Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->ATHB12                                                 <---------AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                                               <---------AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                            --------->ARR11(3)                                      --------->LBD16                                     <---------ANAC46                       --------->AHL20(2)   <---------ARR11(3)                   <---------CCA1(1) <---------ANAC58                   <---------RVE1(1) <---------ANAC55(1)                  --------->AHL20(1) --------->ANAC55(2)                                            -                  --------->ARR11(3) <---------ANAC58                                             ---                  <---------ARR11(3) <---------ANAC55(2)<-------TEIL                              <--        <---------ARR14(2)           ----------->GT1--------------->AtSPL8                       ----        --------->ARR14(2)        --------->GLK1(2) <---------------AtSPL8                       <---        ------->TEIL   <---------AHL20(2)   <---------AHL20(1)                                   ----       <---------CCA1(2)         <---------GLK1(2) <---------WOX13(1)                            <---  <-------TEIL---------->DOF2---------->DOF2--------->AHL20(1) <---------AHL20(2)            --------   gacattcatgtatctgaaaagatattaaaacaaaagattccgtgaatatattaattggtacatataaaaatccaaaaacatactactaaattcgaataaa  16340500                                                                                   <-----------GT1                                                                                   --------->MYB52(1)                                                                                  --------->AHL20(2)   <---------YAB1                                                             --------->ICU4 <---------ICU4                                                               --------->AHL20(2) --------->YAB1                                                               <---------ATHB51 -------->ICU4                                                                <---------AHL20(2) ------>YAB1                                                      --------->AGP1  <---------AHL20(2) -------ICU4                                                 --------->MYB52(1)<---------ICU4 ----->AHL20(2)          <---------AHL20(2)               --------->ANAC46   <---------AHL20(1) ------AHL20(2)     <---------------AGL15                --------->ZAT14     --------->AHL20(2) ----->ICU4         --------------->AGL15                <---------ZAT14 --------->ANAC46 ------ATHB51<---------At4g35610                     <---------ICU4    --------->ANAC46             - ->AHL20(2)  --------->At4g35610                     <-----------GT1------>ZmHOX2a(2)            <---   taattatgtttagggagcttcacttatttaagtatagcatctatgactaatctaattactacacaactgatctacacaaaataattaactgaacaaaata  16340600                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                            <--------HAHB4                                                                                            <--------                                                          --------->ANAC46                  ---------                                                          --------->ANAC55(2)              <---------YAB1                 --------->ANAC58                  <---------AHL20(2)                      --------->ICU4           --------->AHL20(2)                  ------>ZmHOX2a(1)                         --------->YAB1           --------->AHL20(1)                --------->YAB1                         --------->AHL20(2)           <---------AHL20(2)                ----------------->AGL3                 <---------AHL20(2)          --------->AHL20(2)               ------>MYB46(1)<---------ANAC55(2)      <---------AHL20(1)    <-----------GT1                        ------>MYB83   --------->ANAC58         <---------AHL20(2) -------->AHL20(2)   --------->MYB52(1) --------->MYB46(3)--------->ANAC58         --------->AHL20(2) ------ANAC55(2) --------->ANAC58     <-----------GT1   <-----------GT1            --------->AHL20(1)   cttaaattacaaattaattaagcaaacggtcttcccttgttaaccaatcctatttaagttacgaaactagggatagtatatgaaatttaattcataatta  16340700                                           <---------AHL20(2)                                           --------->AHL20(2)                                          --------->AHL20(2)            --------->ARR11(3)                                          <---------AHL20(2)            <---------ARR11(3)                                      <---------YAB1                    <---------AHL20(1)                                <---------YAB1                          <---------AHL20(2)                                --------->AHL20(2)             --------->MYB46(2)                                <---------AHL20(2)             --------->MYB111(1)    <---------ANAC46        --------->CCA1(2)                  --------->MYB59          <---------ZAT2 -------GT1                --------->ARR11(3) --------->AHL20(2)<------MYB83            --------->ZAT2 ----AHL20(2)      --------->YAB1   <-----------GT1          <---------MYB52(1)         <---------At4g35610 --->AHL20(2)  <---------AHL20(2)  --------->ICU4     --------->GLK1(2) --------->AHL20(2) -ICU4 <---------MYB46(3)  <---------ARR11(3) <---------AHL20(2)<------MYB46(1)         --------->At4g35610 >ATHB51       --------->AHL20(2)<---------ICU4      <---------GLK1(2)  --------->AHL20(1)   <-------   aacatttagtggatgaattaattgtaagagatatataattactattaatttataagattctatgttaggttgaatatattagaagagtccagctcataac  16340800                                                                               *TSS                                                <---------DAG2                 --------->YAB1      --   <---------ZAT18                              <----------DOF2       <----------DOF2    --------->YAB1 --CCA1(2)                --------->ZAT14    <---------ALFIN1      <-----------GT1    --------->YAB1   tcttgtgcccatctccacaagtagtttgtgaagtcaaacaaaaacttccacttttaaaattttctcttatttctttctctctcataagtcataatattca  16340900                                                                           <----------DOF2                                                                        <---------AHL20(1)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                       --------->CCA1(1)      -------                                                           <---------AHL20(2)         --------->ALFIN1                                                          <---------AHL20(1)         <-----------HVH21             --------->AHL20(2)         --------->YAB1    --------->AHL20(1)  --------->HSFB2a(2)        <-------TEIL            <---------ANAC58         <---------------AGL15<---------HSFB2a(2)   <---------AHL20(2)    ------->TEIL--------->YAB1  <----------DOF2   --------->RVE1(1)  ------>NtERF2 ------->AHL20(2)<-----------GT1<---------ANAC58 <------ZmHOX2a(1)--------->YAB1    --------->ALFIN1   actaattaagtgcatatatatacgatgtatcagtgcttataatcttcatgaggagctttatatatttagcataatatctttcagaagtgtgaggccttgt  16341000                                                                       --------->YAB1                                                                      <---------YAB1                                                                      --------->ICU4                                                                    --------->YAB1                                                                    <---------ICU4                                                                   --------->ICU4                                                                   <---------YAB1        ------>ZmHOX2a(1)                                                          --------->ANAC58      --------->MYB52(2)                                                          --------->ANAC58  <---------YAB1     <---------ARR11(3)                              <---------At4g35610<---------ARR11(3)     --------->ARR11(3)                              --------->At4g35610--------->ARR11(3)   <------- ---->GT1             xxxxxxxxxxxxxxxx>smallRNA(i) <--------P   ------>ZmHOX2a(1)    <-----------GT1   taattaagctcttcttctctatctctctctctccctctcaacctctcaccatggtagctcaagctcctcatgatgatcatgttagtttctcctctctttc  16341100                              <------ZmHOX2a(2)                             --------->ARR11(3)                             <---------GLK1(2)                             <---------ARR11(3)                             <---------ARR14(2)                             --------->AGP1                             --------->ARR14(2)                             <-----------ARR10                             <---------ARR14(3)              <----------DOF2--------->ARR14(3)                  ------>ZmHOX2a(2)              <---------DAG2<---------CCA1(2)                  --------->ARR11(3)    --------->ANAC58       <---------YAB1<---------YAB1      <------------------------ANAC81       <---------YAB1     <-- ---DOF2      --------->TOE2(3)------>ZmHOX2a(2)               <---------ARR11(3)    --------->ANAC58   tctcacaatgttattgccttattgtgattcagatcttcatttttgtttttgttttttcgataatcgatcttcatttttgttatgaacaagacaaattgga  16341200                                             --------->ATHB12                                             <---------ICU4                                            --------->ICU4                                            <---------YAB1                                          --------->YAB1                                         <---------YAB1                                 ----------->GT1                                --------->DAG2                               ---------->DOF2                            <---------AHL20(2)                    --------->YAB1                            --------->AHL20(2)                   <---------ATHB12     <----------DOF2                     --------->ANAC58  --------->YAB1     --------->YAB1    --------->YAB1                     --------->ANAC58 --------->ICU4      <---------ICU4    <--------ATHB1 --------DOF2      ---------->DOF2  ---------->DOF2      --------->ICU4    <---------ATHB51   <------   ctttgagttattttctcagggcaaagcaaattaaaaagtaaagatgataattgagtctaattatcaaatgataaacaataatacttctcttttttttaac  16341300    ------>MYB46(1)    ------>MYB83   <---------ALFIN1                     <---------RVE1(1)  --------->MYB46(3)                    <---------CCA1(1)  <---------MYB55(2)                   <---------ARR11(3) --------->ANAC58                      --------->ARR11(3)                                          -- --------->ANAC58    <---------AHL20(1)<---------GLK1(2)                            <----------DOF2<- -----GT1      --------->YAB1  <----------DOF2            --------->ANAC46  <----------DOF2 <--------   ctcacccactgaatttctcataatatgtttcttctttcaaagattttttgagccttgttttcgcaacgatacaatttcctttcggtctttggatttattt  16341400  Previous    Next  AGI:  At5g40780.1    Description:  LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transmembrane transporter. similar to LHT2 (LYSINE HISTIDINE TRANSPORTER 2), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G24400.1); similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G67640.1); similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G48640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46653.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46673.1); similar to histidine amino acid transporter [Oryza sativa (indica cultivar-group)] (GB:CAD898 Range:  from: 16340879    to: 16344509    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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