Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     ------>NtERF2 ---ARR10 -ARR14(3) >ARR14(3) -ARR14(2)            ---------->DOF2             <----------DOF2              ---------->ID1 >ARR14(2)        <---------ANAC46               ------>ZmHOX2a(2)         <---------ANAC58 -ARR11(3)      ----------->GT1        --------->TOE1(2)  --------->ANAC46 <---------ANAC58 -AGP1 --------->AtLEC2     <-------TEIL       --------->ARR11(3)--------->ANAC58                   *TSS >ARR11(3)    <---------GLK1(2)  --------->YAB1<---------ARR11(3)--------->ANAC58     <----------DOF2   accgatgccattcaaagattgtgtaaaagatgcaaacagaacatgagatgatctttcttcaaacaacaagaaaacttgtttgtcttctcttttagttttt  16298200                                                                                             <-------                                                                                           -------->ATHB1                                                                                           <---------AHL20(2)                                                                                           <---------ICU4                                                                                           --------->ATHB12                                                                                           -------->HAHB4                                                                                           --------->ATHB51                                                                                          <---------ATHB51                                                                                          <---------YAB1                                                                                          --------->ICU4                    <---------ANAC58                                                   --------->AHL20(2)                    <---------ANAC55(2)                             --------->AHL20(2) <---------AHL20(2)                    <---------ANAC55(1)                             <---------AHL20(2) <---------YAB1                    <---------ANAC46                          ---------->DOF2         --------->AHL20(2)                    <---------YAB1                          <---------HSFB2a(2)  <---------TOE2(3)              <---------YAB1                                --------->HSFB2a(2)  <---------TOE1(3)           --------->GLK1(2)    --------->YAB1       <---------ANAC58         --------->DOF5.7(2)      ---------->DOF2    ---------->DOF2             <---------ANAC58      <---------TOE2(3)<--------  --------->TOE2(3) <---------ANAC58            <---------GLK1(2)----------->GT1<---------DOF5.7(2)   gttttcttaaaagaatttgattacgtttaaagaattagaatttgagaacagattagcgttttctgaaagtttaaatataggttaacgttttaattattgt  16298300                                                     --------->TOE1(1)                                                     --------->TOE2(1)                                                    --------->HSFB2a(2)                                                    <---------HSFB2a(2)                                              <----------DOF2                                       <                                              <---------DAG2                                        <                                           --------->ANAC58                 <---------ZAT14       <--                                      --------->ANAC46        <----------DOF2             --------->YAB1                                      --------->ANAC58   --------->DEAR3(2) --------->ZAT14      ----                       <---------ATHB12    --------->ANAC58   ======================================= --YAB1               ------>MYB83  --------->MYB52(1)  --------->SPL7      --------->ZAT18      ---- ----CBF              ------>MYB46(1) --------->ANAC58<---------SPL7        <---------ZAT18      ----   tgaaacttgaaaacagaaaacaccaatcttttgtagcgaaacggaacgctttttctcgtaccgtcttttgttttcgagtgaacttcatcgtatcaaaact  16298400           <---------ALFIN1          <---------REM1(2)        ------>ZmHOX2a(2)      <---------ARR11(3)   ------->MYC3   <-------MYC3   ------->PIF5   <-------PIF5   ------->MYC2   <-------MYC2  --------->ANAC58  --------->ANAC58  --------->ANAC46  <---------ANAC55(2)               <----------DOF2  --------->O2                   --------->ANAC58  --------->ANAC55(2)            --------->ANAC58  =============================================bZIP_DOF  --------->TGA1a                --------->ANAC46  <---------TGA1a               ------->MYC2  <---------O2                  <-------MYC2  --------->bZIP60(2)           ------->MYC3 ------>NtERF2                  <-------MYC3 ---------ALFIN1               --------->ANAC58                                  <---------MYB52(1) ------------OsbHLH66          --------->ANAC58                                 <---------RAP2.6(3) ---------------PIF3(1)     --------->ARR14(2)                                  ----------->GT1 ----->ANAC58      --------->HSFB2a(2)                                          --------->LBD16 ===========bZIP_DOF        <---------ARR14(2)                              --------->ANAC46  <------ ----->ANAC58      <---------HSFB2a(2)                                    ---------->DOF2 --------->MYB52(1) ----->ANAC46<---------ALFIN1<---------ALFIN1                       <-----------GT1   --------->YAB1   cgccacgtgatctacacacttctcgaggcgaacacgcgcatttcagaacttatccattaatctctgtgattaacctataagccggtatttataaacggtc  