Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->At4g35610                                                            <---------At4g35610                    --     <------MYB46(1)                                      <---------WRKY38(1)                      --     ----------->GT1                                --------->TOE2(3)                       ---------     <------MYB83                                   <----------DOF2  <---------GLK1(2)     --------->YAB1    --------->MYB59      --------->ALFIN1     --------->At4g35610  --------->ICU4   --------->ARR11(3)  <---------MYB52(1)   --------->ALFIN1      --------->GLK1(2)   ---------->DOF2    <---------ARR11(3)   ctctgtttggttaaaaacagttcaagtgtgtggctagaaatgcagagaagctaactttagtcatcggcaaagattatctaaaaaaacatcttaacataaa  16174800                              <---------ANAC46                           <---------MYB52(1)                          --------->REM1(1)                          <-------GAMYB                             <---------MYB52(1)                       <---------At4g35610                         <---------RAP2.6(3) ------->TOE1(2)    <---------ANAC58             ------->TEIL  ------------>MYB.PH3(1)              - ------->TOE2(2)    <---------ANAC58           <-------TEIL<---------ICU4          ---------->DOF2 -- >TOE2(3)       <---------GLK1(2)        ---------->DOF2  --------->ICU4       ----------------------   acatatgaatagccatcagattgtttgctgttacttagaccgaaaaagatgcatttgatactaattagccgttacaacaaaatccaaaagaagataaacc  16174900                                                      --------------->AGL15         <---------TOE2(3)        --------->CCA1(2)   <---------------AGL15       ---------->DOF2         ----------->GT1     ------->TEIL -------->DAG2               ---------->DOF2     <-------TEIL              --------->YAB1     ------- -------->DOF2      --------->ANAC46      --------->ANAC58      --------->CCA1(2)             <------ -->ANAC81      ----------->RAV1(1)       --------->ANAC58     --------->ARR11(3)        ---------->DOF2   aaaaagtcataaaggttccaacacaaaaccaaaaagataaacataggcaaatgcatctctaaatagatatagactaaacatatttagccatcaaagagct  16175000                                      <----------DOF2                                      --------->ATHB12                                      <---------DAG2                                       -------->HAHB4                               --------->TGA2(2)                                          <---------YAB1                              <-----------TGA1                                            --------->ICU4                              <-----------HVH21                                           <---------ATHB12                             --------->ANAC46                                       <---------TOE1(3)                             --------->ANAC58                                       <---------TOE2(3)                             --------->bZIP60(2)                    XXXXXXXXXXXXXXXXXXXX>MIR866-5P            --------->TOE2(3)--------->ANAC58                      ---------->DOF2 <---------DOF5.7(2)    --------->ANAC58        <-----------STF1                      <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->AtLEC2  <---------HSFB2a(2)             <---------AHL20(1)   <---------ARR14(2)    --------->ANAC58  --------->HSFB2a(2)       <-----------GT1   <XXXXXXXXXXXXXXXXXXXMIR866-3P    -- -->At4g35610       --------->At4g35610    <----------DOF2 <-----------GT1 <---------GLK1(2)       -- ---At4g35610  --------->WOX13(1)  <---------ALFIN1   <---------ARR11(3)   --------->ARR14(2)      --   cacctcatgcaaaacgtcaatcttctgcaaaacgtcaccacttttctttttcacaatatacttactcttcaaagacggattttgttaacgaaatgattca  16175100                                                          ----------->GT1                                                         --------->DAG2                                                        ---------->DOF2                                                   --------------->AGL15                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------ANAC46                                                  ----------------->AGL3                                                  --------->MYB52(2)           <---------WOX13(1)         <---------CCA1(2)                 --------->ARR14(2)                 <------------CBF     ------>ZmHOX2a(2)                     XXXXXXXXXXXXXXXXXXX>MIR866-3P     --------->ATHB12    <------ZmHOX2a(2)                      <---------ARR14(2)               *TSS      <------------CBF   --------->ARR11(3)       --------->ATHB12    <---------MYB52(1)          --------->ICU4   <---------ARR11(3)       <--------HAHB4xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------YAB1 ------->ANAC58            <---------ATHB12--------->GLK1(2)              --------->YAB1 ------->ANAC46      ----------->GT1   <XXXXXXXXXXXXXXXXXXXXMIR866-5P    --------->ICU4 ------->ANAC58      --------->ALFIN1 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------YAB1       >>>>>>>   cacgagatcgtgtttcttcaagggtgtgaatcatttagttaacaaaatccgttccttgaaaagtaagaatagatgatgatgattgatgaattgaagaaaa  16175200              --------->ATHB12             --------->ICU4             <---------YAB1           --------->YAB1          --------->ICU4     <---------ANAC58     <---------ANAC46     <---------ANAC55(2)     --------->ANAC55(2)     ===========================================bZIP_DOF     <---------ANAC58     --------->O2 <---------AHL20(2)                               ---------->DOF2     <---------O2--------->AHL20(2)                            <----------ID1     --------->TGA1a                                       ---------->DOF2         <---------ZAT6     <---------TGA1a                                  ------------------------>ANAC81        <------- >>>GT-3b <---------YAB1             <----------DOF2 <------ZmHOX2a(1)            <---------TOE2(3)   ataagagacgtgatgatgattaaatcggagaagagttctctttttttttgtaagaggagtcgaaagagaaaaagaaaacaaactagggttaatgactttg  16175300                                        <---------DEAR3(2)                                        <------MYB46(1)                                       <---------MYB46(3)                                       <---------DEAR3(1)                                      --------->SPL7                                      <---------MYB55(1)                                      <--------P                                 --------->MYB52(1)                                --------->MYB52(1)                         <---------AHL20(2)                              --------->MYB46(3)                          --------->AHL20(1)                              <---------MYB52(2)                          <---------AHL20(1)                            <-----------GT1                               --------->AHL20(2)                       <---------GLK1(2)<------MYB83        ------>ZmHOX2a(2)                       <---------ARR14(2)                  <------ZmHOX2a(2)                       --------->ARR14(2)                 <---------ARR14(2)         <---------ARR14(2)                       --------->ARR11(3)                 --------->ARR14(2)         --------->ARR14(2)                       <---------ARR11(3)     <---------GLK1(2)      <---------RAP2.6(3)                --------->At4g35610  <-----------HVH21 --------->DEAR3(2) <---------AHL20(2)        < ---DOF2        <---------At4g35610  <---------MYB52(1)--------->MYB46(3)--------->AHL20(2)<---------GLK1(2)   ggttttaggcttatatatagctgcagattttaacaaaccggtcggtccgattatcgaaccgatccgattgccgaaattaatttcgccgatacagtttctt  16175400              --------->TOE2(3)      <------MYB46(1)    --------->DEAR3(1)               <------MYB83    <---------ALFIN1                 <---------DEAR3(2)    --------->AtMYB61     <---------MYB52(1)   --------->MYB46(3)   ----------->GT1          <-------TEIL ------ZmHOX2a(2)    --------->MYB52(1)<---------MYB52(1)------>ZmHOX2a(1)                         <-   cgatcaccaccgataaccaaaattatcggttaatcgagtcggtttgctcggttcatgtcctcaggtctaagagggagtagtctgttcaaattttcaattg  16175500             <----------DOF2                                                                      ---             <---------DAG2                                                                       <--       --------->HSFB2a(1)                                                                        <--       <---------HSFB2a(1)                                                                    -------       --------->HSFC1(2)                                                                 --------->AHL20(2)      --------->ARR14(2)                                                                --------->ANAC55(2)      <-----------ARR10                                                              --------->ZAT14      <---------ARR11(1)         <---------ANAC58                                    <---------ZAT18      ------->TEIL <---------AHL20(2)                          ----------->GT1       --------->ZAT18      <---------ARR14(2)         <---------ANAC58   <----------DOF2     ----------->RAV1(1)   <------     <---------GLK1(2)    <---------YAB1            <---------DAG2     <----------ID1<---------ZAT14     <---------CCA1(2) <---------AHL20(2)   ----------->GT1   <---------ZAT6  --------->DAG2  <------ ---------DOF2    <---------AHL20(2)       <---------TOE2(3)  ----------->GT1---------->DOF2  -------   tcttttcgaatctccctttttttatttgattatttgcatgcgattaatgtaaaacttttttgaactgttaaaaacaacaaaaagtagttcacttaattaa  16175600                                                                               <-----------GT1                                                                            -------->ATHB1                                                                            --------->ATHB51                                                                            <---------ICU4                                                                           <---------YAB1       --------->YAB1                                                      --------->AHL20(2)      <---------ATHB51                                                     <---------AHL20(2) ------>AHL20(2)                                                           --------->AHL20(1) -------ICU4                                                               --------->ICU4 -------AHL20(2)                                   <---------TOE2(3)    --------->AHL20(2) -->AHL20(1)                                 <---------MYB46(3)         <---------AHL20(2) ---AHL20(1)                                 <------MYB46(1)           --------->AHL20(2)        ---- ---AHL20(2)                                 <------MYB83       --------->AHL20(2)               <--- -->AHL20(2)       <-------TEIL        ---------->DOF2          <---------AHL20(2)       <<<<<<<<<<MYB80   ttaatacaataatgtgagaaatacgtttagtgagatagtcagaaagttggtttgatgtttaaacatttaaatataaaattattacatttttggtttgata  16175700  Previous    Next  AGI:  At5g40384.1    Description:  MIR866a; miRNA Range:  from: 16175051    to: 16175176    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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