Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------->GAMYB                       --------->MYB46(3)                     --------->MYB52(1)                    <---------WRKY38(1)                 --------->At4g35610              <---------ANAC58                <-----------RAV1(1)      --------->ANAC58              <---------ANAC58                <---------MYB46(3)       --------->ANAC58             <------NtERF2                ===========================================================         <---------ANAC58                 <---------------AGL15        --------->ANAC46         <---------ANAC58  --------------------->WRI1                  <---------ANAC55(2)     <----------DOF2---------->CDC5  --------->At4g35610               --------->ANAC55(1)  <-----------GT1<---------At4g35610 --------->ZAT2  ---------->DOF2   --------->ANAC55(2)  <---------AHL20(2)<---------WRKY12 <---------At4g35610     ------>ZmHOX2a(1)   aaatttactttcggtgtcgagctcaacggccttgaacttagctcccaattgttgcaaaagctccttcactctcacgcaatatggacaataagtcttgctg  16166000                     <---------AHL20(2)                    --------->AHL20(2)                 --------->WOX13(1)                --------------->AGL15                      --------->HSFB2a(2)             <-----------GT1                     --------->ANAC46          <---------ICU4                       --------->ANAC58     --------->LBD16<---------AHL20(2)         --------->ANAC58           ------->TEIL    --------->HSFB2a(2)                       <---------ZAT18   <-------TEIL                       --    <---------HSFB2a(2)                --------->ATHB12    <---------HSFB2a(2)                    ---    <---------HSFC1(1)           <---------ARR11(3)---------->DOF2  <-------TEIL         <---------AHL20(2) ===============================MADS_MADS     --------->ZAT18  --------->CCA1(2)        --------->AHL20(2)   caaattccagaaaaattaccaattaaataactcaaaatcatccattggtacacaaaagcgtctagatacatccatgaatcgttcatcgtataaaatttcc  16166100                                --------->ANAC58                      --------------->AGL15                      <---------------AGL15             <-------TEIL                     ----------------->AGL3            --------->CCA1(2)                     ----------------->AGL2           <---------ARR14(2)               --------->At5g28300          --------->YAB1        <----------ID1        --------->ARR14(2)              --------->LBD16          --------->ANAC46 ---------->DOF2    --------->ARR11(1)                     <---------ANAC46          --------->ANAC55(1)   --------->ANAC58<-------TEIL                         <---------LBD16 <---------YAB1      <-----------------AGL3   <---------ARR14(2)                 --------->GLK1(2) ------->YAB1      --------->ARR14(2)         <---------GLK1(2)                 <---------GLK1(2) ------>ICU4       <---------ARR14(2)         --------->ARR14(2) --------->MYB52(1) <---------LBD16   atgatgaaacacacataatcgaatccatataaagaagccaaaaacacagattcgaagattcacaaacaaacagtaatcgagagaatcgcgggaaattttg  16166200                                                         ------>ZmHOX2a(1)                                                     ------>ZmHOX2a(2)                                                    --------->GLK1(1)                                                    <---------GLK1(1)                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                <---------TOE2(3)                                                <---------TOE1(3)                               --------->MYB46(3) ------->GAMYB                             --------->MYB52(1)<---------DOF5.7(2)                     --------->TOE1(3)         <-----------GT1<----------DOF2                  --------->ARR14(2)         --------->DOF5.7(2)    <---------AtLEC2                  <---------ARR14(2) <---------GLK1(2)  --------->TOE2(3)                 <------ZmHOX2a(1)  --------->ATHB12<------ZmHOX2a(2)   tgcgaatagagagaagagaggaacctgaaaacaacgactgattcgctgttaacgatctccttagctttctgcatcgccatcttcgtcgagattagagaac  16166300              <-------GAMYB             <------MYB46(1)             <------MYB83             <---------MYB46(3)                                                        --------->YAB1           <--------P<---------AGP1    ---------->DOF2                            <----------DOF2         <---------MYB46(3)         <------ZmHOX2a(1)                           <------NtERF2        <----------DOF2    <---------RVE1(1)                                  <---------DEAR3(1)       <---------ANAC58------>ZmHOX2a(2)                                 <---------ATHB12   ---------       <---------ANAC58====================HOX2a_HOX2a                  --------->GLK1(2)   ---------   cctagtttcgcttgttggttatcgatctgatattttgaggagaaagaaatgaaattgaagtagtaagagaagcgaatcagtcggctttataaaaacgcta  16166400                                                                 ----------->ARR10                                                               <---------MYB52(1)      <---------YAB1                                          --------->TOE1(3)     --------->ARR11(3)          --------->DAG2          <---------MYB52(2)          <------------CBF     <---------ARR11(3)   *TSS  ---------->DOF2      --------->AHL20(2)   <---------AHL20(2) >ANAC58                ---------->DOF2       <-------TEIL    --------->TOE2(3)     --------->ATHB12 >ANAC58                <<<<<<<<<<<<WRKY18<---------TOE2(3)--------->MYB52(1)     <----------DOF2   aatggatgatatttgtaaaccgagtcaaaagtcaaaaagtcatcaaggttcaaaataaaacaaacgttagatttgtttaatgggctttattgggccttgt  16166500                       <---------MYB46(3)                       <------MYB83                      --------->MYB111(2)                      --------->MYB46(2)                      --------->MYB55(2)                      <---------AtMYB61                      <---------DEAR3(1)                      --------->MYB111(1)  <---------AHL20(2)                      <---------MYB46(3)  --------->AHL20(2)                     <--------P        ------->MYC3 --------->ARR11(3)                <---------MYB52(1)     <-------MYC3 <---------ARR11(3)               <-----------HVH21       <-------MYC2<---------GLK1(1)              ------>ZmHOX2a(2)       ----------->GT1       <---------------AGL15        <-----------GT1<------MYB46(1)--------->ANAC58      --------------->AGL15                  <-   --------->YAB1<-----------RAV1(2)  --------->ANAC58<---------ICU4     <---------At4g35610       --  <---------ATHB12   <---------MYB55(1)------->MYC2--------->GLK1(1)     --------->At4g35610      ---   ttctatcatttttcgatcgtcaggttggtgaatgtctggcacgtttaaattggaaatctttgctaattcaagaacagctgatttttgtaagcgggattta  16166600                                     <---------AHL20(2)                                     --------->AHL20(2)                                 -------->HAHB4                                 <---------ICU4                                 --------->ATHB12                                 --------->YAB1                                --------->ICU4                                <---------ATHB12                                <---------YAB1                               <---------TOE2(3)                                                    -                             <---------AHL20(2)                                                     -                            <---------AHL20(2)      <---------AHL20(2)                              -                            --------->AHL20(2)     --------->AHL20(2)--------->YAB1               <--          <-----------GT1 ------->TEIL         <---------AHL20(2)--------->AHL20(2)         ---------      <---------DAG2   --------->ANAC58      <----------DOF2   ----------->GT1              <--------      <----------DOF2  --------->ANAC58   --------->ARR11(3)   <---------ANAC55(2)         --------->AHL20(2) --------AHL20(2)      --------->ANAC46   <---------ARR11(3)   --------->ANAC55(2)         --------->AHL20(1) ------->AHL20(2)    <-----------GT1--------->AHL20(2)  --------->YAB1                     <---------AHL20(2) ------>YAB1    --------->AHL20(2)  <---------AHL20(2)<---------TOE2(3)                    <---------AHL20(1)   taaaaatacttttttcaattttttcacgaatttaatgattaaattatcttttatttaatgaaaacatgtaattagaaactaaaattacaaaaatttattt  16166700                                                                                  --------->AGP1                                                                                  --------->ARR14(2)                                                                                  <---------ARR11(3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                  --------------->AGL15                                                                 <-----------------AGL1                                                                 <-----------------AGL2                                                                 <-----------------AG                                                                 <-----------------AGL3                                                                 xxxxxxxxxxxxxxxx>smallRNA(s)                                                                xxxxxxxxxxxxxxxx>smallRNA(s)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        xxxxxxxxxxxxxxxx>smallRNA(s)                                                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                                 <------ZmHOX2a(1)<---------------AGL15                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   ------>ZmHOX2a(1)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)------>ZmHOX2a(2)                                        ------>MYB46(1)<xxxxxxxxxxxxxxxxsmallRNA(s) <---------HSFC1(2)         <xxxxxxxxxxxxxxxxsmallRNA(s)   ------>MYB83   xxxxxxxxxxxxxxxx>smallRNA(i) --------->HSFC1(2)      --------->AHL20(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         --------->ARR11(3) -------->ANAC58                     --------->ANAC46<xxxxxxxxxxxxxxxxsmallRNA(i) <---------ARR14(2) -------->ANAC46                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         --------->GLK1(1) -------->ANAC58                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------TOE1(3)--------->HSFB2a(2) ---------GT1                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<----------DOF2<------ZmHOX2a(2) >AHL20(2)                  <-----------GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------GLK1(1) -AHL20(2)        --------->LBD16 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------TOE2(3)<---------HSFB2a(2)   tcacccaaaaaaatagtttccgtcaaaatttttctctccaccaaattactaggatagaatggaccattctctttaaggcaacgagatccttctaaaaata  16166800                                                                                     --------->ANAC58                                                                       --------->YAB1--------->ANAC58               --------->ANAC55(2)                  <---------SPL7    <---------ATHB12               <---------ANAC55(2)                --------------->AtSPL3   <---------YAB1         --------->AHL20(2)                       <---------------AtSPL3----------------------->TaNAC69(2)       --------->ANAC58                     <-----------RAV1(1)  --------->TOE2(3)<---------ZAT18   <       --------->ANAC58                   ----------------------->TaNAC69(2) <---------ANAC58    <---       ----------->GT1                 <---------ARR11(3)        --------->TOE1(3)--------->ZAT18----   <----------DOF2                <---------HSFB2a(2)    <---------At4g35610 <---------ANAC58<------- --------->At4g35610              --------->HSFB2a(2) --------->SPL7--------->WOX13(1)      ---------   ctctgcttcaagtaaatatgtattgtctctgtttctcgcgaaatctctggtgttcgtacagctcttacctcaatcatatgcttgggcactcaaccggtga  16166900  Previous    Next  AGI:  At5g40370.1    Description:  glutaredoxin, putative. Identical to Glutaredoxin-C2 (GRXC2) [Arabidopsis Thaliana] (GB:Q9FNE2); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT5G63030.1); similar to glutaredoxin [Tilia platyphyllos] (GB:AAL04507.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutaredoxin active site; (InterPro:IPR011767); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin subgroup (InterPro:IPR0 Range:  from: 16164822    to: 16166426    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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