16298500                                                                                                   --                                                                                                  ---                                                                                              <------                                                                                              <------                                  <---------ANAC46                                            -------                                  --------->ANAC55(2)                                         -------                                  <---------ANAC55(2)                                      --------->YAB1                                  <---------ANAC58                                         <--------ATHB1                             <---------ICU4                                                <---------ICU4                            <---------MYB52(1)                                             --------->ATHB51                            --------->ICU4                         --------->ANAC55(2)     <--------HAHB4                           <-------GAMYB                           <---------ANAC55(1)     -------->HAHB4                          --------->MYB52(2)                       <---------ANAC46       <---------YAB1                          ----------->GT1                          <---------ANAC55(2)    --------->AHL20(2)                          <---------MYB46(3)    --------->ANAC58  <-------TEIL            <---------ATHB51                       ------->GAMYB            --------->ANAC58<---------ARR14(2)        --------->ICU4                      --------->MYB46(3)   ------->TEIL         --------->ARR14(2)   --------->ANAC55(2)                    --------->MYB52(1)  --------->ANAC46     ----------->TBP       <-----------GT1<-- -----HVH21    <---------AHL20(2) <---------ANAC58   <---------ALFIN1       <-------TEIL--------->YAB1   acgattttccaagttttttaatcaacggtcgttattacgtagacgaagctaagcctcacatctacaaatacgtatacatacatttttacataataattaa  16298600         ----------->GT1     <-----------GT1  --------->ATHB51  <--------HAHB4  -------->HAHB4  <---------ICU4                 <---------AHL20(2)  <--------ATHB1                *TSS  --------->YAB1             <---------YAB1                                                     <<<<< <---------YAB1              --------->ICU4                                                    <----- <---------ATHB51          <--------HAHB4                                                     <------ --------->ICU4            <---------ICU4                                                    <------- --------->AHL20(2)        --------->YAB1                                                   <-------- ------->YAB1             <---------ATHB12                                                  <-------GAMYB ------>AHL20(2)        --------->WOX13(1)                                                <---------ANAC46 ---AHL20(2)            <-----------GT1                                                   <---------ANAC58 ---AHL20(1)           --------->AHL20(2)    <---------AHL20(2)                           <---------ANAC58 -->AHL20(1)           <---------AHL20(2)    --------->AHL20(2)                 <---------HSFB2a(2) -->AHL20(2)          --------->AHL20(2)    --------->AHL20(2)                  --------->HSFB2a(2) -------AHL20(2)<-----------GT1 --------->AHL20(2)                              --------->LBD16<-----   ttaataattacaggttattaacaaattaatcatttttaatagactattaaaaaaacaatttcatttcatttgctctcttctccgagaaaatggcgtttgg  16298700                                                    <---------WOX13(1)                                                 <------NtERF2                                                ------>NtERF2                                               <---------ANAC46                                              <------NtERF2                                              --------->ATERF1(1)                                              --------->RAP2.3(1)                                             <---------DEAR4(2)                                             <---------RRTF1(1)                                             <---------ERF1                                             <---------RAP2.6(1)                                             ------>NtERF2  <---------RAP2.3(1)                                             <---------ORA47(2)                                             <---------DEAR3(2)                                             <---------RAP2.3(1)                                            <---------RRTF1(3)                                            <---------RAP2.3(3)                                            <---------RRTF1(2)                                            --------->DEAR3(1)                                            <---------RAP2.3(2)   ------>ZmHOX2a(2)                        <---------DEAR3(1) <<<<<MYB80               <---------ICU4   <---------ABI4(1)--------->LBD16 -MYB46(1)                --------->YAB1  <---------ATERF1(1)  ------>NtERF2 ---AtMYB61              <---------ATHB12<---------DEAR3(1) ------>NtERF2 --MYB55(1)            ------>MYB46(1)   --------->ANAC46  <---------RAP2.3(2)       --------->At4g35610 -MYB52(1)             ------>MYB83     <---------LBD16   <---------LBD16         <------ZmHOX2a(2) -MYB83     <---------MYB46(3) <---------YAB1<---------ATERF1(1)<------NtERF2   <------ZmHOX2a(1)----   