Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                           ----------                                                                                           ----------                                                                                          ===========                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                         ============                                                                                        --------->ARR14(2)                                                                           <---------------AGL15                                           <---------ICU4             <---------CCA1(2) <---------ARR14(2)                                           --------->YAB1           --------->YAB1      <---------ARR11(3)                                        --------->YAB1            -------->P            --------->ARR11(3)                                       <---------YAB1           --------->MYB46(3)  ---------->DOF2                                     <---------At4g35610     --------->YAB1==========================                        --------->MYB52(1)--------->ICU4    <---------ATHB12    ---------->DOF2   ttttgcagaaacaatgtttcaaaaaaaaacagagcattgagatgataatgacacaaacccaaatcatcaaccatatcatataaaaagaaagatcccaaat  16284200            ----------->RAV1(1)        <------ZmHOX2a(1)       --------->AtLEC2      --------->ALFIN1  --------->MYB52(2)    ------->GAMYB     --------->DOF5.7(2) --------->MYB52(1)   <---------MYB52(1)                                    --------->ANAC46 ------->AGL1        --------->TOE2(3)                       --------->ANAC46    <---------ALFIN1 ------->AG----------->HVH21 <---------YAB1                  --------->ANAC58  ----------->RAV1(1) ------->AGL3        --------->TOE1(3)        <---------ANAC58            --------->At4g35610 ==============HOX2a_HOX2a  <---------At5g28300              --------->ANAC58--------->At4g35610  <-- ==============HOX2a_HOX2a <-----------GT1    <---------ANAC58            <---------At4g35610   ----- ========MADS_MADS  ----------->GT1---------->DOF2   --------->ZAT18 --------->At4g35610--------->LBD16   ttgtaacggaggagcgacagaaacgttaattaccatggaaagaaggaagcttgagggcattagaagcaatgagcttagcagcaacacttccccaattgcc  16284300                                                                                        <------NtERF2                                                                                      <---------ANAC46               --------->TOE1(3)                                                      <---------DEAR3(1)               --------->TOE2(3)                                                     --------->ATERF1(1)      ------->GAMYB                                                                  <---------LBD16     <---------MYB52(2)                                                              <------NtERF2     --------->MYB46(3)                 --------->MYB46(3)                          <---------RAP2.3(1)     <---------MYB55(2)         <---------ICU4                  <---------HSFB2a(2)<---------RRTF1(3)     ----------->HVH21          --------->ATHB12            --------->GLK1(1)      <---------DEAR3(1)    ------>MYB83                --------->YAB1              <---------GLK1(1)      <---------RAP2.6(2)    ------>MYB46(1)             <--------HAHB4           <------NtERF2             <---------RAP2.3(2)   --------->MYB52(1)          <---------YAB1          <---------LBD16           --------->MYB52(1)  --------->AtMYB61            --------->ICU4          --------->ETT(1)   <------ZmHOX2a(1) --------->MYB46(3)          <---------ICU4       <---------ANAC58       --------->At4g35610     <--- -------MYB52(2)             --------->YAB1       <---------ANAC58     <-----------RAV1(2)      ----- ---->ZAT6 ----------->HVH21<---------ATHB12--------->AtMYB61   --------->HSFB2a(2)<---------RRTF1(2)   actaccaacgaccgtgaccttagatttcgaatcatcattacatccaccattgccttgtcgggatttctcgagagcaggagacatagcggcggagagagag  16284400                                                                     --------->ATHB12                                                                   <---------KAN4(2)                                                               >>>>>>>>>TBF1                                                         ======================HOX2a_HOX2a         <------ZmHOX2a(1)                               <------ZmHOX2a(1)                         -- --------->CCA1(2)                   ---------->DOF2  =========================HOX2a_HOX2a         == ---ZmHOX2a(1)        <------ZmHOX2a(1)               <------ZmHOX2a(1) ------>ZmHOX2a(2)      ------ ------>GT1  ---------->DOF2    --------->GLK1(2)--------->CCA1(2)--------->YAB1              <------   gagaaacgagaggaagaaagagaaggagagcgagaatgtgaaagggagaagatagaggaggagaagaagaatgatcggaagcgcatggaagatggagatt  16284500                                                                                     <------NtERF2<--                                                                                    ------>NtERF2----          <-------MYC3                                                              <---------RAP2.6(3)          ------->MYC3                                                             --------->RAP2.6(2)         <---------TGA1a                             --------->ZAT6                --------->RAP2.3(2)         <---------O2                              --------->MYB52(1)              --------->DEAR3(1)         --------->O2                     <---------ANAC58                         --------->RAP2.3(3)         --------->TGA1a                  <---------ANAC55(1)                      --------->ANAC46<- -------->DOF2  <---------ANAC46          <---------ANAC46                        *TSS           <--- ==================bZIP_DOF               <---------ANAC58                        --------->RAP2.3(1) --->CCA1(2)   <---------TOE2(3)      --------->DOF5.7(2)                        --------->At4g35610 ---ARR14(2) ----------->HVH21       --------->TOE2(3)                          --------->ANAC46 ----   