Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                      --------->AHL20(2)                                       <-----                               ----------->GT1                                                -------                         <---------AHL20(2)                                                  <-------                      --------->AHL20(1)                                                  <---------MYB52(1)                      --------->AHL20(2)        <---------------AGL15                --------->ARR14(2)                      <---------AHL20(1)        --------------->AGL15                <---------ARR14(2)    --------->AHL20(2)<---------ARR11(3)   <-------TEIL                         ----------->RAV1(1) -->LBD16     <---------WOX13(1)      --------->YAB1 ---------->DOF2    <----------DOF2 ----------->GT1   attcaaaaaaatagagattggcaatattttagtgtgtgaataatattcatccctaaaaagaagtcatctttcgactttgtggcaacagttctgttattaa  16116900                                             <---------AtMYB61       <---------ANAC58       --------->TOE2(3)                                                    -- --------->ALFIN1       --------------->AtSPL8                                                     <- --->AHL20(2)           <---------------AtSPL3                                                 <----- ----AHL20(2)           --------------->AtSPL3<------MYB83  --------------->AGL15    <---------TOE1(3) -->YAB1 ----------->HVH21    --------->TOE1(3) --------->ALFIN1                     <---------TOE2(3) --YAB1<---------ANAC58 <---------------AtSPL8<------MYB46(1)             <----------DOF2   <--------   aatgtgtgagcgtgacatattttgaagaggtacctcaacaaaatcggaaggtgtctcattttcttctatcggaaggctttctcgttgaaggtagtcgttg  16117000                                                                                                   <-                                                                                                -----                                                                                                -----                                                                                                -----                         <---------At4g35610                                                  <------ ------->At4g35610       --------->At4g35610                --------->YAB1                    ------- --------At4g35610     --------->ZAT18                 --------->ZAT14                        <------ ----REM1(1)           <---------ZAT18            --------->MYB46(3)          ----------->GT1 <------ -MYB46(3) <---------TOE2(3)                     >>>>>>>>>>>>>>>>>LFY  ----------->GT1       --------   tagctgaaaaattaagaaaacctagtgagctcttcatgtattcaaaaattcaaccagtgtaatcaaactcaagaggtaaatagttaaaatcccataccaa  16117100  --------->REM1(2) --------ANAC46              ----------->GT1                                           >>>>>>>>>>>>>> ->MYB83                   ---------->DOF2                                            <-----------GT1 ---->MYB52(1)          <-----------GT1                                            --------->YAB1 ->MYB46(1)         ------>MYB46(1)                                               --------->AHL20(2) ---MYB46(2)        ------>MYB83                                                  <---------AHL20(2) -->AtMYB61       --------->TOE2(3)                   <---------YAB1         --------->At5g28300 ---MYB59         <---------MYB59 ---------->DOF2    --------->YAB1         ----------->GT1        -- ---MYB111(1)    --------->ANAC55(2)              ----------->GT1          --------->ZAT6    <------- --------->AGL1  <---------ANAC55(2)    <---------MYB52(1)       ---------->DOF2 --------->ICU4  ----   accgtgtaatctatgcaatacctaattaacaaagttaaaagcgttagtctagcagtaatattgtatcaaaagctctaacagtaattaataaccagtgtca  16117200                                               <---------AtMYB61                                            ------>ZmHOX2a(1) --------->ALFIN1                                            <---------HSFB2a(2)                                            --------->HSFB2a(2)  <---------RAP2.6(2)               <-                                           <---------LBD16  <---------ANAC46   *TSS                -- >>>LFY                            <---------ANAC58<---------ANAC46           <---------ANAC46     -- ------->ANAC46                  <-----------GT1  --------->ALFIN1            ----------->GT1-------- ----HVH21                       <---------AHL20(2)<---------ANAC58    --------->ALFIN1    ---------- ----->At4g35610    ----------->GT1<---------ANAC58<---------ANAC58 <---------DEAR3(1)  --------->ANAC46   ccagaaacaaatgtcaataacatggaaaattgaatttacttgagtcctggaggtcgtggacgtcgtggaggctgtggacgtcgtgaatacacataaagaa  16117300                <---------ARR14(2)                  --------->ICU4     <---------YAB1                             --------->At5g28300        <---------TOE1(2) --------ARR11(3)         <---------MYB52(1)   ----------->GT1         --------------->AtSPL3 ------->ARR11(3)     <---------At5g28300    ------>MYB83----------->GT1--------->YAB1 ------->GLK1(2)--------->ARR14(2)           ------>MYB46(1)       <---------At4g35610 --->GT1   --------->AtLEC2            <---------At4g35610         ------------>CBF              <--- >DOF2--------->YAB1 <-----------GT1 --------->ANAC46---------->DOF2   <---------ATHB12         -----   aaatcttataatcgtgcaaatattcaccgttcttcttatacagcacctacggtaataaagagtttattcagcaatcgtacattcaaattgaaacttagat  16117400                    <---------MYB52(2)                    <---------MYB59                    <------------MYB.PH3(2)               <---------ICU4                                  --------->ANAC58               --------->YAB1                                  --------->ANAC58            --------->YAB1                                <---------At4g35610                    ----     <---------AHL20(2)                                <---------MYB52(1)                        ----    --------->AHL20(1)                                --------->TOE2(3)                        ------    <---------ARR11(3)                     <----------DOF2--------->At4g35610                  ------    <---------AHL20(1)--------->MYB52(1)  --------->TOE2(3)  --------->At4g35610              ------- ----TEIL <-----------GT1          <---------ZAT6 <---------ANAC58                            ------- ---->CCA1(2) <---------YAB1 <-----------GT1      <---------ANAC58---------->DOF2             <------   acactatatatttttcatcataactaactataaactagtctaaaccttttttgcttcgttagcagaagcaaagtcaacaaggccatagcacctatggata  16117500       <---------ARR14(2)      --------->At5g28300      <-------GAMYB     ----------->GT1     <---------DEAR3(2)     <---------MYB46(3)    <---------RAP2.6(2)    <---------ANAC46    <---------DEAR3(1)  ------------>AtMYB77                                                        ----------->GT1 ----->ANAC58                                                                <---------TOE2(3) ----->ANAC58                                                                --------->MYB59 --->CCA1(2)                                                        --------->MYB52(1) --->ARR14(1)           --------->ANAC58           --------->ARR11(3)    <---------ZAT6     --------- -->ARR14(2)            --------->ANAC58    <----------DOF2       --------->MYB46(3)      --------->WOX13(1) -->ARR11(1)  --------->DAG2             <---------ARR11(3)       <---------MYB52(2)  --------->RVE1(1) ---ARR14(2) ---------->DOF2            <---------GLK1(2)    ----------->GT1 <---------TOE1(3) ------   cgcttggcggttacaaaaagtcgaacacgaacaacttctccagcatctttgaagaaattgatgctgtaacaaacagtgtaaggtaaaaatatcagtcatg  16117600                                                                                                -----                                                                                                <----                                                                                                <----                                                                            ---------->DOF2     <----                                        <---------ARR14(2)                  =========================                                        --------->ARR14(2)        --------->CCA1(2)         <--------        ---------->DOF2                <---------CCA1(2)         <---------ARR14(2)   <----------DOF2 >WRKY18(1)              --------->ALFIN1     <---------RVE1(1)  --------->ARR14(2)   =============== --->AtLEC2 --------->ALFIN1         --------->ANAC55(2) <---------LBD16   --------->AHL20(2)   -----   ctcagagaaggaaagtggagattgaagatggtgctacttacatatctgatattttagtttggggagggatatggccattaaagagcgtcttttttgtcac  16117700                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             <-------GAMYB                                                                            --------->MYB55(2)             <---------O2                                                   <------MYB46(1)             <---------TGA1a                                                <---------MYB46(3)        ------->GAMYB                                                --------->ARR14(2)   <----------       --------->MYB46(3)                                            <---------ARR14(2)  ------>ZmHOX2a(1)     <-----------GT1                                                 --------->GLK1(2) ----------->RAV1(2) ---->At4g35610                                                     <---------GLK1(1) =============== -----O2===============MYC_MYB                                      --------->GLK1(1) ------>ZmHOX2a(1) -----ZAT2   --------->O2     --------->GLK1(2)             <---------ARR11(3)    <-----------GT1 -----At4g35610              <---------GLK1(2)              --------->ARR11(3) <---------MYB46(3) ======================bZIP_DOF      <---------WOX13(1)    --------->RVE1(1)--------->MYB52(2) ---HVH21    --------->TGA1a <---------ARR11(3)            --------->CCA1(1)<------MYB83 ============ ======================bZIP_DOF --------->TOE2(3)--------------->AtSPL8    <---------AtMYB61      <-- ------>RAV1(2)       --------->At4g35610        <---------------AtSPL8   <---------MYB52(1)  <------   ctggatttaacagccaagtgtgttagcacaagattcttaattgaacagaaatttgtacaaaatatctagcaaatccgttggttgtttcctcctgttacat  16117800  Previous    Next  AGI:  At5g40275.1    Description:  other RNA Range:  from: 16115418    to: 16117279    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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