Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <--------ATHB1                                                                     -------->HAHB4                                                                    --------->ICU4                                                       <---------AHL20(2)              <-------TEIL                                   --------->ANAC58    --------->YAB1<---------ICU4  <-------PIF5  --                       <---------LBD16                 --------->AHL20(2)            ------->PIF5  --         --------->YAB1<---------ANAC58         <-----------GT1     <---------ATHB51--------->ANAC58 --------->AHL20(2)    <---------ANAC58     <---------DAG2    --------->ANAC58    <---------ALFIN1--- ----->AHL20(2)        <---------ANAC46     <----------DOF2   --------->ANAC58  ------->TEIL     ---- -----DOF2         <---------YAB1  --------->ANAC58 <---------ICU4  <---------ATHB12--------->ANAC58   taaataaacaattagaagattattttcgggcattagaacgaaacccctttttactaattaaaacaagctaataattcaaatgtaccacgtccataaacac  16127500                                    <---------ICU4                 <----------DOF2                                --------->AHL20(2)             <---------ANAC55(1)                               --------->AHL20(2)              <---------ANAC58                            --------->ATHB12                   <---------ANAC58         <----------DOF2   ---------->DOF2   --------->At4g35610                       <---------ANAC46         ============= ---->MYB83    <---------AHL20(1)   --------->YAB1        <-----------RAV1(1)         ---------->ID1 ---->MYB46(1) --------->AHL20(1)  <---------ATHB12      <---------TOE2(3)           <-----------GT1 ------>MYB52(1)    <-----------RAV1(1)   <---------MYB52(1)   --------->ANAC55(2)  <<<<<<<<<<GT-3b - ----->AtMYB61--------->AHL20(2)<---------AHL20(2)     <---------AHL20(2)      ------->TEIL         <   caacgtaaagcccaaaatatatatgctgcatcatttaatcatcagtttgtttcaaaatttatgttgcgtcttttttatatgtatatttttctttttagat  16127600                                          <---------ANAC46                                          <---------ANAC58                                          <---------ANAC58                   --------->TGA1a    <-------GAMYB                   <---------TGA1a    <---------ANAC58      ------>ZmHOX2a(1)               <---------ANAC58                                      <--------     --------->TOE1(3)               <------MYB83                                           <--------     --------->TOE2(3)               <------MYB46(1)                                      <----------  ------>ZmHOX2a(2)--------->ANAC46 --------->MYB59                       <---------At4g35610 <---------GLK1(1) <---------O2     <---------AtMYB61       --------->HSFB2a(2)        --------->AHL20(2) ============================bZIP_DOF<---------MYB46(3)     <---------HSFB2a(2)        <---------AHL20(2) -------->ARR11(3) --------->O2 <---------YAB1<---------AtLEC2            --------->At4g35610  <----- ---------ARR11(3) ===========================MYC_MYB ------->TEIL  <----------DOF2   <---------AHL20(2)   ttgatctccttaaattgtttcacgtcgactatctatgtttggttgtgtgcatgatgcatcttctgtaagtcttttcatctcaagtttatttatttcgttt  16127700                                                  <-----------GT1                                              <---------YAB1                                             --------->AHL20(2)                                        <---------YAB1              ---------->DOF2                                 <---------AHL20(2)                 <---------AHL20(2)                                 <---------AHL20(1)           ------>NtERF2 --------->HSFB2a(2)          --------->YAB1 <---------AHL20(2)    <---------ATHB12 -ANAC58              <---------TOE2(3)<---------TOE2(3)  --------->ANAC46 -ANAC58       --------->AHL20(2)--------->AHL20(2)    <----------DOF2 -GT1    <---------TOE2(3)   <---------AHL20(2)--------->YAB1--------->DEAR3(1) -----DOF2     <---------AHL20(2)--------->AHL20(1) --------->ZAT6 --------->AHL20(2)   tatcgagaattaagaatttaaatcaacgtttttaataaattgatgattttaataacactttcgccaccaataaatcggaagaaaatgggattatatgttt  16127800                        --------->ANAC46                        --------->ANAC58                        --------->ANAC58                <---------TOE1(3)                <---------TOE2(3)               <---------DOF5.7(2)               ---------->DOF2                                     <---------TOE2(3)          <---------TOE2(3)                                  <---------YAB1 <----------DOF2          --------->MYB59<---------MYB52(2)   ------>ZmHOX2a(1)   ---------->DOF2             ------>ZmHOX2a(1)          <---------TOE1(3)    ---------->DOF2<----------DOF2<---------------AGL15           --------   caaacaatagtttaggttaaagttgcaagaaaccaaagaaaccaagtccttttgcaaacacttatttttaaagtaagtctttttctcgtcttcttcctca  16127900                  --------->ALFIN1                                                               ----                *TSS                                                                          -------               --------->DAG2                                                       ----------->RAV1(1)             ---------->DOF2                                          <---------AHL20(2)      -------         <---------WRKY18(1)   --------->At4g35610                   <---------AHL20(1)     ---------        --------->WRKY38(1)   --------->ARR11(3)    <-----------HVH21--------->AHL20(1)     <--------        --------->WRKY12      <---------ARR11(3) <---------At4g35610 --------->AHL20(2)    --------->CCA1(1)      <------------CBF  >>>>>>>>>TBF1            --------->At4g35610 <---------AHL20(2)    --------->RVE1(1) ->TOE2(3) ----------------->AGL1                --------->LBD16    --------->AHL20(2)--------->ANAC46   tttgtgtccattgaccaaaggtggaagaagaagagcttacttcatcacttccgctgtcaaacaaactcaaattaatttttaaaaacccacaaaatatcta  16128000                                                  --------->MYB46(3)                                                  --------->REM1(1)                                                ----------->RAV1(1)                                             --------->ANAC46                                             --------->ANAC58                                             --------->ANAC58                            <---------HSFB2a(2) ----->ANAC46                         >>>>>>>>>TBF1                                      --------->HSFB2a(2) -->TOE1(2)                       --------->At4g35610                            <---------ATHB12 -->TOE2(2)                       <---------At4g35610                           ------>MYB46(1) >ARR11(3)              --------->LBD16  >>>>>>>>>TBF1                          ------>MYB83 -ARR11(3)   ----------->GT1    <---------HSFB2a(2)                            --------->WOX13(1)   cgaaaatggaagaattagaaaaaacccagaaatttcagaagaagaagaagcaacaacaagagaaacaagaccagtcttcaccaatcaacttcgagatgtc  16128100                                                            ------->GAMYB                                                          ------>MYB83                                                          -------->P                                                          ------>MYB46(1)                                                         --------->MYB55(1)                                                        <---------ALFIN1                 ============                                                        --------->AtMYB61              --------->ARR14(2)                                                        --------->DEAR3(1)             --------->ARR11(3)                                                        <---------MYB111(2)            <-----------ARR10                                                        <---------MYB46(2)             <---------ARR11(3)                                                        --------->MYB46(3)             <---------ARR14(2)                                         <-----------GT1<---------MYB55(2)             ------->TEIL                              --------->MYB52(1)        <---------MYB111(1)           <---------CCA1(2)                 <---------ICU4  --------->ATHB12      --------->MYB46(3)    <---------MYB52(1)                 --------->YAB1 <---------YAB1       <-----------GT1       --------->ANAC46    <------ZmHOX2a(2)      --------->ANAC46     <---------YAB1             --------->LBD16      -----   <---------ARR11(3)      --------->ANAC58     ------>ZmHOX2a(1)         --------->LBD16------>ZmHOX2a(2)   --------->ARR11(3)      --------->ANAC58   ----------->RAV1(2)        <---------LBD16 ============   ttcaagatcatcacttcattcattaccacaaacaacgattgaatcacctcctgattcaccaaccctctcttcaatccccgatagccatggatcttctcct  16128200      --------->KAN4(2)                             <---------MYB52(2)     --------->KAN4(1)                         ----------->GT1     <---------KAN4(1)                         <---------ZAT6                  <------NtERF2     <---------ICU4                           <---------TOE1(3)   <------ZmHOX2a(1)    <---------YAB1                            <---------TOE2(3)<------ZmHOX2a(1) ==HOX2a_HOX2a      <-----------RAV1(1)  <----------DOF2 ------->GAMYB         --------->At4g35610 ->ZmHOX2a(1)    ------>ZmHOX2a(1)      --------------->AGL15--------->ALFIN1<---------WRKY12 =======================HOX2a_HOX2a<---------ATERF1(1)--------->MYB52(1)---------->DOF2  <------ZmHOX2a(1)   cacacgattattccaactccttctgtggccaagacggagactccttttagggttactaacggagaggaggagaagaaagtcagcgagagtaggagacaat  16128300                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                              <------                                                                                              -------                                <---------ANAC46                                            <--------                               ------>NtERF2                  ---------->DOF2             <---------ANAC58                    <<<<<<<<<TBF1                            <------ZmHOX2a(1)            <---------ANAC58                 <<<<<<<<<TBF1 --------->LBD16             --------->MYB59                <---------ANAC46              <<<<<<<<<TBF1  <---------LBD16           --------->ATHB12          <---------TOE1(3) <-        <----------DOF2    --------->ANAC46           <---------YAB1             <---------TOE2(3) <-   tgagaccgagcttttcttcttcttcttctactccgcgtgaatcgaaatgggcaagtttgattaggaaagctctacttggatttagggttattgcgtttgt  16128400  Previous    Next  AGI:  At5g40300.1    Description:  integral membrane protein, putative. Identical to UPF0497 membrane protein At5g40300 [Arabidopsis Thaliana] (GB:Q9FNE8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64343.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 16127916    to: 16130196    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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