tgaaaggggacacgtttgacgttgagagagagagagaaacgtttacgtggaagtaacagtagcagtgtcttcaattctctataagccgccatgtttcgat  16284600     ==================================HOX2a_HOX2a     ------>ZmHOX2a(2)     ===============================HOX2a_HOX2a   <---------ARR14(2)   --------->ARR11(3)   <---------AGP1                                                                         <----------DOF2   --------->ARR14(2)                                                                     --------->TOE2(3)   <---------ARR11(3)                                                                   <---------YAB1  <---------CCA1(2)                                                                    --------->ARR11(3) <------MYB83                                                                        <---------YAB1 <------MYB46(1)                                             <----------DOF2       <---------ICU4   < -----GAMYB --------->ARR14(2)                             ---------->ID1          --------->YAB1   - ----->ATHB12                ------>ZmHOX2a(1)     <---------DAG2                 <---------YAB1    - -------P   <---------ARR14(2)  ------>ZmHOX2a(1)  <----------DOF2                --------->ICU4   <- ------MYB46(3)          <-----------GT1      ------>ZmHOX2a(1)        <-----------GT1 <---------ARR11(3) ----->MYB55(2)   <----------DOF2       ------>ZmHOX2a(1) <-----------GT1      <---------MYB52(1)  --   ggttggatcttggcgatttgctctatgtttcctcctctcttcctaatcctctcctttttttttctttttttttttacttctgttattattatctttaaaa  16284700                                                                                           <---------ICU4                                                                                       ----------->GT1                                                                                      <---------WOX13(1)                                                     ------>ZmHOX2a(1)            --------->HSFB2a(2)          <---------AHL20(2)                        --------->TOE2(3)      <---------AHL20(1) --------->TOE2(3)                           --------->YAB1                --------->AHL20(1) ---------ICU4--------->AHL20(2)             <---------ICU4                <---------AHL20(2) -------->YAB1<---------AHL20(2)            --------->ICU4                --------->AHL20(2)    <---- -------->ATHB12     ----------->GT1     --------->AHL20(2)               --------->YAB1--------->YAB1 --------ATHB12  <---------YAB1          --------->AHL20(1)     --------->AtMYB61 <---------HSFB2a(2) ------->ICU4 <---------AHL20(1)         <---------AHL20(2) <---------ETT(1)<---------YAB1<---------YAB1   aatcattagtttttattttatttttgttaaaaacaaatatgaattaattatgttcctaaattccgaccaaaaacaattatatttctagattgataattgt  16284800                                            --------->TOE2(3)               <---------AHL20(2)           --------->TOE1(3)            <---------AHL20(2)             <---------ANAC55(2)            --------->AHL20(2)             <---------ANAC46        --------->AHL20(2)                 ----------->GT1        <---------AHL20(2)     --------->AHL20(2)                        ----------->GT1  <---------ANAC58          <---------HSFB2a(2)                         <---------MYB46(3)  <---------ANAC46   <---------TOE1(3)     --------->ANAC55(2)         <---------ANAC46  <---------ANAC58   <---------TOE2(3)<---------ZAT6                 --------->ATHB12 -----ZAT6<---------YAB1    --------->HSFB2a(2)                     <---------YAB1  <----------ID1   gttagcgtatttatttttatattgaggtttctataaattagtgtaacgtaaacttcataaatcgagatgtatgatgggtaaaaaaaaaaacaaaaaaaaa  16284900            <---------ANAC55(2)            --------->ANAC55(2)          <-----------GT1          --------->AHL20(2)                             --------->TOE2(3)            <---------ANAC55(2)       <---------ICU4                                   <---------ANAC55(2)      <---------ICU4       --------->ATHB51                                 ----------->GT1         --------->ICU4       <--------HAHB4                                   --------->ANAC55(2)     <---------YAB1      --------->ICU4                           <---------AHL20(2)             --------->YAB1   <-----    --------->YAB1               <---------AHL20(2)--------->YAB1--------->TOE2(3)  <---------AHL20(2)   <-------TEIL <---------AHL20(1)    <-----------GT1   <---------ANAC46     <---------ATHB12  <-----   cgagatgcataattacataatatttgtttttctattgaattttccatatgttattgtaacgtaaaattcttagttccaaatgataattacatgaattgtt  16285000                           --------->ANAC46                           --------->ANAC55(2)                                         --------->At4g35610                           --------->ANAC55(1)             ------>MYB46(1)       ---------->DOF2                           <---------ANAC55(2)             ------>MYB83        --------->AHL20(2)                    --------->HSFB2a(2)                  <---------MYB46(2)<---------AHL20(2)    --------->TOE1(2)   <---------ZAT14                  <---------MYB59   --------->AHL20(2)  <-------TEIL      <---------HSFB2a(2)               <-----------GT1     --------->AHL20(2) ----ANAC58         <---------HSFC1(1)   <---------HSFB2a(2)      XXXXXXXXXXXXXXXXXXXX>MIR865-5P ----ANAC58         --------->HSFC1(1)   --------->HSFB2a(2) --------->TOE2(3) <---------AHL20(2)   tgcatacatgggattcaaatttcgagaacacttaacattttttctataagtttgttttaccaaacttaaatttggatttaattaaaagcggatgacaaaa  16285100  Previous    Next  AGI:  At5g40610.1    Description:  glycerol-3-phosphate dehydrogenase (NAD+) / GPDH. Identical to Glycerol-3-phosphate dehydrogenase [NAD+], chloroplast precursor (DHAPRD) [Arabidopsis Thaliana] (GB:Q9SCX9;GB:Q8RXI6); similar to GLY1 (SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1), glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT2G40690.1); similar to Glycerol-3-phosphate dehydrogenase [NAD+] (GB:P52425); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; (InterPro:IPR011128); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); Range:  from: 16282089    to: 16284582    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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