Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ------>ZmHOX2a(1)                                                                                   --------->TOE2(3)                            --------->YAB1                                       ------>MYB83                            --------->AHL20(2)                                   ------>MYB46(1)                      --------->ANAC46                                          <xxxxxxxxxxxxxxxxxxxx             <---------MYB52(1)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <-------GAMYB  <---------ATHB12                         <---------HSFC1(2)           --------------->AGL15                                    --------->HSFC1(2)           <---------------AGL15                                    --------->HSFB2a(1)    <---------ATHB12          ----------------->AGL2                                <xxxxxxxxxxxxxxxxsmallRNA(i)  -------          ----------------->AG                                <------ZmHOX2a(1)--------->AtMYB61          ----------------->AGL1                           xxxxxxxxxxxxxxxx>smallRNA(i)  --------->WOX13(1)        <-----------GT1    <---------ATHB51               --------->TOE1(2)    <xxxxxxxxxxxxxxxxxxxxx    ------->TEIL      --------->ANAC58                 ------>MYB46(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->ANAC55(2)  --------->ANAC58 ---------->DOF2 ------>MYB83 <---------HSFB2a(1)<---------YAB1   tttatgtatttttccgttaagagcaagcaataatatagccctaaagaaatatagacctagcctaggaagaagtttctaagaccatccttatcaatgaact  16118200                                             --------->TOE2(3)     --------->DAG2                         <---------ICU4    ---------->DOF2                 <---------YAB1 xxxsmallRNA(i2)                    ----------->GT1                          ----------->GT1 >TEIL               <---------YAB1 --------->ICU4                         ---------->DOF2   -------- xxsmallRNA(se3)   --------->YAB1  <---------TOE2(3)              ---------->DOF2            <-------   cttacataaagttctaaacaattttgatatacaaaataatgtttaaacattagaatggctcttacaaaaaaagagaataaagaaaaaaaaaacttagcta  16118300                                                              --------->AHL20(1)                                                              --------->ARR11(3)                                                              <---------AHL20(2)                                                              <---------AHL20(1)                                                            <---------AHL20(1)                                                            <---------AHL20(2)                                                           --------->YAB1                                                         <---------AHL20(2)                                                         --------->AHL20(1)                                                         <---------AHL20(1)                                  <---------AHL20(2) <---------AHL20(2)                    ------->GAMYB                                  --------->AHL20(2)--------->AHL20(2)                    <---------MYB111(2)                              <---------AHL20(2)<---------AHL20(2)                <------------CBF                             <---------AHL20(2) --------->AHL20(2)              <---------ARR11(3)                         <----------DOF2        <---------AHL20(1)<---------YAB1--------->ARR11(3)       <-----------GT1   <---------DAG2    <---------YAB1--------->AHL20(2)    --------->YAB1      -- ->At4g35610         --------->ZAT18    <---------YAB1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->MYB46(3) --At4g35610         <---------ZAT18 <---------AHL20(2) --------->YAB1        <---------YAB1    <----   agagccatttttcatttcttaagcacacttttttatttttttattcttattttatttaatataatattttgatagttcttatgatattgttaacaaccta  16118400                                                <------MYB46(1)                                       ------->TEIL                                    <---------ATHB12    <---------ANAC58                                ------------>CBF<------MYB83                             --------->AHL20(2)--------->MYB59        <-----------GT1     <------ZmHOX2a(1)  ----------->TBP--------->GLK1(2)<---------ANAC58   <---------TOE2(3)    --------->AHL20(2)     <---------AtMYB61    --------->YAB1                  - ------->YAB1           <---------YAB1 <---------ARR14(2)  --------->MYB52(1)                  <----- --------CBF        --------->TOE2(3)  --------->ARR14(2) ----------->HVH21<----------DOF2    -------   ttgataaggatgctctaactaatcttataaataaaacaatgaatctggtttggtctgggcgtaacagaaattatactcttttttttttttgtcaagagga  16118500                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                          --------->MYB52(1)                                                                        <---------MYB59                                                            --------->TOE2(3)                                                            --------->YAB1------>MYB46(1)                                                            --------->TOE1(3)                                                          <---------ARR11(3)                                                          --------->GLK1(2)                     -----                         --------->TOE2(3)                <---------ARR14(2)   <---------MYB52(1)<---             ----------->RAV1(1)               <------------CBF      ------>MYB46(1)            -----          --------->ANAC58                   --------->AHL20(1)      ------>MYB83           <--------          --------->ANAC58           ----------->GT1      --------->ARR14(2)  ----------->GT1 <------  <---------YAB1        <---------ICU4       --------->AHL20(2)      --------->MYB52(1)    <---------ARR14(2) -------->YAB1      --------->AHL20(2)       <---------AHL20(2)    <---------MYB59         --------->ARR14(2) -ZmHOX2a(1) --------->MYB52(1) <---------ANAC46         <---------GLK1(2)------>MYB83   --------->LBD16 ---->GT1 --------->ANAC46  ---------->DOF2 --------->AHL20(2)     --------->AtMYB61   <---------LBD16   aattatactaagaagcaacagattaaacattaaagcgtatagtaaaattaattgtttgagaatcttaaaccaaaccgaaccggtattaaaccggaaccaa  16118600                                                                           --------->ZAT18                                                                           <---------ZAT14       <---      --------->YAB1                                                       --------->ZAT14     ------      --------->AHL20(2)                                                   <---------ZAT18    <------     <---------ATHB12                                                     --------->ALFIN1--------->GLK1(2) ------------>CBF                                                --------->WRKY12         <---------ARR14(2) ->MYB46(1)                  ------->GAMYB                       --------->WRKY38(1)      --------->ARR14(2) ---------CBF              -------->P              <---------ZAT14      <---------ANAC46  ------->TEIL ->MYB83                  <-----------GT1         --------->ALFIN1<---------WRKY18(1)     <---------ARR11(1) ---------AGL1--------->At4g35610               --------->ALFIN1 ----------->HVH21       <---------ARR14(1) ---MYB59     <---------At4g35610  --------->ATHB12--------->REM1(2)<---------LBD16   <--------------   attggcaatgaaatttagatgccagtagtaacccgcttgattcgtttgaagtgtgtagggctcagacttgaccggagtggactcaatcggcgaatctgtc  16118700                                                                --------->At4g35610        --------->LBD16  <------NtERF2                        <---------WRKY12       <---------O2    <---------ANAC46                       ---------->CDC5      <---------LBD16  <---------DEAR3(1)              ------->GAMYB --------->ANAC58    <---------ARR14(2)<------NtERF2                   <------------AtMYB77    --------->ARR14(2)------>NtERF2                 --------->MYB52(1)   <------ZmHOX2a(1)  --------->ATERF1(1)         <---------MYB59    --------->ANAC58  ----------->HVH21   <---------LBD16          --------->ANAC58 <---------At4g35610 ------LBD16         <---------ATERF1(1)       --------->ANAC58 <------NtERF2                     --- ----->HVH21        <---------DEAR3(1)    <----------DOF2     <---------WRKY38(1)            -------- -----HVH21        <---------LBD16     --------->ARR11(3)   <-----------HVH21    <---------ANAC46 <-- -------WRI1      --------->ANAC46     <---------ARR11(3)<---------MYB52(1)   <-----------RAV1(1)<---   acggaggacacggggaatcaacgcggcggagagtgatggaagagctttcaagcctaaccgtgagtcagcgcgagcaatttctggtggagaacgatgtgtt  16118800       <---------ICU4       --------->YAB1       <--------HAHB4      --------->O2      <---------AHL20(2)   <---------O2      <---------YAB1    --------->DEAR3(1)   ------>ZmHOX2a(2)    ----------->HVH21                   <---------ARR14(2)  <------ZmHOX2a(2)    <------NtERF2                        --------->ARR14(2) <---------ARR14(2)   <---------ATERF1(1)                <---------ANAC55(2) --------->ARR14(2)   ------>NtERF2                      --------->ANAC58 <---------ARR11(3) --------->ATERF1(1)                  --------->ANAC58 --------->ARR11(3)------>NtERF2                         --------->ANAC55(2)                  ------- ------>HSFB2a(2) --------->ANAC46                     --------->MYB52(1)                --------->At4g35610 ->ALFIN1 <---------AHL20(2)--------->HSFC1(2)      --------->At4g35610                ------>ZmHOX2a(2) -------HSFB2a(2) --------->ANAC58                  <---------At4g35610              --------->ARR11(3) ------LBD16      --------->ANAC58          <-------TEIL<---------LBD16              <---------ARR11(3)   cgggatctataattacttcgacgccagcgacgtttctactcaaaaatacatgtaagctcacggatttgattttctagttttcttcatgatctgatgaatt  16118900                                                                              <-------TEIL                  <---------AHL20(2)                                         --------->GLK1(2)                  --------->AHL20(2)                                        <---------ARR14(2)                  --------->ATHB51                                   <------ZmHOX2a(1)           ---------->DOF2                                         <---------TOE2(2)    <---------ANAC46                                               <---------TOE1(2)    <---------ANAC58                      <-----------------AGL1  ------>ZmHOX2a(1)      --------->ANAC58    <---------ANAC58<---------YAB1   ------->TEIL                --------->TOE1(2)       --------->ANAC58 >TEIL <---------ANAC46    --------->ETT(2)                      --------->TOE2(2)     --------->CCA1(2)   ttagtagcgtcgtgaaagaattattttcgtcgatagatgaatcttactgatatggaagttgttctatcctaggatggagattcagcgagataagcaattg  16119000                                <---------At4g35610                                <------NtERF2                                --------->LBD16                             <---------ANAC58                              <---------LBD16                               <---------ANAC58                           <------MYB83                                <---------ANAC58                       <---------At4g35610                             <---------ANAC58                       <------NtERF2                                  --------->ATHB12                       --------->At4g35610                           <---------YAB1                       --------->ZAT2                             --------->ICU4                  <---------TOE2(3)                             <---------bZIP60(1)              ----       <---------YAB1  <---------ZAT2        ------>ZmHOX2a(1)  --------->bZIP60(1)         ------->TEIL     --------->At4g35610   <------MYB46(1)  --------->TOE2(3)----------->HVH21         <---------AtLEC2   gattatctgatgaaaggcttaaggcagcttggtccgcagttttcttccttagatgctaagtaagtgacatgatgcttggcttcttgttttcatgaatttc  16119100  Previous    Next  AGI:  At5g40280.1    Description:  ERA1 (ENHANCED RESPONSE TO ABA 1); protein farnesyltransferase. Identical to Protein farnesyltransferase subunit beta (FTB) [Arabidopsis Thaliana] (GB:Q38920;GB:Q38916;GB:Q9LLE9); similar to ATGGT-IB (GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT), CAAX-protein geranylgeranyltransferase/ protein heterodimerization [Arabidopsis thaliana] (TAIR:AT2G39550.1); similar to farnesyltransferase beta subunit [Nicotiana glutinosa] (GB:AAB38796.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330) Range:  from: 16118619    to: 16122189    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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