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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
TGA1
------>
NtERF2
<---------
DEAR3(2)
<---------
DEAR3(1)
--------->
TGA2(2)
------>
NtERF2
--------->
O2
--------->
LBD16
<---------
O2
<-------
TEIL
--------->
TGA1a
<---------
GLK1(2)
----------->
GT1
---------->
DOF2
<-----------
HVH21
<---------
LBD16
<----------
DOF2
===============
bZIP_DOF
<---------
ARR14(2)
<-----------
HVH21
<---------
ATHB12
--------->
bZIP60(2)
<---------
LBD16
---
GLK1(2)
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
TGA1a
--------->
ARR14(2)
->
At4g35610
<---------
ANAC46
--------->
SPL7
--------->
YAB1
<------
NtERF2
<---------
ARR14(2)
--
At4g35610
<---------
ANAC58
--------->
TOE1(2)
<---------
YAB1
<------
NtERF2
--------->
ARR14(2)
ctctagtcgtcactttcttgtaaaacctcttccctacgatcgaaccagtcatgaaagacgtcggcatcgtcactgaatccgattcgtttttccggcgaga
16302200
<---------
ARR14(2)
--------->
MYB52(1)
--------->
ARR14(2)
-----
<---------
MYB46(3)
--------->
WRKY12
--------->
GLK1(2)
----------->
HVH21
<---------
GLK1(2)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
GLK1(2)
--------->
ARR14(2)
--------->
ARR14(2)
<---------
HSFC1(2)
<---------
GLK1(2)
<
------>
NtERF2
<---------
MYB52(1)
<--------
P
<---
--------->
HSFB2a(2)
--------->
HSFC1(2)
<-----------------------
TaNAC69(2)
--------->
HSFC1(1)
<---------
HSFB2a(1)
--------->
ARR14(2)
-
--------->
ZAT6
<---------
HSFB2a(2)
--------->
HSFB2a(1)
<---------
ARR14(2)
<--
<----------
DOF2
<---------
GLK1(1)
--------->
DEAR3(1)
--------->
GLK1(2)
-------
gttcggagctttcactaagatgggtttctcattttccttctcgaatgtgaacgacgacgaagattccgatggctgagtatcggaatcgggttgacgagcg
16302300
<------
NtERF2
------>
NtERF2
--------->
RRTF1(3)
------>
ZmHOX2a(2)
--------->
RRTF1(2)
--------->
GLK1(2)
--------->
RAP2.3(2)
--------->
ARR11(3)
--------->
RAP2.6(2)
<---------
ARR11(3)
--------->
DREB2C(2)
--------->
ARR14(2)
--------->
RAP2.3(3)
<---------
SPL7
<---------
ATERF1(2)
<---------
ANAC58
--------->
ANAC46
<---------
ANAC58
--------->
DEAR3(1)
<---------
ANAC46
--------->
ATERF1(2)
------>
RAV1(1)
<---------
AGP1
<---------
ARR11(3)
--------->
RAP2.3(1)
---------
At4g35610
--------->
ANAC58
--------->
ARR11(3)
--------->
ERF1
---
NtERF2
<---------
ARR14(2)
---------->
DOF2
--------->
ORA47(2)
-------->
At4g35610
--------->
ANAC58
------>
NtERF2
<---------
ATERF1(1)
---------
RAV1(2)
<------
ZmHOX2a(2)
--------->
WRKY12
--------->
DEAR3(1)
<-
-->
At4g35610
<------
ZmHOX2a(1)
<---------
At4g35610
<-----------
GT1
------>
ZmHOX2a(1)
gcagatgtcgtacataaggatctagcacgaatagcaagattagagtttctcgctgacttaaaagctcttccgattaacatcgccgccat
taatcctccct
16302400
--------->
O2
<---------
DEAR3(1)
--------->
bZIP60(1)
--------->
bZIP60(2)
<---------
bZIP60(2)
--------->
ANAC58
--------->
ANAC58
--------->
CCA1(2)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
AGP1
--------->
TGA1a
----------------->
AGL1
<---------
At4g35610
----------->
TGA1
--------->
At4g35610
----------->
HVH21
<-----------
HVH21
<---------
bZIP60(1)
<--
--------->
At4g35610
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
TGA1a
<---------
ZAT6
<---------
At4g35610
<---------
ANAC46
--------->
ARR11(3)
<---------
O2
--------->
LBD16
--------->
LBD16
<---------
ANAC58
<---------
ARR11(3)
--------->
ANAC46
--------->
ANAC46
--------
LBD16
<---------
PCF5
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
LBD16
ctccggtgacgaaaatggggacctccttgcttagggttttagatcacatagatcgtcagatccaagcctaaacgacgtcgcaataacccggagtgatagt
16302500
--------->
YAB1
<---------
ICU4
<---------
YAB1
<---------
AHL20(1)
--------->
YAB1
<---------
AHL20(2)
--------->
ICU4
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
<---------
YAB1
<---------
AHL20(1)
<---------
ICU4
--------->
YAB1
<---------
At4g35610
<---------
YAB1
<-----------
GT1
--------->
ZAT2
--------->
TOE2(3)
--------->
YAB1
--------->
ICU4
*
TSS
--------->
At4g35610
---------
-------
DOF5.7(2)
<---------
YAB1
<---------
AHL20(2)
<------------
CBF
<---------
AHL20(2)
<-
taacctctactacaatgaaggtgttttgataattgtgattataattacaatttt
attctatctcattgtaatcagctctgtaatataatatttgtaaaga
16302600
<------------
CBF
--------->
AHL20(1)
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
ARR11(3)
<----------
DOF2
<---------
ARR11(3)
--------->
GLK1(2)
->
DOF2
--------->
YAB1
------------>
CBF
--------->
AHL20(2)
--------->
YAB1
--------
AHL20(2)
<-----------
TBP
--------->
