Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <----------DOF2                                                                                   <---------DAG2                                                                                 ------>NtERF2                                                                               <------NtERF2                                                                              <---------DEAR4(2)                                                                              <---------RAP2.3(1)                                                                              <---------ORA47(2)                                                                              <---------ERF1                                                                              ------>NtERF2<---------HSFC1(2)                                                                              <---------RRTF1(1)                                --------->TOE2(3)                             <---------ATERF1(1)                                --------->TOE1(3)                            <---------RAP2.3(2)                              <---------ARR11(3)                             <---------RRTF1(3)                          ---------->DOF2               <---------MYB46(3)   <---------RAP2.3(3)                    ----------->GT1           --------->TOE1(2)              <---------DEAR3(1)               <---------------------WRI1 --------->WOX13(1)               --------->MYB52(1)      <-           --------->GLK1(2)  --------->ARR11(3)  --------->YAB1          ----------->HVH21--------->HSFC1(2)   ttacattgtagagaatgtgagatagaaacaaagaccttaaatatcaatccaacgatagtcgttccagtcttgagaaacgacggcgctttaagacccttct  16267600                                                   --------->At5g28300               <----------DOF2            <---------DAG2        <---------YAB1                  ------>MYB46(1)                                         <----      <---------CCA1(2)                 ------>MYB83        --------->ANAC46            <---------ALFIN1   <---------At4g35610                 <---------ALFIN1  --------->ETT(2)            <-----------GT1   --------->At4g35610         --------->At4g35610 <------NtERF2       ----------->RAV1(1)--------->ANAC46 ----------HVH21          <------ZmHOX2a(2)<----------DOF2 <---------LBD16    <-----------GT1   -----   gtgtcagcatatcattccttttgcacagatcgaagctaaacccaccttttggcggtatatcgacggaagactgcgacattttccgattcaccactctaca  16267700                                                                                                <----                                                                                                -----                --------->YAB1                                                              <--------                <---------ICU4                                                              ---------               <---------ATHB12                                                             ---------    <------ZmHOX2a(1)                                                                       <--------   <----------ID1                                                             --------->HSFB2a(2)   ----------->GT1                                         ------->TEIL       <---------HSFB2a(2)  <---------TOE2(3)                                       <---------CCA1(2)   <---------HSFC1(1)<---- -----------AGL15    --------->ANAC58          ----------->GT1      --------->ANAC58 ---------->DOF2 ---------->AGL15    --------->ANAC58     --------->MYB52(1)        --------->ANAC58--------->AtMYB61   aaatgaggaaaaatcaaatcatcacccaaacaaaaaaaaacgagtaacgaagtgaaatttgaatcttgagaagcaaaattcgagaaccaaagctagctag  16267800      --------->ANAC46      <---------ANAC55(2)      --------->ANAC55(2)    --------->CCA1(2)                 --------->YAB1                     ------>ZmHOX2a(1) <---------YAB1                       <---------ICU4                     --------->LBD16 -----At4g35610                      --------->ICU4       <---------RVE1(1) ---->At4g35610                      <---------ATHB12    <---------GLK1(2)                   -------- -STY1(2)                          --------->YAB1        --------->ARR11(3)    --------->AHL20(2) >STY1(2)                 --------->ZAT14                <---------ARR11(3)    <---------AHL20(2) >ZAT2--------->ANAC58    <---------ZAT14           ===============================RAV--------->At4g35610 -ZAT2--------->ANAC58   ----------->GT1            ----------->RAV1(1)  ============================ -----ZAT2               --------->ALFIN1          --------->MYB46(3)  ----------->RAV1(2)  ---------   ctgatgatacgaaaccagaagaacagagtgtagaaactaataatcacatactaacaacagattttttgaaaactcctgaaataaaatcaactcaaaaagt  16267900                     ----------->GT1                                     ----------->RAV1(1)                     <------MYB83                                       --------->ANAC58           <-                     <---------ANAC55(2)                         <---------LBD16                   --                    --------->MYB59                              --------->LBD16                   --         ------>ZmHOX2a(2)                                      <---------LBD16                    <-   ------>ZmHOX2a(2)----------->GT1                          --------->GLK1(2)               -------- ->DAG2 <------ZmHOX2a(2)                         <---------HSFB2a(2)   --------->ANAC58   ---------- =========HOX2a_HOX2a<------MYB46(1)              --------->HSFB2a(2) <---------ATERF1(1) --------->DAG2 ->DOF2<---------ARR11(3)              --------->MYB46(3)    <---------ARR14(2)     *TSS ---------->DOF2   