Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ARR11(3)                <---------ARR11(3)                --------->AHL20(1)   --------->ARR11(3)   <---------AHL20(1)                                         --------->AHL20(2)   --------->AHL20(1)                                         --------->AHL20(1)                ----- --------->ARR11(3)                                           <---------AHL20(1)                ----- <---------ARR11(3)                                   --------->ICU4                        --------- --------->AHL20(1)          <-----------GT1      --------->At5g28300                      <--------- <---------AHL20(1) <-----------GT1              ----------->GT1                           --------->DAG2 -->DOF2        <---------AHL20(1)  --------->HSFB2a(2)  <---------YAB1 <----------DOF2  ---------->DOF2   aaaaatattttggagaaaaatatttctatattttccttctagcatttcatacagtaattctgaatataatgcttctttttttttggtattgaaaaggtaa  16125300                                                     ---------->DOF2                                                <------ZmHOX2a(1)                                               ----------->GT1                                               <---------YAB1                         --------->ANAC46     <---------TOE2(3)                      --------->ZAT18       --------->ICU4                                  <-------- ---->ANAC58          <---------ZAT18  --------->ANAC58       --------->At4g35610          <---------DAG2 ---->ANAC58    <----------DOF2        --------->ANAC58       <---------At4g35610       <-----------GT1 -->GT1        <---------ANAC58        --------->ANAC46     --------->YAB1        --------->AHL20(2) ------AtSPL8  <---------ANAC58    ----------->RAV1(1)    --------->GLK1(2)       <---------AHL20(2)   gaaaaactcaccaagttgctttagttcacgaagcctgccacaaggaattaggataaaaagaatcagcacatttctcagtctgattttaatataccttttg  16125400                               <---------ARR14(2)             --------->At4g35610                               --------->ARR14(2) ------->TEIL--------->ZAT2                   <---------ICU4              <---------ATHB12      --------->MYB52(1)   --------->ZAT18--------->AHL20(2)         --------->WOX13(1)  <-------TEIL   --------->At4g35610<-----------GT1     <-----------HVH21   <---------At4g35610          <--------- --DOF2       --------->MYB46(3)   --------->At4g35610     ---------->DOF2  --------->AHL20(2)   aaatgagcacaatccaacaactaattacctttggaactgctcagtgtcaatgaattttaaacaaagctgcataacagattaaacaatgagttttcacaga  16125500                                       ----------->GT1                                      ----------->GT1                                <---------------AGL15                                --------------->AGL15                               <-----------------AGL2                               ----------------->AG                               <-----------------AGL1                            --------->GLK1(2)                               ----------------->AGL1                 --------->ANAC46                               <-----------------AG                   --------->bZIP60(1)                               ----------------->AGL2                 <---------bZIP60(1)                               ----------------->AGL3               <-----------GT1                               <-----------------AGL3               --------->YAB1              -----                             --------->ANAC58                  <---------ARR11(3)--------->ARR14(2)                             --------->ANAC58                  --------->ARR11(3)<---------ARR14(2) --GT1   <---------ANAC46    --------->ANAC46           ---------->DOF2         <---------GLK1(1)   cttatcaagtggtttagagcatttgaaattcaagccaaaattggaaaaactctaaatacaaagaagataatcacatcacagaaaatccgaaccatttgga  16125600                                                     <---------ANAC58          <-------TEIL                                                     <---------ANAC46        --------->GLK1(1)                                                     <---------ANAC58     --------->LBD16                            <---------YAB1    ------->TEIL              <---------LBD16                         <------ZmHOX2a(2)    <---------TOE2(3)        ------->TEIL      <------NtERF2                       <------ZmHOX2a(1) <---------AtLEC2             <---------ARR14(2)--------->LBD16                  --------->MYB52(1)--------->HSFC1(2)            <---------At4g35610  --------->LBD16 ----->DOF2     <---------MYB52(2)  <---------HSFC1(2)            --------->At4g35610 <---------LBD16   aagtgagaagaagagaaaactaacaggatcaagatagatgtttccatgaacgttgtcgtggacatgtttgctgaaccggagttcattcgccggaaaacaa  16125700                                               <----------DOF2                                      <                                              <---------DAG2                                        -                                             <------NtERF2                                       ----                                        <---------TGA1a                                         <----                                        --------->ANAC46                                        <----                                        --------->O2                                           ------                                        ==================bZIP_DOF        ----------->GT1      <-----                                        --------->TGA1a                --------->GLK1(2)       <-----                                      <-----------GT1                 ------>MYB46(1)          ------                                 <---------CCA1(1)                    ------>MYB83             ------       <---------ICU4            <---------RVE1(1)                  <---------MYB59            ------       --------->ATHB12         --------->ARR11(3)                  --------->TOE2(3)          ------      <---------YAB1            <---------ARR11(3)           --------->ANAC58                  ------  --------->ARR11(3)      --------->ZAT6<---------O2         --------->ANAC58   --------->YAB1 ------  <---------ARR11(3)     <---------ATHB12   ------>NtERF2 --------->WRKY18(1)  --------->ZAT6<-------   ctcaggtcttcattgcaatactctcccatcactagatatttcacgtcgcctttttttttggtcaagaaaacctaatctgtaatactaatactcgcacacg  