Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <------ZmHOX2a(1)     <---------MYB52(1)    --------->TOE2(3)    --------->TOE1(3)  <---------TOE1(3)                  --------->ZAT14  <---------TOE2(3)                  <---------ZAT14 <---------DOF5.7(2)        --------->O2                  ------>ZmHOX2a(1) ------>TOE1(3)            ------>NtERF2               ---------->ID1            ---------->ID1 ------>TOE2(3)           <---------ALFIN1    <---------AtMYB61              <----------DOF2   <-----   ccttaacgttaggacgagcatggttatgccacctctctctgcattgttttggtgttcgtccttcaaaatgttttgcgacctttgtccattttttgggttc  16194600                                                    ------>ZmHOX2a(1)                                       <---------AHL20(2)                                      --------->ARR11(3)                                      --------->AHL20(2)                                           <-                                      <---------AHL20(2)           ---------->DOF2                 --            <----------DOF2           <---------AHL20(1)     --------->AHL20(2)        ----------->GT1      <---------ALFIN1                --------->AHL20(1)     --------->AHL20(1)       --------->DAG2      --------->AtMYB61     <-------TEIL           --------->TOE2(3)                 ---------->DOF2    ------>NtERF2   <-----------GT1   <---------ARR11(3)--------->AHL20(2)      --------->AHL20(2) <- --TEIL <---------CCA1(2)  <-----------GT1   <-----------GT1 <---------AHL20(2) --------->YAB1     --   aagtgccaccatctctttcaattttctatatacattacaatatattttcacatcctcaaaaaataaaataaaaggcatacaataaaaaaaagttatatga  16194700                                               --------->AHL20(2)                         <----------DOF2                                    <---------AHL20(2)                                    -----------                                    --------->AHL20(2)                                    <----------           <------ZmHOX2a(1)       <---------AHL20(1)                                    <-----------  ----------------->AGL1           --------->AHL20(1)                          --------->GLK1(2)  <-----------------AGL1       <---------AHL20(2)                             --------->ARR14(2) --------ARR14(2)             --------->AHL20(2)                              <---------ARR14(2) ------->ARR14(2)             <---------AHL20(2)                              <---------GLK1(2) --------GLK1(1)     --------->YAB1--------->AHL20(2)                       ----------->ARR10 ------->GLK1(1)--------->AHL20(2) <---------AHL20(2)--------->AHL20(2)   ------>ZmHOX2a(1)   gaattcccaaggaggaaattgaataatagtttttaaatttatttgagaataaaaaaaaaatgaagacttacatgtcctcagattctgtccatcttttttt  16194800                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  <--        <---------DAG2                  <----------DOF2                                          <---        <----------DOF2              ------>NtERF2                                              <----     <-----------GT1                --------->DEAR3(1)                                         <-----  --------->bZIP60(1)             <---------ATERF1(1)                                          <-----  <---------bZIP60(1)            --------->ANAC58                                         --------->ATHB12  --------->TGA2(1)              --------->ANAC58                                         <---------ICU4  <---------TGA2(1)      <---------ANAC58                                                <---------YAB1 ---->AGL15              <---------ANAC58         --------->YAB1                         --------->ICU4 -----AGL15              <---------ANAC46        <---------YAB1        --------->YAB1  --------->YAB1 ------AGL3         ----------------------->TaNAC69(2)       <-----------GT1          <-------TEIL<--   ggtgatgtcacttttcttcaaatatttgcttgtgctcgcctcctttttattctcataagtttttttcatcttatcatcttcaagttgattcatgatttcg  16194900 -------GAMYB ---------ANAC58 ---------ANAC46 ---------ANAC58                                <-------TEIL -----MYB83                                 <---------TOE2(3) -----MYB46(1)                              <---------TOE1(3) ------->MYB55(2)                      -------->HAHB4 ------->MYB52(2)                      <--------ATHB1 --------MYB46(3)                      <---------ICU4                                               - -------AtMYB61                       <---------ATHB12                                         ------ -------TOE2(2)                       --------->ICU4                                   <---------YAB1 ------MYB52(1)                       <---------ATHB51     =======================================MADS_MADS ---GAMYB                             --------->AHL20(2)   <---------DAG2         <---------------AGL15 ----ANAC58         --------->HSFB2a(2)--------->ATHB12    --------->TOE2(3)      --------------->AGL15 ----ANAC58  <-----------GT1          <---------AHL20(2)   <---------------AGL15  =================== -------TOE1(2)     <---------HSFB2a(2)--------->ATHB51    --------->TOE1(3)     ----------------->AGL2   ttggttgtatttttgataccttctagcactggcacatcaaataattgaggttcacccattaccttatcaagagttggctcataacccttattagtcagtt  16195000        ------------>CBF                                          --------->STY1(1)      --------->ZAT18                                            <---------MYB52(1)      <---------ZAT18                       <---------YAB1  <-----------GT1     <---------ANAC46              --------->AtLEC2        --------->KAN4(2)    --------------->AtSPL8         ------>ZmHOX2a(1)       <---------ARR14(2)      <---------LBD16 <------------CBF      --------->ZAT14    <---------ICU4   --------->ARR14(2)     --------->ALFIN1 -------->ATHB12       <---------ZAT14    --------->YAB1  <---------KAN4(1)     <------------CBF --->ARR14(2)       --------------->AGL15<---------ATHB12 <----------TaMYB80   --------->DAG2    ---- ===================================MADS_MADS            ---------->TaMYB80   --------->ICU4    <----   cttcattgtgtacaatctcattccctatagtgtattcctgcaaatcatgaaaattttcgaatatacccttagggtttgcaaaaattgggggattatcgat  16195100                   >>>>>>>>>WRKY6                                             --------->ATHB12                 --------->WRKY38(1)                                         <---------YAB1              <---------MYB46(3)                                           --------->YAB1        <-----------GT1             <---------WOX13(1)           --------->ARR14(2) ----->YAB1 <-------GAMYB     --------->YAB1     ------------>CBF<---------ARR14(2)   --------->MYB111(1) --ZmHOX2a(2)<---------MYB52(1)    <------------CBF             <------ZmHOX2a(1)    <--------P   catatggatttttccgttgttgactatgttattcatagattgctcaagagtatcaatatttgagtaggatttgatactcatgaatgggtagtttgatgga  16195200                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                           xxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                            <------ZmHOX2a(2)   <----                                                                   <---------ICU4        --------->ARR11(3)                                                                   --------->ATHB51      <---------ARR11(3)                                  --------->ATHB12            --------->GLK1(2)          <---------GLK1(2)                         ------>MYB83              <---------YAB1 <---------YAB1   <xxxxxxxxxxxxxxxxx         <------ZmHOX2a(1)       <---------YAB1 --------->GLK1(2) --------->ICU4   --------->CCA1(2)<      <------ZmHOX2a(1)  ------>MYB46(1)       <---------GLK1(2)--------->YAB1---------->DOF2<-------   atttcataggaggaagagttgtaaaccaaatggttttgattagtatccaaattctgattttgagaatcataatttgggatcaaaggtataagattttggt  16195300                          ----------->GT1                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        ------>ZmHOX2a(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       <------ZmHOX2a(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                       --------->CCA1(2)     <xxxxxxxxxxxxxxxxsmallRNA(s)                      <---------AGP1         <xxxxxxxxxxxxxxxxsmallRNA(i)                      --------->AGP1        <xxxxxxxxxxxxxxxxsmallRNA(i)                      --------->ARR14(2)   xxxxxxxxxxxxxxxx>smallRNA(i)                      <---------ARR14(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      --------->ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->CCA1(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------GLK1(1)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<---------TOE1(1)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->ARR11(3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <---------ARR11(3)   ---------->DOF2<---------TOE2(1)   --------->ATHB12   <---------ARR11(3)------>MYB46(1)  --------->ICU4     <---------CCA1(2)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <---------MYB59 ------MYB46(3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       --------->TOE2(3)                      <- -----AtMYB61    <-----------HVH21      ------>MYB83     <---------WRKY18(1)             <---------YAB1 ---->ALFIN1--------->GLK1(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                <---------TOE1(3) xxxxxxxxxxxx>smallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <---------TOE2(3) -----DEAR3(1)  --------->WOX13(1)    --------->AtMYB61<---------WOX13(1)     ----------->GT1     --- xxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)--------->HSFB2a(2)          --------->DAG2       --- ---------At4g35610 ----------->ARR10<xxxxxxxxxxxxxxxxsmallRNA(i)           ---------->DOF2<---------AHL20(2) --AtMYB61 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------HSFB2a(2) <---------YAB1 <---------YAB1 <--   ggtgctgattagagatatcagtcagatctggtgaaaaagaccatccagtacgagaagattgacctaaattgtcattgaaaaagttaagattattttttgg  16195400               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               --------->TOE2(3)              <--------HAHB4              <---------ICU4              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              --------->ATHB12             --------->ICU4             <---------YAB1                                               <---------GLK1(1)           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         --------->GLK1(1)           --------->YAB1                                          --------->WOX13(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <------ZmHOX2a(2)       <-------TEIL                                             --------->ARR11(3)         ------>MYB46(1) ---------TaMYB80                                               <---------ARR11(3)         -------->P ------>ARR14(2)                                               --------->GLK1(1)  --------->AHL20(2) ------->TaMYB80       <------ZmHOX2a(1)                  <---------At4g35610     <---------AHL20(2) -------ARR14(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------YAB1 --------->YAB1       ------>MYB83   tatatgcgatgcatcatcattaacaggacatcgatgagcatcgtttaagatgaaattttcatcggagatcaatgagaattccatttaaacaccaacttga  16195500  Previous    Next  AGI:  At5g40430.1    Description:  MYB22 (myb domain protein 22); DNA binding / transcription factor. similar to MYB100 (myb domain protein 100), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G25230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14744.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 16193655    to: 16194959    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version