tgggatcgagatcgctcaaggataggtaaaatcgtgttcgaatcaccaaaatcgagaagatagaatccagggagacgacagtatgaagaataaaagtgaa  16268000                                     <---------TOE1(3)                                     <---------TOE2(3)                            <----------DOF2                           --------->TOE1(3)                           --------->TOE2(3)                                                     ----                           <---------------AGL15                                       --------->ANAC46    <---------TOE1(3)      --------------->AGL15                                       --------->ANAC58 --------ARR11(3)         ----------------->AGL1                                       --------->ANAC58 ------->GLK1(2)        <-----------GT1                    <---------ZAT2        ---------->DOF2 <--- ------->ARR11(3)    <---------bZIP60(1)    --------->At4g35610  <---------ARR14(2)--------->ANAC58 ----------ARR10     --------->bZIP60(1)    <---------At4g35610  --------->ARR14(2)--------->ANAC58 --->GT1  --------->HSFB2a(2)   <---------ANAC58           --------->At4g35610>>>>>>>>>TBF1  <------- ->GT1    <---------HSFB2a(2)   <---------ANAC58    <------ZmHOX2a(1)      >>>>>>>>>TBF1     --------   aaatctaagcttatagaagagtgatgttacctttacttgaaggttttgctgagaggaaggaagctcgaatcggagaagaagaagaaagcaagcaacttta  16268100                                                                 <----------DOF2                                                                 --------->TOE2(3)                             <---------YAB1                      --------------->AGL15                      --------->AHL20(2)                 <---------ARR14(2) ----->At4g35610      <---------AHL20(2)                <---------CCA1(2) ------At4g35610 ------>ZmHOX2a(1)            <---------YAB1     <---------------AGL15  --------->ICU4 ---DOF2        --------->TOE2(3)           --------->YAB1  <----------DOF2           <<<<<<<<<WRKY18 ->TOE2(3) <<<<<<<<<TBF1<-----------GT1    <---------YAB1--------->ARR14(2)<----------DOF2   gcagagagttttcttcttcctcaattaaactatttttgaggctctattataaatgggcctatctttactttaatgggcttaacttctgtcaaaatgagcc  16268200                          <---------ANAC46                       ----------->HVH21                     <---------ANAC55(2)                     --------->ANAC55(2)                --------->ATHB12                --------->YAB1                                          <---------ANAC58                -------->HAHB4                   <---------ANAC58       <---------ANAC58        -----                <---------ICU4      <---------ANAC46     <---------ICU4 <---------ANAC46        <----               <---------YAB1       <---------ANAC58  --------->bZIP60(1)                 --------->ARR11(3)               <---------ATHB12     <---------ANAC58  <---------bZIP60(1)                 <---------ARR11(3)               --------->ICU4 <---------YAB1     <---------ANAC58 <---------YAB1      <---------AtLEC2   catttgttaactccctaatgattatgtgacttctaattgtgtgtgtgtttttcttgacatcatcacttctaattgtgtgtttgcatttgcaaggtctgga  16268300                                                                                   --------->ZAT6                                                                                <---------ICU4                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                               --------->ICU4                                                                          ----------->GT1      ------                                                                      --------->AHL20(1)    ---------         <---------AHL20(2)          <-----------GT1                  --------->AHL20(2)   ---------- ---->ARR14(2)           <------ZmHOX2a(2)                            <---------AHL20(2) --------->YAB1 -----ARR14(2)          --------->ARR11(3)                       --------->AHL20(2)<-----------GT1   tttgtttgttttttattcagttttgagatcaatttgattttacgaacaaataacattgacagaaatataaaataaaatgtaattaatactatattgataa  16268400              --------->TOE1(3)            <---------ARR11(3)            --------->ARR11(3)          <---------AHL20(2)     --------->AHL20(2)                 ------>MYB83     <---------YAB1                     ------>MYB46(1)     <---------AHL20(2)   <---------ARR11(3)                                                <--------   --------->CCA1(2)      --------->ARR11(3)<---------MYB52(1)                          ------->GAMYB  <---------ARR11(3) <----------DOF2<---------At5g28300                         --------->AHL20(2) --->AHL20(2) --------->TOE2(3)    <-----------GT1                            --------->TOE2(3) >YAB1   <---------AHL20(2)  <---------AHL20(2)               --------->ZAT6  <----------DOF2 ->GT1   --------->AHL20(2)  --------->AHL20(2)  <-----------GT1    --------->ZAT6   <-----------GT1   tatagatataattaaatcttaaactttagattttattttaccatccgttattaacacatcgataacactaacacaaactactttaaataaccccaaatct  16268500  Previous    Next  AGI:  At5g40580.1    Description:  PBB2 (20S proteasome beta subunit B 2); peptidase. Identical to Proteasome subunit beta type-7-B precursor (PBB2) [Arabidopsis Thaliana] (GB:Q7DLS1;GB:O23709;GB:Q8LAK8;GB:Q8RWL9); similar to PBB1 (20S proteasome beta subunit B 1), peptidase [Arabidopsis thaliana] (TAIR:AT3G27430.2); similar to unknown [Populus trichocarpa] (GB:ABK94109.1); contains InterPro domain Proteasome, beta-type subunit, conserved site (InterPro:IPR016050); contains InterPro domain Peptidase T1A, proteasome beta-subunit; (InterPro:IPR000243); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 16265514    to: 16267984    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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