16125800      --------->AHL20(2) ---------At4g35610 -------->At4g35610 ----->TGA2(2) -------TGA1                                           <---------GLK1(2) -------HVH21                                          <---------ARR11(3) --->bZIP60(2)                                         --------->ARR11(3) ----O2<---------AHL20(2)                              --------->ARR14(2)              --------->MYB52(1) ----TGA1a<---------ARR11(3)                           --------->ARR14(3)          --------->ANAC58 --->TGA1a--------->ARR11(3)                   <---------ANAC46                  ---------->DOF2 --->O2--------->AHL20(2)                    --------->MYB52(1)         --------->AHL20(1) --->ANAC58                               --------->At4g35610           <---------AHL20(2) --->ANAC55(1)                --------------->AGL15    <---------ARR14(3)   <-----------GT1 --->ANAC58                   <---------------AGL15  ----------->ARR10  --------->AHL20(2) --->ANAC46   --------->MYB52(1)          <---------At4g35610           <---------AHL20(1) --ALFIN1 <-----------ARR10--------->GLK1(2)----------->HVH21      ------------>CBF--------->ANAC58   tcagcaaattaaaatctaactgttgaaagtttctgatatttgtaatctgacggacaagattttcttcatgtcaatttattacccaaagcaaactgtgtct  16125900                                                 <----------DOF2                                                 <---------------AGL15                                                <-----------------AGL3                                                <-----------------AGL2                                                <-----------------AGL1                                               ------>MYB83                     <-----------GT1           ------>MYB46(1)               --------->LBD16         --------->ANAC46              --------->LBD16        --------->TOE2(3)       ------>ZmHOX2a(1)             --------->LBD16  --------->HSFB2a(2)--------------->AGL15         <------------CBF          ------>MYB46(1)     <---------HSFB2a(2)<---------DAG2               --------->ATHB12     <-          ------>MYB83    <----------DOF2    <---------MYB59 ------------>CBF<---------YAB1  --------   gtttcgcttaccttccccgagttaaacactttgtagaaaccacaaaacctactttttttggtcctcaatattgaatgttgttattggtaacacatcaaag  16126000                                                     --------->LBD16                          ---------->DOF2           <---------HSFB2a(2)                  --------->ARR14(2)                --------->HSFB2a(2)          ====================                  <---------ARR14(2)         <---------AHL20(1)                  <-----------------AG              <------NtERF2                  <---------ARR11(3)                 <xxxxxxxxxxxxxxxxsmallRNA(i)             ----------->RAV1(1)             --------->AHL20(1)                <----------DOF2    ---            <---------RAP2.6(2)              --------->ARR11(3)                xxxxxxxxxxxxxxxx>smallRNA(i)           <---------At4g35610    <------MYB46(1)  <---------LBD16            xxxxxxxxxxxxxxxx>smallRNA(i) <---------AHL20(2)  ----------->GT1       <---------KAN4(2)----------->GT1   xxxxxxxxxxxxxxxxxxxxxxx ---------DOF2--------->At4g35610 <------MYB83     <---------ANAC46         xxxxxxxxxxxxxxxx>smallRNA(i) -->DOF2   --------->At4g35610<------ZmHOX2a(1)   <---------LBD16  --------->AHL20(2)        --------   tctttaatggtttagcggcagaaacgataaaaggataggtttgggaatatttttcgggaaaaatgtcaaaaaaatcgcgaactttcaaatttgggatgaa  16126100                                                                                                 <---                                                                                                 xxxx                                                                                                xxxxx                                                                                               <-----                                                                                             xxxxxxxx                                                                                            xxxxxxxxx                                                                                           <xxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                         <xxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                 <---------------AGL15                                                                                 --------------->AGL15                                                                                ----------------->AG<                                                                                <-----------------AGL1                                                                                ----------------->AGL2                                                                                <-----------------AGL2                                                                                ----------------->AGL1                                                                               xxxxxxxxxxxxxxxx>smallRNA(i)                                ---------->DOF2                                <-----------------AG <  --------->YAB1               ------>ZmHOX2a(1)          --------->ICU4       <xxxxxxxxxxxxxxxxxxxxx ================================================================================================MADS_MADS ------->DOF2            <---------AHL20(2)           --------->AHL20(2)       <-----------------AGL1 >smallRNA(le3)         --------->AHL20(2)        <---------YAB1              <---------WRKY18(1)<xxx --->GT1                <---------AHL20(2)     <----------DOF2                xxxxxxxxxxxxxxxx>smallRNA(i)   aaaagcataaatattcaagaagacaattaaatcctaaagtttagtttgacttttgataaaatgatcaagttttgttaacttgaccatttagggcatgtcg  16126200  Previous    Next  AGI:  At5g40290.1    Description:  metal-dependent phosphohydrolase HD domain-containing protein. similar to metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G40270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14782.1); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain Metal-dependent phosphohydrolase, HD region, subdomain (InterPro:IPR006674) Range:  from: 16122487    to: 16125729    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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