tttgatcggaagagttgttggaaccaaatcatcacgattatccacggcggcgcgattgattccggcgcgatggacatcaacaggatcagaagcacaatcg  16298800                   ===============================HOX2a_HOX2a                   <------ZmHOX2a(1)                   ================================HOX2a_HOX2a                 --------->ALFIN1                --------->ATERF1(1)                <------NtERF2              <---------ANAC46              <---------DEAR3(1)              --------->ALFIN1             <---------LBD16             <---------At4g35610             <------NtERF2             <---------ABI4(1)             --------->At4g35610             --------->ATERF1(1)            <---------ORA47(2)            <---------DEAR4(2)            <---------RRTF1(1)            <---------ATERF1(1)            <---------RAP2.6(1)            <---------RAP2.3(1)            ------>NtERF2           <---------RAP2.3(3)           --------->ATERF1(2)           <---------RRTF1(3)           <---------RAP2.3(2)                                           --------->ANAC58           <---------ATERF1(2)              ===============================HOX2a_HOX2a           <---------RRTF1(2)               ------>ZmHOX2a(2)            --------->ANAC58           <---------DEAR3(1)              <------ZmHOX2a(2)           ---------->DOF2           --------->DEAR3(1)              ================================HOX2a_HOX2a          --------->ATERF1(1)             --------->ARR11(3)        --------->LBD16          <---------ABI4(1)               <---------AGP1            ------>ZmHOX2a(1)         <---------ATERF1(1)              --------->ARR14(2)        <---------HSFB2a(2)        --------->DEAR3(1)                --------->AGP1            --------->HSFB2a(2)        ------->GAMYB                     <---------ARR14(2)       <---------LBD16       --------->DEAR3(2)                 <---------ARR11(3) <---------ARR11(3)       --------->MYB46(3)                <---------CCA1(2)   <---------GLK1(2)         <---------ICU4 ------>DOF2<---------ERF1           <-----------HVH21     --------->LBD16     <---------ARR11(3)   aaagcttcaaccggcggcggaggagcgagtctgaagacgtttcagatctatcgatggaatccagataatcctggaaagccagagcttcaagattacaaaa  16298900                                                                             <---------ANAC58   -----                                          <---------TOE1(3)                  --------->ANAC46   <----                                    <---------YAB1                       <---------DAG2    ----------                                  <----------DOF2             ------>ZmHOX2a(2)           --------->LBD16                           <---------HSFB2a(2)                <-------TEIL   <---------ANAC58 <------                           <---------HSFC1(1)                <------ZmHOX2a(2)           <---------ANAC46                           --------->HSFB2a(2)              <---------ARR14(2)           <---------ANAC58                           >>>>>>>ZML2    <---------TOE2(3) ------->TEIL <----------DOF2 <---------ANAC58  ------>ZmHOX2a(2)  <---------ATHB12     <---------YAB1    --------->ARR14(2)--------->LBD16 <------   tcgatctcaaggattgtggtccaatggttctagatgctttgattaagattaagaacgagatggatccatcgctcactttccgtcgctcttgccgtgaagg  16299000                                                                                                   --        <---------ANAC58                                                 ---------->DOF2           --        <---------ANAC46                                               ------>ZmHOX2a(2)          <--       <-------TEIL                                                  <---------ARR11(3)           ---    <---------MYB46(3)                                               <---------AGP1           <------ ---->ARR11(3)      <---------YAB1          <---------ANAC58         --------->ARR14(2)       ------- -----ARR11(3)      ------->TEIL            <---------ANAC46   --------->ARR14(2)            <-------GAMYB ->HVH21<---------ANAC58              --------->ARR11(3)       <---------ARR14(2)     --------->ARR14(2) ---TOE1(3)--------->ZAT18    ------->TEIL  <---------ANAC58   ------->TEIL   --------->CCA1(2)  <--- ---TOE2(3)<---------ZAT18 <---------WOX13(1)       <---------TOE2(3)<---------ARR14(2)  --------->ANAC46   tatttgtggttcgtgtgctatgaacattgatggatgtaatggtcttgcttgtttaacgaagattgaatctggatctaaagagacgacgattacgccgttg  16299100  Previous    Next  AGI:  At5g40645.1    Description:  nitrate-responsive NOI protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35655.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64176.1); contains InterPro domain Nitrate-induced NOI (InterPro:IPR008700) Range:  from: 16297511    to: 16298200    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g40650.1    Description:  SDH2-2 (succinate dehydrogenase 2-2). Identical to Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial precursor (SDH2-2) [Arabidopsis Thaliana] (GB:Q8LB02;GB:Q9FM32;GB:Q9G3L9); similar to SDH2-1 (succinate dehydrogenase 2-1) [Arabidopsis thaliana] (TAIR:AT3G27380.2); similar to SDH2-1 (succinate dehydrogenase 2-1) [Arabidopsis thaliana] (TAIR:AT3G27380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14639.1); contains InterPro domain 2Fe-2S ferredoxin, iron-sulphur binding site; (InterPro:IPR006058); contains InterPro domain 4Fe-4S ferredoxin, iron-sulphur binding; (InterPro:IPR001450); contains InterPro Range:  from: 16298632    to: 16300755    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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