Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ANAC58                  <---------ANAC58              <-------MYC2         --------->YAB1                         ------->MYC3    --------->AHL20(2)         --------->ANAC46             --------->ANAC58    --------->bZIP60(1)         --------->ANAC58<---------ANAC46       <-------MYC3<---------YAB1         --------->ANAC55(2)          --------->ANAC46    <---------bZIP60(1)         --------->MYB46(3)         --------->ANAC55(1)          --------->ANAC58 ----------->HVH21         <------NtERF2         ----------->GT1 <---------ZAT6         ------->MYC2--------->ICU4      ------>NtERF2  ------         --------->ANAC58----------->GT1     <---------ALFIN1  <---------YAB1  <---------DEAR3(1)  -- -------TEIL    <-----------GT1   <-----------GT1    --------->YAB1         --------->ETT(2)<--------   gatacatctaaacgtaattttcttgttgtgttaattttacacgaacaacacgttctcatgacatgattatatgtagtatcgacggcgaaccaatatgaat  16153400                                       <---------ZAT6                    <---------ICU4                                     --------->YAB1                      --------->YAB1        ------ ->TEIL                        --------->ANAC58       <---------AHL20(1)<---------YAB1---------->DOF2 ------->At4g35610   ----------->GT1--------->ICU4 --------->YAB1       <---------ATHB12 --------->At4g35610 -YAB1 --------->GLK1(2)       --------->ANAC58  ------->TEIL --------->ZAT6      ---------->DOF2----   caactgtataatctgtattagaactgtaataccaagtaatagtgatatatgaatcatatatttcccactacttaatcatagtttgaaagaaagctcaatg  16153500                                                                          --------->ZAT14                                                                      <--------HAHB4                                                               --------->MYB52(1)              ----------->GT1                                 ------->GAMYB        ------>MYB46(1)                                      --------->MYB46(3)        ------>MYB83                                       --------->MYB52(1)      <---------MYB59                                   <---------ANAC55(2)     --------->ANAC58                                   --------->ANAC55(2)                       ---     --------->ANAC58                                   --------->ANAC58  <---------ZAT14         <--    ------->TEIL                                        --------->ANAC58<---------YAB1           ---- ----->HVH21  <---------ANAC46                    --------->ANAC58    <---------ICU4    --------->GLK1(1) ----->ARR11(3)    --------->ICU4  ---------->DOF2--------->ANAC58   <------ZmHOX2a(2)  <---------GLK1(1)   accttgaacccaacttgtgtaaatattagtccatctccaaagcccaaggcccaaggcaacgtaacagacggatcattacagtgccaagggaattcagaca  16153600       <---------ICU4      --------->AHL20(2)                       <----------DOF2      <---------AHL20(2)            ------>MYB46(1)      <---------ATHB51              ------>MYB83                                        --------->ANAC46     <---------AHL20(1)            <---------ALFIN1                                     --------->ANAC58    --------->YAB1                 --------->ANAC46                                     --------->ANAC58 ---->MYC3                        --------->MYB46(3)                       <-----------GT1         -- -----MYC3                    --------->MYB46(3)         <---------YAB1 --------->GLK1(1)         <-- ------->GT1     ----------->GT1  <---------MYB55(2)   --------->YAB1   <---------GLK1(1)         ---   cgtttaaaataattccgaattgtaagttgtgaacgacccaccatgttatcttttcatttatgattcacatggggaattcacaattctcacacgaaaaaca  16153700                           ------>MYB83                         --------->TOE2(3)                         <---------MYB59                                                    <------ZmHOX2a(1)                   --------->AtLEC2                                                 --------->ATHB12                   --------->ANAC58                                           <---------AHL20(2)----- ------->ALFIN1    --------->ANAC46                                       <-----------TBP <---------TOE2(3) -----MYC3         --------->ANAC58                   --------------->AtSPL8 --------->AHL20(2)<----- ---->MYC3  ---------->DOF2------>MYB46(1)      <-------TEIL   <---------AtLEC2    <---------YAB1   tgtgggcaaaactaaaaagacatgcaacctaattcaacaaaatgtaatggttcatatttgtacttgcatagaatgcatatataatatgatttgaggatgg  16153800                                                  --------->GLK1(2)                                                 <---------GLK1(2)                      *TSS               <-------TEIL                            --------->ANAC58                 --------->ATHB12       --------->GLK1(2)                        --------->ANAC58           --------->ANAC46       >>>>>>>ZML2 --------->YAB1                    --------->DAG2           --------->ANAC58       <---------HSFB2a(2)                          ---------->DOF2         --------->MYB52(1)       <---------HSFC1(1)                     --------->ZAT6   <---------- ------>GT1--------->ANAC58       --------->HSFC1(1)    ------->TEIL--------->TOE2(3) ----------->RAV1(2) ----MYB46(3)   --------->ICU4    --------->HSFB2a(2)<---------YAB1 >>>>>>>>>RAP2.2  -------->P   gtcaaaactccaaacgaaatgatttgagcatatgttctagagattcagtcagaatatgaatgctatacaatctaaacactataaagcaacctggtcatga  16153900                                                                <---------AHL20(2)      --------->ANAC55(2)                                  <---------DAG2     --------------->AtSPL8                                <----------DOF2   --------->ICU4  <-------   ------>ZmHOX2a(2)   ----------->GT1             <----------DOF2      ----------->GT1      -------- <---------ARR11(3)  ----------->GT1      <---------MYB52(1)   <---------AHL20(2)----------->GT1 --------->ARR11(3)  <---------ANAC46--------->MYB52(1) <-----------GT1--------->ZAT6       <-------- -HVH21        <----------DOF2 --------->AHL20(2)  <---------DAG2     <---------YAB1      --------->ATHB12   ggtgatctacgtactctctttggacgtgaaaaattatatcaacggtttgtctactttataacttttttatttatcagtaaatatggaaacattgattaat  16154000                                                                                       --------->TOE2(3)                                                                                       --------->TOE1(3)                                                                                     ------->TEIL                                                                                   --------->ZAT18                                                                                   <---------ZAT18  <------ZmHOX2a(2)                                                                <---------ZAT14  --------->CCA1(2)                                                           <---------GLK1(2) <---------ARR11(3)                                                     --------->ARR14(2) --------->ARR11(3)                                                     <---------ARR14(2) --------->AGP1                                                     ----------------->AGL3 <---------ARR14(2)                                                 <-----------------AGL2 --------->ARR14(2)                                                 ----------------->AG --AHL20(2)                         --------->At4g35610             ----------------->AGL2         <- ->AHL20(2)                    <---------YAB1          <----------DOF2  --------->GLK1(2)     <------ -WOX13(1)                  --------->TOE1(2)          <---------DAG2   <---------ARR11(1)   <-------   taagatccaagtctcttgatgtgatgagaacatatgatagctaaaccaatgcctctactttttctatctatccaaatctagattgtgcaccttaatcttt  16154100                         <---------ICU4                         --------->YAB1                       --------->AHL20(2)                       <---------AHL20(2)                   --------->YAB1                  <---------YAB1           --------->ATHB12                --------->GLK1(1)         <---------YAB1            --------->ANAC58   --------->YAB1                                              <---------WOX13(1)            --------->ANAC46   ------>ZmHOX2a(2)                                         --------->ATHB12 ----------GT1  <---------CCA1(2)         --------->ICU4                           <---------ZAT18 ----DOF2   --------->ANAC58 --------->ARR11(3)      ---------->DOF2               --------->ZAT18 --ICU4 <---------AHL20(2)   <---------ARR11(3)      --------->MYB52(1)    <-------TEIL <---------YAB1   tctacaatatttatacgcatatcataaaaatgatcttaatctacatgattagaaataaaggcaaaaacatatatagatgcaatagcgaacttgattgttc  16154200                                                                           <---------AtLEC2                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                         --------->YAB1            <---------ANAC46                             ------>ZmHOX2a(2)                 <---------ANAC58                    --                           <---------ARR11(3)                  <---------ANAC58              --------  --------->AHL20(2)       --------->ARR11(3)<-----------HVH21 <---------ANAC46              <-------  <---------AHL20(2)     <---------YAB1  --------->ZAT6        <---------ANAC55(1)----------->RAV1(1) --------->AHL20(2) --------->YAB1 --------->ZAT6            <---------AHL20(2)<------ZmHOX2a(1)  ---   atatttaattaagtctcaactaagatgatgatctctaccactatcactatcacatatgtgaaattacttgtgtatatgcaaggacaacatttgatatgta  16154300  Previous    Next  AGI:  At5g40348.1    Description:  other RNA Range:  from: 16153822    to: 16158391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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