AHL20(2)
<----------
DOF2
-
attttttgacaaatatcatttgggttatatagacaatcttttttaaaaaaattggctaaatttagtttgtaaacttttctataattttcaagagttacac
16302700
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
----------->
GT1
--------->
AHL20(2)
<---------------
AGL15
<---------
AHL20(2)
----------------->
AG
<---------
MYB52(1)
--------------->
AGL15
--------->
LBD16
----------------->
AGL2
--------->
ANAC55(2)
--------->
AHL20(2)
<-----------------
AGL1
<---------
ANAC55(2)
<---------
ANAC55(2)
----------------->
AGL1
--------->
ANAC55(2)
--------->
TOE2(3)
<-----------------
AG
--------->
AHL20(2)
----------->
GT1
---------->
DOF2
<---------
ANAC55(2)
-----
-------->
REM1(1)
<---------
ANAC55(2)
<---------
AHL20(2)
----------------->
AG
<-----------
GT1
ttacaccaattcattatgtgatatgtattgtttcatccgtaaattaaataaactaaagtattcttacccaaataagtaaattttattactctaaatccaa
16302800
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
ANAC46
<---------
ATERF1(2)
--------->
MYB46(3)
--------->
ATERF1(1)
--------->
ERF1
<---------
At4g35610
--------->
LBD16
--------->
At4g35610
--------->
LBD16
<------
NtERF2
<XXXXXXXXXXXXXXXXXXXX
MIR2111A*
--------->
ANAC58
--------->
ATERF1(1)
--------->
ANAC55(2)
--------->
ANAC58
<------
NtERF2
<---------
AHL20(2)
--------->
LBD16
--------->
ANAC46
<---------
ATERF1(1)
----------->
GT1
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
--------->
RAP2.6(3)
<--------
----->
DOF2
<---------
ANAC55(2)
--------->
AHL20(2)
--------->
MYB52(1)
------>
NtERF2
aagttttgttaattaagtgatccgagtcccgagaaaaaaatgatccgagtcaaaaatgctgaaacttaactcaaaacggcatcgttttagccgccggttt
16302900
--------->
ZAT18
<------
ZmHOX2a(2)
--------->
TOE1(3)
--------->
ANAC58
<---------------
AGL15
--------->
ANAC46
--------->
ANAC58
<-------
TEIL
--------->
ANAC58
--------->
ANAC58
----------->
RAV1(1)
--------->
MYB46(3)
<---------
ANAC55(2)
--------->
ARR14(2)
--------->
ANAC46
------>
ZmHOX2a(2)
--------->
ANAC55(2)
<---------
GLK1(2)
--------->
At4g35610
<---------
ARR11(3)
---------->
DOF2
--------->
TOE2(3)
*
TSS
--------->
AHL20(2)
<-----------
HVH21
--------->
TOE2(3)
--------->
YAB1
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ANAC46
<----------
DOF2
--------------->
AGL15
<-------
TEIL
<---------
At4g35610
--------->
ARR11(3)
--------->
TOE1(3)
----------------->
AGL3
--------->
DAG2
<-----------
GT1
<---------
ATHB12
-
DEAR3(2)
---------->
DOF2
---------->
DOF2
--------->
CCA1(2)
----------->
RAV1(2)
----------->
ARR10
caaaactttaaagaaagaacgtaaccataaagagcgcc
agattcagagataaggctcattaaaatcacctgcttcacccatcacgctaagatcgtggaat
16303000
--------->
TGA2(2)
<-----------
TGA1
--------->
ANAC58
<---------
O2
--------->
TGA1a
<---------
TGA1a
--------->
ANAC55(1)
--------->
ANAC55(2)
--------->
O2
--------->
ANAC58
--------->
ANAC46
--------
<---------
ANAC55(2)
--------
--------->
bZIP60(2)
<-------
--------->
YAB1
--------->
YAB1
<---------
ICU4
--------->
AHL20(2)
<---------
HSFB2a(2)
<---------
ATHB12
--------->
HSFB2a(2)
--------->
ATHB51
<---------
ATHB51
<---------
GLK1(2)
<-----------
STF1
<---------
YAB1
--------->
LBD16
--------->
ZAT14
<-----------
bZIP910(1)
<---------
ICU4
--------->
ANAC46
<-----------
GT1
<------
ZmHOX2a(2)
<---------
ICU4
<---------
AHL20(2)
<-------
--------->
ZAT6
--------->
ARR11(3)
--------->
YAB1
--------->
AHL20(2)
<-----------
GT1
<----
<---------
CCA1(2)
<---------
ARR11(3)
--------->
ICU4
<---------
AHL20(2)
<-----------
GT1
<-------
cttatatcactagactctcccagatcatgacacgtcatcatcttcatcatgagacccataattttttgaaactgttttatttcactccccaataatattt
16303100
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AGI:
At5g40660.1
Description:
ATP12 protein-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO14638.1); contains InterPro domain ATP12 ATPase (InterPro:IPR011419)
Range:
from: 16300736
to: 16302554
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g40670.1
Description:
PQ-loop repeat family protein / transmembrane family protein. Identical to Cystinosin homolog [Arabidopsis Thaliana] (GB:P57758); similar to unknown [Populus trichocarpa] (GB:ABK94508.1); contains InterPro domain Lysosomal cystine transporter (InterPro:IPR005282); contains InterPro domain Cystinosin/ERS1p repeat (InterPro:IPR006603)
Range:
from: 16302939
to: 16305021
Orientation: Forward
Links:
TAIR
MIPS
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when using AthaMap.
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