Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ----------->GT1                                                     <---------TOE2(3)                                                  --------->MYB46(3)                                                <-----------GT1                                           --------->AHL20(2)               --------->YAB1                                           --------->AHL20(1)          <---------ICU4                                           <---------AHL20(2)         <-------TEIL    <---------DAG2 -----ATHB12         <----------DOF2      --------->AHL20(2)    <---------YAB1        <----------DOF2   ctatttcgccacaacgatgaaaactttacaaatgaaaaaaaaaaaaaaattaaccaaggtaaaattttgatattcatttcataatccactttttttttta  16169000                                      <---------ATHB12      --------------------->WRI1    --------->WOX13(1)                   <---------AHL20(1)     --------->TOE2(3)             --------->AHL20(2)                    --------->AHL20(1)   <---------ARR11(3)              <---------AHL20(2)                    --------->ARR11(3)   --------->AHL20(1)          --------->AHL20(1)                <---------ARR11(3)   <---------AHL20(1)          <---------AHL20(2)            --------->YAB1      <----------DOF2   --------->ARR11(3)          <---------AHL20(1)   --------->DAG2      --------->AHL20(2)  --------->RVE1(1)            --------->AHL20(2)  ---------->DOF2 --------->TOE2(3)  --------->CCA1(1)      ----------->GT1      --------->AHL20(2) --------->GLK1(2)   gttaatatcttagaatgaatagtagttttgtaattaattaatcaagaattaaaaaaagttctatcaaaatctaaatatatagtcttttgtttgtaatatg  16169100            <---------ARR14(2)                                  <---------ANAC58        <-----------------AGL1   --------->YAB1                 <---------ANAC46              <------       <-----------GT1          <---------ATHB12                <---------ANAC58        --------->ANAC55(2)   <----------DOF2  <----------DOF2    <-----------GT1        --------->ARR11(3)        <---------ANAC55(2)   <---------DAG2 ------->TEIL--------->WOX13(1)    <---------YAB1     --------->YAB1   ----------->GT1   ttctgctttttacaaatatggacttttggtatcaatcatattcacttgttcagtattattcgaatttcttgaatcatataaaaacgaattatgtaataaa  16169200                                                                                             <-------                                                                                             --------                                                                                             --------                                                                 <-----------GT1       ------>ZmHOX2a(1)                                                           <---------AHL20(2)       <<<<<<<<<ARR1                         ------>ZmHOX2a(1)               <---------AHL20(2)         <<<<<<<<<ARR1                    <---------DEAR3(2)                   --------->AHL20(2)         <<<<<<<<<ARR2                  <---------ANAC46         <-----------GT1 --------->AHL20(2)       <<<<<<<<<ARR2 ---AHL20(2) <-----------RAV1(1)   --------->YAB1  ----------->GT1              ------------>CBF   acgatataacaaatactgtggccggtcctaatgtcaattgtcatataactatatagtatatatatataaacctttctgcaaatacaatcctatatttaaa  16169300                                                                                     --------->ICU4   --------->MYB46(3)                              --------->WRKY38(1)        <---------ICU4  ------>MYB83                                  <---------ANAC58           *TSS      <---------YAB1  ------>MYB46(1)                    --------->TOE2(3)                ------>ZmHOX2a(2) --AHL20(2)              ----------->GT1        <---------ANAC58     <------ZmHOX2a(2)         <----- ->AHL20(2)     ----------->GT1      <----------DOF2                --------->ARR11(3)      <-------- --->TBP        <---------ANAC55(2)  --------->TOE1(3)              <---------ARR11(3)<---------ICU4   taccaacatccacaagataagtaaaaacagaaaaaaaaactttaaaaaatgcgttgcctcacaaaaacaagatcgtttcattatgtcatcattttttatt  16169400                                                                                              <------ZmHOX2a(2)                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                               --------->DEAR3(1)                        --------->SPL7      --------                               ----------->HVH21    <---------ARR14(2)  <------NtERF2        <-------                             ------>ZmHOX2a(1)      --------->ARR14(2)  ------>NtERF2        --------                          ==================HOX2a_HOX2a     <----------DOF2      --------->GLK1(1)                      <---------SPL7              <-----------HVH21    ----------->HVH21     <-------                     <---------ANAC58            --------->DEAR3(1)   <---------RAP2.6(2)   ---------                     <---------ANAC58         <---------ALFIN1        <---------ANAC58      ---------                <---------ANAC58             --------->MYB46(3)       <---------ANAC58   --------->LBD16                <---------ANAC58       ---------->DOF2   <---------MYB52(1)      <---------GLK1(1)         <-----------GT1  ------>ZmHOX2a(1)  <---------ABI4(2)     --------->ALFIN1      <---------At4g35610     <----------DOF2---------->ID1   <------ZmHOX2a(2)<---------LBD16 <---------ANAC46 <---------LBD16 ------GT1    <---------MYB52(1)------>NtERF2<---------MYB55(2)  <-----------RAV1(1)  ------>ZmHOX2a(1) -AHL20(2)<---------At5g28300===============HOX2a_HOX2a --------->LBD16<---------SPL7 ===============HOX2a_HOX2a   ccttcttctttttaccgttcttgtcgtcctcctccgacgatcaaagaaccaccgtctccggtcttttctgtggcggacgtagcaaatcctccgcagatcc  16169500                                                                           --------->TOE2(3)                                                                          -------->ATHB1                                                               --------->ANAC58                                                            <---------ARR14(2)                                                            --------->ARR14(2)                        --------->GLK1(1)                   <---------MYB52(1)   --------->ANAC46                        --------->CCA1(2)              --------->ANAC58   --------->YAB1                       <---------ARR14(2)              --------->ANAC58   <--------HAHB4   --------->REM1(1)   --------->ARR11(3)              --------->ANAC46   <---------ICU4 ->ARR14(2)            <---------ARR11(3)            <---------ALFIN1     --------->ATHB12 --ARR11(3)            --------->ARR14(2)           <---------REM1(2)    <---------ATHB12 ->AGP1                --------->ARR11(1)       --------->MYB52(1)   ------->GAMYB --------->ZAT18 --ARR14(2)          ----------->ARR10        <---------MYB52(2)   <---------At4g35610   --------->REM1(1) >At4g35610    <---------ANAC46       --------->ZAT6--------->ZAT14--------->At4g35610--------->ANAC46 >GLK1(1)   <----------DOF2   xxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->ANAC58<-----------GT1     --   aaactacatcccaactttcgtcgaagatatgcattcactatctctaaaactaactacacgccgtttcgcaactgaatcattaaactccactacatctatc  16169600                                                                       <---------ALFIN1                                                                      --------->LBD16                                                     --------->ANAC58--------->ANAC58                                            <---------ZAT2       <---------ALFIN1                                            <---------At4g35610 --------->MYB46(3)                                  --------->SPL7     <---------ANAC46--------->ANAC58                                --------->ORA47(1)   <---------ANAC55(2)                                <-----------HVH21    --------->ANAC55(2)                                <---------SPL7       --------->ANAC58--------->ANAC46                        ------>ZmHOX2a(2)   --------->ZAT2     --------->ANAC46                    --                       <------ZmHOX2a(2)    --------->At4g35610--------->ANAC58                   ---                      <---------ARR11(3)----------------------->TaNAC69(2)                        ---                      --------->ARR11(3)<-----------HVH21      --------->ANAC58                   ---        ------>ZmHOX2a(2)      --------->DEAR3(1) <---------MYB52(1)<---------LBD16              <--- ------->ANAC46  --------->O2<---------At5g28300 <-----------HVH21------->TEIL                  -----   tacgctctgatccaatgccacgacgatctctcaccgtccgattgtcagctctgttacgcgattgcacgcacccgcatccctcgttgtctcccttcttcct  16169700      <---------HSFB2a(1)      <---------HSFC1(2)      --------->HSFC1(2)      --------->HSFB2a(1)     --------->GLK1(2)     <---------ARR14(2)     --------->ARR11(3)     <-----------ARR10            --------->ANAC58     --------->ARR14(2)           --------->ANAC46     <---------ARR11(3)    ------>ZmHOX2a(1)                                                        <    <---------GLK1(2)----------------------->TaNAC69(2)                                <---------ANAC58  --------->ANAC58  <---------MYB46(3)                                                 <---------ANAC58  --------->ANAC58 <---------MYB52(1)   --------->TOE2(2)                     <---------MYB52(1)  --- ------->LBD16    <-------GAMYB   <---------ANAC55(2)                      <---------ANAC46      ---- ------>ANAC46   <---------MYB46(3)     --------->TOE1(2)                <-----------HVH21       ---- ------>ANAC58  <---------DEAR3(1)--------->ANAC58                      <---------ANAC58         ---- ------>ANAC58------------>AtMYB77--------->ANAC55(2)     ------->TEIL  <---------ANAC58         ---- ------LBD16------>ZmHOX2a(1)  <---------MYB52(1)  <---------TOE2(3)    <---------ANAC46         ---- ->ZmHOX2a(1)----------->HVH21<-------GAMYB       <-----------GT1      <-------TEIL    <---------ANAC46   ccgcaagaatcttcctcgacggttgtttcctccgttacgaaacttacgagttttacgatgaatcagtctccgatgcgtcggatagtttttcttgtagcaa  16169800                                               <---------ANAC46                                              ------>NtERF2                            <-----------------AGL1            <------ZmHOX2a(2)                 <------NtERF2           <---------ARR14(2)                <---------RAP2.3(1)                               <-----     <---------MYB52(1)     <-----------------AG                                      <------NtERF2<- ------>NtERF2              ----------------->AGL1       <---------MYB46(3)          --------->LBD16 ---------ALFIN1   --------->ARR14(2)        ------>NtERF2--------->At5g28300       --------->DEAR3(1) ---->GAMYB--------->ARR14(2)               <---------DEAR3(1)  ---------->DOF2    <---------LBD16 <- ----->ANAC46      <---------ARR14(2)      <---------LBD16<-------GAMYB            --------->ATERF1(1) ----->ANAC58    <---------DEAR3(2)   <---------ARR14(2)<------NtERF2              <------NtERF2<---- ----->bZIP60(2)<---------TOE1(2)  <---------ANAC46     <---------ANAC46         <---------DEAR3(1)<- ----->MYB46(3)------>ZmHOX2a(1)   <---------HSFB2a(2) <---------LBD16          --------->ATERF1(1)-- ----->ANAC58------>ZmHOX2a(2)    <---------LBD16     ------------>AtMYB77     <---------ATERF1(1) --   cgacaccgttttggatcctcggttcgggtttcaagtttcggaaactgcggcgagagtcgcggttagaaaaggagggtttggagtcgccggagagaatgga  16169900  Previous    Next  AGI:  At5g40380.1    Description:  protein kinase family protein. Identical to Cysteine-rich receptor-like protein kinase 42 precursor (CRK42) [Arabidopsis Thaliana] (GB:Q9FNE1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G70530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14731.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69244.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:I Range:  from: 16169375    to: 16172405    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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