Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------TGA1                                                           ------>NtERF2                                                           <---------DEAR3(2)                                                          <---------DEAR3(1)                                                         --------->TGA2(2)                ------>NtERF2                                                       --------->O2                       --------->LBD16                                                       <---------O2             <-------TEIL                                                       --------->TGA1a        <---------GLK1(2)               ----------->GT1                    ---------->DOF2<-----------HVH21       <---------LBD16          <----------DOF2                         ===============bZIP_DOF     <---------ARR14(2)     <-----------HVH21                       <---------ATHB12   --------->bZIP60(2)     <---------LBD16 ---GLK1(2)  <---------ANAC58       <------ZmHOX2a(2)  <---------TGA1a   --------->ARR14(2) ->At4g35610 <---------ANAC46   --------->SPL7--------->YAB1<------NtERF2<---------ARR14(2) --At4g35610 <---------ANAC58 --------->TOE1(2) <---------YAB1 <------NtERF2  --------->ARR14(2)   ctctagtcgtcactttcttgtaaaacctcttccctacgatcgaaccagtcatgaaagacgtcggcatcgtcactgaatccgattcgtttttccggcgaga  16302200                                                                           <---------ARR14(2)                                                                           --------->MYB52(1)                                                                           --------->ARR14(2)   -----                                                                   <---------MYB46(3)   --------->WRKY12                                                            --------->GLK1(2)           ----------->HVH21                                                           <---------GLK1(2)     <---------ARR14(2)                                                           <---------ARR14(2)    --------->GLK1(2)                                                           --------->ARR14(2)    --------->ARR14(2)                                                          <---------HSFC1(2)    <---------GLK1(2)   <                                                    ------>NtERF2<---------MYB52(1)    <--------P<---                                     --------->HSFB2a(2)  --------->HSFC1(2)<-----------------------TaNAC69(2)                                     --------->HSFC1(1)   <---------HSFB2a(1)   --------->ARR14(2)  -         --------->ZAT6              <---------HSFB2a(2)  --------->HSFB2a(1)   <---------ARR14(2)<--      <----------DOF2<---------GLK1(1)             --------->DEAR3(1)      --------->GLK1(2)  -------   gttcggagctttcactaagatgggtttctcattttccttctcgaatgtgaacgacgacgaagattccgatggctgagtatcggaatcgggttgacgagcg  16302300                                                                                  <------NtERF2                                                                                 ------>NtERF2                                                                                --------->RRTF1(3)                  ------>ZmHOX2a(2)                                             --------->RRTF1(2)                --------->GLK1(2)                                               --------->RAP2.3(2)                --------->ARR11(3)                                              --------->RAP2.6(2)                <---------ARR11(3)                                              --------->DREB2C(2)                --------->ARR14(2)                                              --------->RAP2.3(3)      <---------SPL7                                                            <---------ATERF1(2)     <---------ANAC58                                                           --------->ANAC46     <---------ANAC58                                                           --------->DEAR3(1)     <---------ANAC46                                                           --------->ATERF1(2) ------>RAV1(1) <---------AGP1                               <---------ARR11(3)--------->RAP2.3(1) ---------At4g35610     --------->ANAC58                     --------->ARR11(3)--------->ERF1 ---NtERF2      <---------ARR14(2)                       ---------->DOF2       --------->ORA47(2) -------->At4g35610     --------->ANAC58           ------>NtERF2              <---------ATERF1(1) ---------RAV1(2)<------ZmHOX2a(2)                --------->WRKY12           --------->DEAR3(1)    <- -->At4g35610  <------ZmHOX2a(1)                <---------At4g35610     <-----------GT1     ------>ZmHOX2a(1)   gcagatgtcgtacataaggatctagcacgaatagcaagattagagtttctcgctgacttaaaagctcttccgattaacatcgccgccattaatcctccct  16302400                                                                        --------->O2                                                                        <---------DEAR3(1)                                                                        --------->bZIP60(1)                                                                        --------->bZIP60(2)                                                                        <---------bZIP60(2)                                                             --------->ANAC58                                                             --------->ANAC58                                                         --------->CCA1(2)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                        --------->AGP1  --------->TGA1a      ----------------->AGL1                           <---------At4g35610   ----------->TGA1                                    --------->At4g35610   ----------->HVH21                               <-----------HVH21    <---------bZIP60(1)       <-- --------->At4g35610      <---------ANAC58        ------>ZmHOX2a(2)     <---------TGA1a   <---------ZAT6 <---------At4g35610      <---------ANAC46      --------->ARR11(3)      <---------O2  --------->LBD16 --------->LBD16          <---------ANAC58      <---------ARR11(3)   --------->ANAC46--------->ANAC46 --------LBD16  <---------PCF5          <------ZmHOX2a(2)<------ZmHOX2a(2)          <---------LBD16   ctccggtgacgaaaatggggacctccttgcttagggttttagatcacatagatcgtcagatccaagcctaaacgacgtcgcaataacccggagtgatagt  16302500                                       --------->YAB1                                       <---------ICU4                                      <---------YAB1                                <---------AHL20(1)                                    --------->YAB1                                  <---------AHL20(2)                                   --------->ICU4--------->AHL20(2)                --------->YAB1                                   <---------YAB1<---------AHL20(2)              --------->AHL20(2)                                <---------YAB1  --------->AHL20(2)               --------->AHL20(1)                              --------->YAB1<---------YAB1                       <---------AHL20(1)                           <---------ICU4 --------->YAB1               <---------At4g35610                          <---------YAB1  <-----------GT1              --------->ZAT2 --------->TOE2(3)      --------->YAB1--------->ICU4  *TSS             --------->At4g35610  --------- -------DOF5.7(2)      <---------YAB1<---------AHL20(2)      <------------CBF    <---------AHL20(2)<-   taacctctactacaatgaaggtgttttgataattgtgattataattacaattttattctatctcattgtaatcagctctgtaatataatatttgtaaaga  16302600                                               <------------CBF                                             --------->AHL20(1)                                             <---------AHL20(2)            <---------YAB1                  <---------AHL20(2)           --------->ARR11(3)      <----------DOF2           <---------ARR11(3)   --------->GLK1(2) ->DOF2   --------->YAB1     ------------>CBF--------->AHL20(2)                --------->YAB1 --------AHL20(2)     <-----------TBP       --------->AHL20(2)         <----------DOF2              -   attttttgacaaatatcatttgggttatatagacaatcttttttaaaaaaattggctaaatttagtttgtaaacttttctataattttcaagagttacac  16302700                                                                               --------->AHL20(2)                                                                               --------->AHL20(1)                                                                               <---------AHL20(2)                                                                              --------->AHL20(2)                                                                         --------->AHL20(2)                                                                       ----------->GT1                                              --------->AHL20(2)<---------------AGL15                                          <---------AHL20(2)    ----------------->AG                                    <---------MYB52(1)          --------------->AGL15                                   --------->LBD16             ----------------->AGL2                    --------->ANAC55(2)  --------->AHL20(2)    <-----------------AGL1             <---------ANAC55(2)  <---------ANAC55(2)          ----------------->AGL1             --------->ANAC55(2)  --------->TOE2(3)            <-----------------AG       --------->AHL20(2)         ----------->GT1  ---------->DOF2     <---------ANAC55(2)      ----- -------->REM1(1)   <---------ANAC55(2)  <---------AHL20(2)    ----------------->AG<-----------GT1   ttacaccaattcattatgtgatatgtattgtttcatccgtaaattaaataaactaaagtattcttacccaaataagtaaattttattactctaaatccaa  16302800                                                                                        --------->DEAR3(1)                                                                                        --------->ATERF1(2)                                                                                        --------->ANAC46                                                                                        <---------ATERF1(2)                                                                                       --------->MYB46(3)                                                                                       --------->ATERF1(1)                                                                                       --------->ERF1                                                                                      <---------At4g35610                           --------->LBD16                                            --------->At4g35610                          --------->LBD16                                     <------NtERF2                 <XXXXXXXXXXXXXXXXXXXXMIR2111A*                          --------->ANAC58 --------->ATERF1(1)            --------->ANAC55(2)                                          --------->ANAC58 <------NtERF2          <---------AHL20(2)               --------->LBD16               --------->ANAC46<---------ATERF1(1)   ----------->GT1------>ZmHOX2a(2)      ------>ZmHOX2a(2)              --------->RAP2.6(3) <-------- ----->DOF2 <---------ANAC55(2)  --------->AHL20(2)                    --------->MYB52(1)------>NtERF2   aagttttgttaattaagtgatccgagtcccgagaaaaaaatgatccgagtcaaaaatgctgaaacttaactcaaaacggcatcgttttagccgccggttt  16302900                              --------->ZAT18                                           <------ZmHOX2a(2)                      --------->TOE1(3)                                         --------->ANAC58                      <---------------AGL15                                     --------->ANAC46                --------->ANAC58       <-------TEIL                             --------->ANAC58                --------->ANAC58----------->RAV1(1)                       --------->MYB46(3)                <---------ANAC55(2)  --------->ARR14(2)                  --------->ANAC46------>ZmHOX2a(2)                --------->ANAC55(2)  <---------GLK1(2)          --------->At4g35610    <---------ARR11(3)      ---------->DOF2 --------->TOE2(3)*TSS              --------->AHL20(2) <-----------HVH21   --------->TOE2(3)  --------->YAB1 <---------ARR14(2)  <---------AHL20(2)--------->ANAC46   <----------DOF2    --------------->AGL15         <-------TEIL<---------At4g35610    --------->ARR11(3)   --------->TOE1(3) ----------------->AGL3     --------->DAG2<-----------GT1<---------ATHB12 -DEAR3(2)---------->DOF2---------->DOF2      --------->CCA1(2) ----------->RAV1(2)  ----------->ARR10   caaaactttaaagaaagaacgtaaccataaagagcgccagattcagagataaggctcattaaaatcacctgcttcacccatcacgctaagatcgtggaat  16303000                               --------->TGA2(2)                              <-----------TGA1                             --------->ANAC58                             <---------O2                             --------->TGA1a                             <---------TGA1a                             --------->ANAC55(1)                             --------->ANAC55(2)                             --------->O2                             --------->ANAC58                             --------->ANAC46                                                --------                             <---------ANAC55(2)                                             --------                             --------->bZIP60(2)                                             <-------                      --------->YAB1                                                      --------->YAB1                      <---------ICU4                                                      --------->AHL20(2)                 <---------HSFB2a(2)                                                     <---------ATHB12                 --------->HSFB2a(2)                    --------->ATHB51                 <---------ATHB51          <---------GLK1(2) <-----------STF1  <---------YAB1                         --------->LBD16        --------->ZAT14     <-----------bZIP910(1)      <---------ICU4           --------->ANAC46    <-----------GT1  <------ZmHOX2a(2)      <---------ICU4               <---------AHL20(2)  <-------    --------->ZAT6  --------->ARR11(3)      --------->YAB1 --------->AHL20(2)  <-----------GT1  <---- <---------CCA1(2)  <---------ARR11(3)     --------->ICU4  <---------AHL20(2)<-----------GT1 <-------   cttatatcactagactctcccagatcatgacacgtcatcatcttcatcatgagacccataattttttgaaactgttttatttcactccccaataatattt  16303100  Previous    Next  AGI:  At5g40660.1    Description:  ATP12 protein-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO14638.1); contains InterPro domain ATP12 ATPase (InterPro:IPR011419) Range:  from: 16300736    to: 16302554    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g40670.1    Description:  PQ-loop repeat family protein / transmembrane family protein. Identical to Cystinosin homolog [Arabidopsis Thaliana] (GB:P57758); similar to unknown [Populus trichocarpa] (GB:ABK94508.1); contains InterPro domain Lysosomal cystine transporter (InterPro:IPR005282); contains InterPro domain Cystinosin/ERS1p repeat (InterPro:IPR006603) Range:  from: 16302939    to: 16305021    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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