    --------->ANAC58           <---------ANAC58     <---------KAN4(1)      --------->ANAC58           <---------ANAC58--------->LBD16          ------>MYB83                        <---------ANAC46           <---------ANAC46--------->HSFB2a(2)      ------>MYB46(1)                     <---------ANAC58           <---------ANAC55(2) <---------KAN4(2)    -------->P                       <---------MYB52(1)        --------->ARR14(2) <---------HSFB2a(2)   --------->MYB46(3)   --------->At5g28300        <---------ARR14(2) ------>ZmHOX2a(1)  ----------->HVH21    --------->At4g35610  <---------ANAC58       <---------GLK1(1)  <---------LBD16 <---------ANAC46         --------->ZAT2   <-------GAMYB --- ------>At4g35610        ----------->RAV1(2)--------->ALFIN1       <---------At4g35610--------->WRKY38(1)   agcagaaggggttccgtgatagaagactcctggaatgttccttgctgtgtgaccaacaagcttcagaacagctgtaacttccctcccgttgcctgtgaaa  16370800                                               <---------ZAT2                                   --------->LBD16              <---------TOE2(2)    ------>NtERF2              <---------TOE1(2)   <---------LBD16            --------->TOE1(2)     <---------ETT(1)            --------->TOE2(2)    --------->RAP2.6(3)                                     <---------At5g28300     --------->ANAC58      <---------ATHB12    --------->ZAT2                      <-------GAMYB     --------->ANAC58 --------->TOE2(3)       --------->ANAC58                    ----------->GT1    --------->DAG2    <---------MYB59         --------->ANAC58                 ------------>AtMYB77   ---------->DOF2    --------->TOE1(3)       --------->ANAC46                 ------------>MYB.PH3(1) -------->GT1------>ZmHOX2a(1)   <---------LBD16     --------->YAB1  ----------->GT1 <---------ICU4   ttggaaaaagcaatcctaggttaacctaaatcaattccggcaaaatccaagctaagaatcatccaagggaacagaaacaagagacagttattaccgagag  16370900                                                                                       <---------MYB46(3)                                                                                       --------->MYB111(2)                                               <---------ARR11(1)                   <---------MYB46(3)                                              <---------GLK1(2)                 <---------ANAC46                                              <---------ARR14(1)              --------->MYB52(1)                                      --------->ANAC58                       ----------->HVH21   <---                                      --------->ANAC46                --------->LBD16 <--------P<----          <------MYB46(1)             --------->ANAC58               --------->ANAC46<-------GAMYB --          <------MYB83           <---------bZIP60(1)                 <---------HSFB2a(2)       ------         <---------TOE1(2)       --------->bZIP60(1)      <-----------ARR10  ----------->TGA1<-------         <---------TOE2(2)    ----------->HVH21------->TEIL          --------->HSFB2a(2)<-------GAMYB       --------->TOE2(2)  <---------TOE2(3)   <---------CCA1(2)     <---------LBD16<---------TOE2(2)   aaggaacaacgtaggtattcaatagattagggatgacagcacgaaatcgaatctctagagcatcttcgtctccggaagagtgacggaggttgttagccgg  16371000                ------>NtERF2              --------->DEAR3(1)              --------->ATERF1(1)             <---------ATERF1(1)            --------->RAP2.6(2)        <---------ARR14(2)       --------->ATERF1(1)       <-------GAMYB       <------NtERF2      <---------MYB46(3)     <---------ANAC46    --------->ANAC46    <------NtERF2    --------->DOF5.7(2)  <---------ZAT2    --------->ATERF1(1)<---------DOF5.7(2)--------->ZAT2  <---------DEAR3(1) <-----------HVH21   ------>MYB83      <---------ANAC58 ------ANAC46------>NtERF2               ------>MYB46(1)   <---------ANAC58 --NtERF2  <---------RAP2.6(2)  <---------ANAC46       <---------YAB1                   <---------ARR11(3) ------->ALFIN1<---------ALFIN1 <---------ANAC58    <---------YAB1--------->ANAC46      --------->ARR11(3) --->LBD16--------->ATERF1(1)   <---------ANAC58   <---------GLK1(2)      <-----------GT1 --LBD16--------->ARR14(2)     <-------TEIL  --------->ETT(2)   ------>ZmHOX2a(1)      --------->At4g35610   agtggaggcggatgcggccacccgttcacgaagttcgtgaaccaagctcgacagattattgtcgtccttcgccatttcacaatcgcagaagctctctcgc  16371100                                                      --------->AHL20(2)                                                      --------->AHL20(1)            <---------YAB1                                            --------->TOE2(3)                      --------->ARR11(3)                                            ----------->GT1                        <---------ARR11(3)                                           ----------->GT1         ==================================                                       --------->AHL20(1)          <-----------------AG           <--                                       --------->AHL20(2) --------->AHL20(2)      --------->RVE1(1)                                       <---------AHL20(2) <---------AHL20(2)      --------->CCA1(1)                                  --------->AHL20(2)  <---------AHL20(2)   ----------->GT1 <---------TOE1(3)   <---------ZAT18        *TSS---------->DOF2        --------->AHL20(2)<---------ARR14(2)  <---------TOE2(3)   