Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------TOE2(3)                        <---------WOX13(1)                      --------->ATHB12                     <---------YAB1                                    ------>ZmHOX2a(1)                   --------->CCA1(2)                            <---------GLK1(2)                  <---------ARR14(2)                           <---------At4g35610         --------->MYB52(2)                  --------->ARR14(2)                    <---------At4g35610                <---------MYB46(3)                  --------->ARR11(1)    --------->At4g35610    --------->At4g35610         --------->MYB111(1)                  --------->ARR11(3)    <---------At4g35610<-----------HVH21               ----------                  <---------ARR11(3)   <---------DEAR3(1) <----------DOF2                 <--------P                ----------->ARR10    <-----------HVH21  --------->At4g35610    --------->SPL7    ----   tgagattgaagcagcaagaagatatgattgagattagctcgtcgctgaaaatggtttcagctttcagatgctcctcatccgaacgacttggggtagttcc  16226700                                                   <------ZmHOX2a(1)                                                 <---------ANAC46                                                 <---------TOE1(3)                                             <-------GAMYB                               <------ZmHOX2a(1)                                            <---------MYB46(3)                     <---------ANAC58                                            --------->MYB111(2)                    <---------TGA1a                                            --------->MYB55(2)                     <---------O2                                           <--------P                              --------->TGA1a         ------>NtERF2                     ==================================================MYC_MYB         <------NtERF2                    <-------GAMYB                            <---------ANAC58         --------->LBD16                 <------MYB83                              <---------ANAC46       <---------LBD16                   <---------MYB46(3)      ----------->GT1   ==================     --------->ANAC46                    <------MYB46(1)        --------->DAG2     --------->O2     --------->ANAC58                   <---------AtMYB61     ---------->DOF2      <---------bZIP60(1)     --------->ANAC58               --------->ANAC58          ===============================bZIP_DOF  --------->ARR14(2)                --------->ANAC58<---------ARR14(2)          --------->ALFIN1 ->ARR10--------->DEAR3(1)      --------->CCA1(2)<---------TOE2(3)----------->GT1 <------NtERF2 -->ZmHOX2a(1)                 <----------ID1================================================MYC_MYB   tatggttacgccgcgatagatagagagggaagagagacaaggatggttgttgaggatagagggcaaaagggtaattacagaggtgtcgtgaggactgaat  16226800                                                                     ---------->DOF2                                                           --------->ARR14(2) --------->MYB52(1)                          <---------ZAT14        <----------ID1 <---------ARR14(2)               <----------DOF2      --------->ANAC58       <---------ARR14(2) <---------DOF5.7(2)   >   <------ZmHOX2a(1)      --------->ZAT14        <----------ARF1--------->ARR14(2)               >>>> =========================bZIP_DOF  --------->ANAC58      <------ZmHOX2a(1)----------->GT1   <------ZmHOX2a(1)   tgtaaggacatggaagtctttgatgctctgtagagacgaagccatcgttttgagacaagaggaaccgattcgaaagaaggtaacgaagatgatgaggaag  16226900                                            --------->GLK1(2)                                            <-----------ARR10                                --------->ARR11(3)      >>>>>>>>>TBF1             <---------ARR11(3)       <---------AHL20(2)                     -----   >>>>>>>>>TBF1               --------->RVE1(1)        --------->AHL20(2)            ---------->DOF2 >>>>>>>>TBF1                  --------->CCA1(1)        <---------AHL20(2)       --------->GLK1(1) >>>>>TBF1               ----------->GT1   <---------GLK1(2)           <---------AHL20(2)     <------   aagaagaagaagaagacgatggcagtcttgtaaatatctcgcagagaatctcatcgaataaaatttcttccatttttttggagaaatcgaaagacgatga  16227000                                                                                                -----                                                                                         --------->AtLEC2                                                           ----------->HVH21             --------->ANAC55(1)                                                         <----------DOF2                 --------->ANAC55(2)         --------->At4g35610                            <---------ANAC58                 --------->ANAC58    --------->ARR11(3)                                  <---------ANAC58                 <---------ANAC55(2)   <------ZmHOX2a(1)    <----------DOF2                 <---------ANAC46                 --------->ANAC58 ----->DOF2      <----------DOF2                       <------NtERF2<-----------RAV1(1)  --------->ANAC46 ---YAB1 <---------At4g35610                         <---------RAP2.6(2)             <-----------HVH21   aagaaggattttgctgagacttttttctttggggtttcgacgatttgtgttcttggtggctttgacacttgtgttgtttgattcttgagtcacgcaagag  16227100                                                                             <---------AHL20(2)                                                                            <---------ARR11(3)                                                                            --------->AHL20(1)                                                                            --------->ARR11(3)                                             <---------KAN4(1)              --------->AHL20(2)                                             --------->KAN4(1)              <---------AHL20(1)                                            ------->TEIL                    <---------AHL20(2)                                        <---------TOE1(2)                  <---------------AGL15                                      <---------SPL7                   --------->AHL20(2)  <---------TOE2(3)        ---------->DOF2              <---------ANAC46                  <---------AHL20(2)  <---------TOE1(3)  --------->ANAC58                   <---------ANAC58              <---------AHL20(2)     --------->MYB52(1)  ----------------->AGL2             <---------ANAC58              --------->AHL20(2)   <---------MYB52(2)  --------->ANAC58                 <-----------HVH21              --------->AHL20(2) <---------ZAT14 ------->TEIL                     <-----------RAV1(1)   ------------>CBF   --------->AHL20(2)-------- ---->CCA1(2)            *TSS <---------ANAC46--------->KAN4(2) --------->TOE2(3)    --------->ZAT14   acggacccaaaaaagaattgataagttgagttgtgtctgtcgtatgaatattcttacattcaatagcattaatttaaatatatttagtaaactaacgttt  16227200                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC46                                --------->DAG2                                             <---------ANAC58                            <---------ANAC55(2)                                            <---------ANAC55(1)                            ----------->GT1                                                <---------ANAC55(2)                           <---------TOE2(3)                                               <---------ANAC58                     <---------AHL20(2)                     --------->AHL20(2)--------->CCA1(2)                     --------->AHL20(2)          ------->GAMYB               --------->ARR11(3)                     <-----------TBP          <-----------GT1     <---------TOE1(3)     <---------ARR14(2)                  --------->ARR11(3)        <---------AHL20(2)    --------->DAG2        --------->ARR14(2)                  <---------ARR11(3)       --------->YAB1----------->GT1     <---------ARR11(3) <---- ->TOE2(3)    ---------->DOF2  ---------->DOF2--------->MYB52(1)  <---------TOE2(3) <---------ZAT18   atgagataacaaaaaaaaaagatttatataacgtaaagttttctattttaacggagtacaagttaaataaggttaccaagatttagggcagtttcgtgtt  16227300                      <---------AHL20(2)                      --------->AHL20(2)                     <---------AHL20(2)            --------->AHL20(2)                                                 --------->YAB1        <---------AHL20(2)                     <---------TOE1(3)          --------->AHL20(2)      <---------RVE1(1)                  <---------AHL20(2)              <---------WOX13(1)       ---      <---------CCA1(1)       <---------AHL20(1)                    --------->ANAC55(2)          ----     <---------ARR11(3)   <---------AHL20(2)   <---------TOE2(3)    <---------ANAC55(2)          ----     --------->ARR11(3)--------->AHL20(1)--------->AHL20(2)     <-----------HVH21       --------->ICU4  <------ZmHOX2a(1)  --------->ICU4     --------->AHL20(2)     <---------bZIP60(1)    --------->YAB1 ------DOF2 <---------AHL20(2)--------->AHL20(1)               --------->bZIP60(1)<---------ICU4 <---   tttaggagatttttttaaatgaaattattttatatattagcatttaattagggttttcttgaacgatgtcacttaattgaataatcagtagtaattgaaa  16227400                                                                                                   <-                                                                                                   --                          ----------->GT1                                                          <-             --------->ANAC58                                                                     <--             --------->ANAC58                                                                     ---           --------->MYB46(3)                     --------->ANAC58                    <------ZmHOX2a(1)      --------->YAB1    <---------ZAT18         ---------->DOF2<---------AHL20(2)   --------->ANAC58     <---------YAB1     --------->ZAT14       --------->At4g35610            <---------bZIP60(1)  --- ------>RVE1(1)         <---------ZAT14     --------->YAB1     --------->AHL20(2)   --------->ANAC58 ----->GLK1(2)--------->MYB46(3) <---------TOE2(3)--------->ANAC58      <---------At4g35610    ------ ----->ARR11(3)         --------->ZAT18  --------->WOX13(1)  <----------DOF2 --------->bZIP60(1)  <-- ------ARR11(3)     <---------------AtSPL8 <---------ATHB12  --------->TOE2(3)  --------->YAB1 ------   atctcttatcaaaacaaccaatgtagtacagtattaagttattcaatcagcaaagcaattcttctttaatttttagttgacatcataaggaatcgaataa  16227500            --------------->AGL15            <---------------AGL15           ----------------->AGL3           ----------------->AGL2          --------->ANAC58          --------->ANAC46                                                <---------ANAC58        <---------ALFIN1                                              <---------DAG2     <-----------GT1                                                -------->P --------YAB1                                                       ------>MYB46(1) ------->AHL20(2)                                                 --------->AtMYB61 --------AHL20(2)                                                 <---------MYB59 -------AHL20(2)               --------->DAG2         <---------At4g35610 <---------ANAC58 ------>AHL20(2)   ----------->GT1                    --------->At4g35610 <---------ANAC46 ------>AHL20(1)  --------->DAG2         --------->MYB52(1)      --------->DEAR3(2) --->YAB1 --------->ANAC58    ---------->DOF2      <---------ATHB12 ------>MYB83 -------AHL20(1) ---------->DOF2         ------>MYB46(1)         --------->MYB46(3)        <---------YAB1 --->AHL20(2)   <---------ATHB12         ------>MYB83--------->MYB52(1)  <-----------------AGL1   tataatttctccaccccaataaagtaactacaaaaagggaacctatcggtctaatcaactgagaagaaccaacctttcgtttatggcaaaactatgttta  16227600  Previous    Next  AGI:  At5g40470.1    Description:  similar to F-box family protein (FBL4) [Arabidopsis thaliana] (TAIR:AT4G15475.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14707.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101) Range:  from: 16225237    to: 16227125    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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