tccagtccccttccccttccctcccaatttttaaaagaaaataaaatgttaaaaaaaaaattaaaaaaaaacatatttgggaaaatatcatttaagggtt  16371200                      <---------MYB52(2)                      --------->DOF5.7(2)                     --------->At4g35610                     ------>NtERF2                     <---------At4g35610                    --------->RAP2.6(2)                    --------->RRTF1(3)                    --------->RAP2.3(2)                    --------->DEAR3(1)                   --------->RAP2.3(1)                   <------NtERF2                                  --------------->AGL15                  --------->LBD16                <-------GAMYB    <---------------AGL15                  <---------ATERF1(1)            <---------At4g35610                  ------>NtERF2       --------->LBD16     --------->TOE2(3)                 --------->ANAC46     <---------MYB46(3) ----------->GT1                --------->MYB46(3)   <---------ANAC58   <---------TOE1(3)                           <                <---------MYB55(2)   <---------ANAC58   <---------TOE2(3)                           <           <---------At4g35610       <---------ANAC46  <---------DOF5.7(2)                          -           --------->At4g35610      <---------LBD16    --------->MYB52(1)                         ---          --------->ANAC46   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)----------------->AGL3           ---         <---------LBD16--------->MYB52(1)<---------MYB46(3)     ----------------->AGL2          ----        <-----------GT1----------->HVH21  --------->ATHB12--------->TOE1(3)                    ------ =================================================================================MADS_MADS    <----- ---------GT1 -------->P<---------DOF5.7(2) <---------WOX13(1)<---------CCA1(2)              <-------   taactggtttttccgctacccgccgctaacgctgcatttgcgggtgattgcagttgctaacgttatatccaattacagaaaatgttttcaatcgctccgg  16371300         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->REM1(1)      --------->ANAC46      <---------ALFIN1     <---------ZAT14                        ------->TEIL     --------->ZAT14                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->SPL7                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------SPL7                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------ZAT14                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------TOE2(3) -------->ZAT18                 --------->YAB1               --------->TOE2(3) ------------>AtSPL3          --------->ANAC58               --------->TOE1(3) ------------>AtSPL8    --------->GLK1(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   < ----->SPL7  --------->ANAC58 --------->AtLEC2     --------->ATHB12  <---------AHL20(2)   xxxxxxxxxxx --->LBD16   --------->ANAC58 --------->ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <---------AHL20(2) ----SPL7--------->DEAR3(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->AHL20(2)<---------AHL20(2) --LBD16--------->ANAC46<---------ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       --------->AHL20(2)   accgtactacaccgctcgaaatcgcgaattccaagcataaactttgcacctagtgatttgaaacctcaaattttatgttgagtttcaatttaatctcgaa  16371400                                      <------NtERF2                                     --------->LBD16           <----------DOF2          ----------->GT1                       ------->TEIL          -----      <---------LBD16               --------->RAP2.6(2)              --------->YAB1             <---- ----------DOF2       <----------DOF2----------->GT1         <---------ARR14(2)      <----------DOF2 xxxxxxxxx>smallRNA(se3)           <---------LBD16           --------->ARR14(2)    ------>ZmHOX2a(1)   ttcttttactcggatttattgtttctttctcgtttgagccggaaaaaaaaccctgttagactggatttgtatcatgaacttgttcctctttgctagacta  16371500          <---------ANAC58          <---------ANAC58          <---------ANAC46     --------->At4g35610     --------->ZAT2                      --------->At4g35610     <---------At4g35610     ---------->DOF2                                       <---------AtLEC2     <---------ZAT2        <------ZmHOX2a(1) <---------ALFIN1              <------ZmHOX2a(1)      <-- ---->ZAT14     --------->ANAC46       <------NtERF2                       ========================== -----ZAT14<----------DOF2<----------ID1 --------->GLK1(1)     --------->At4g35610<-------TEIL  <----   ctctgtaagctggcttattcggcacataaggaaaagaaggcagagctccatctcagagacaaattggctgaacatgaggaaatgttcatggagttatagg  16371600  Previous    Next  AGI:  At5g40820.1    Description:  ATRAD3 (ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED); inositol or phosphatidylinositol kinase. Identical to Serine/threonine-protein kinase ATR (ATR) [Arabidopsis Thaliana] (GB:Q9FKS4;GB:Q9MAZ4); similar to TOR (TARGET OF RAPAMYCIN) [Arabidopsis thaliana] (TAIR:AT1G50030.2); similar to TOR (TARGET OF RAPAMYCIN) [Arabidopsis thaliana] (TAIR:AT1G50030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47439.1); similar to Serine/threonine-protein kinase ATR (GB:Q5Z987); similar to Serine/threonine-protein kinase ATR (GB:A2YH41); contains InterPro domain PIK-related kinase, FATC (InterPro:IPR003152); contains InterPro domain Arma Range:  from: 16359973    to: 16371126    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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