Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                            <--------                                                                                         <---------YAB1                       --------->YAB1                                                 <---------YAB1                     <---------YAB1                                                 --------->YAB1                    --------->TOE2(3)                                               <---------ICU4                   --------->YAB1                                                   -------->ATHB1                   <--------HAHB4                <---------AHL20(2)                <---------AHL20(2)             --------->ZAT6                <---------ANAC46                        --------->ICU4          <---------AHL20(2)              --------->LBD16                          --------->AHL20(1)         --------->AHL20(2)               ------>NtERF2                            <---------YAB1       --------->ARR11(3)               <---------LBD16                            --------->AHL20(2)       <---------ARR11(3)          <----------DOF2         ---------->DOF2       <---------ICU4 ------->ANAC46   <---------YAB1<-----------GT1 --------->AHL20(2)          <---------AHL20(2)   ----   caagtcaaagatttaatactatcattaatagttttttctttctccgcgtataaaattgttttaaagtgatggaactattttaaaaattattatgctttat  16106600                                                                    --------->LBD16                                                                   --------->HSFB2a(2)                                                                   <---------HSFB2a(2)                                                                   <---------ANAC58                                                               <---------ANAC58                                                           <----------DOF2                      <----                                                        ---------->ID1                          -----                                                  <----------DOF2  <---------ANAC58            ------                                        ------->GAMYB  <-----------GT1                 <-----------GT1                       <----------DOF2--------->At4g35610  ------>ZmHOX2a(1)      <---------RVE1(1)                  --------->KAN4(2) --------->ETT(2)  <-----------GT1             <---------CCA1(1) --DOF2         ------->TEIL   <---------ANAC58   <---------DAG2   <---------ANAC46 <---------YAB1 -DAG2        <---------ZAT18  <---------ANAC58<-----------GT1 <---------ANAC58  <---------ARR11(3) ----->YAB1---------->DOF2   <-----------GT1  --------->AHL20(2)  <---------LBD16--------->ARR11(3)--   caaaattagacattaatgcacattccttttttttcttgtcaacagaaattaactttttatccttttcttgcggaagaaaatcagatattataccctaaga  16106700                                                            -------->HAHB4                           <---------ZAT6                  <---------YAB1                      <------MYB46(1)                      --------->ICU4                      <------MYB83                     <---------ARR11(3)                <---------AHL20(1)                     --------->ARR11(3)                --------->AHL20(1)          >>>>>>>>>>>>>AGL25                --------->AHL20(2)       --------------->AGL15            --------->AHL20(2)           <---------------AGL15                                    ---           <---------AHL20(2)           <-----------------AGL2                                   ----   ----------->GT1   --------->MYB59    ----------------->AGL2                                 ------ -----ARR11(3) <---------AHL20(2)       ----------------->AGL3 <---------ICU4                -------- ---->ARR11(3) --------->AHL20(2)       ----------------->AGL1<---------YAB1       --------->YAB1<--- --->YAB1  --------->AHL20(2)   ----------->GT1    ---------->DOF2           ----------->GT1 -------- ------->GLK1(2)<---------AHL20(2)      ----------------->AG--------->YAB1  ----------->GT1 ---------   taatctggtcaaaataaataaatttggtagtgtttggataataccaaaaatagaaaagataatgataatttccaaaaaatgtttaaaataacaaaaataa  16106800                                              --------->AHL20(2)                                              <---------AHL20(2)                                              <---------ICU4                                             --------->ICU4                                          <---------ATHB51                                          --------->ICU4  ---------->DOF2                         <---------AHL20(2) --------->AHL20(2)                       --------->AHL20(2) <---------AHL20(2)                  --------->ANAC58 ------>YAB1                         --------->ANAC46 ----->ICU4                          --------->ANAC55(2)          --------->LBD16 --->YAB1                            --------->ANAC58        --------->KAN4(2) ->AHL20(1)                          <---------ANAC55(2)    <---------ICU4 ------YAB1                        <-----------GT1      <---------YAB1          --------->GLK1(2) ->AHL20(2)--------->YAB1    --------->DAG2  <---------YAB1<---------YAB1       <---------ARR14(2) >YAB1   --------->GLK1(2)  ---------->DOF2<---------ICU4--------->YAB1     <------ZmHOX2a(1)<-------   taataaaagagaatcataagttgataacaaaaaagtattacgaaataattaatacattatgataattccccaagtttaggagaatattgactccttgact  16106900                                                                                       <------MYB46(1)                                                                                       <------MYB83                          <---------ARR11(3)                                          <---------TOE2(3)                          --------->ARR11(3)                  --------->ANAC55(1)     *TSS             --------->YAB1         <---------CCA1(2)         --------->ANAC46        --------->MYB59          <---------CCA1(2)--------->RVE1(1)      ----------->TBP        ---------->DOF2 --WRKY18(1) --------->TOE2(3)    <---------CCA1(2)           --------->YAB1    ------------>CBF   <-   caaacgtctctcttatcttaatctctaaaatctctcttatctctctctctctatatatacacacacataatacccaaacgctctcaattaggttttcttc  16107000                                                                                                 ----                                                                                               ------                                                                          --------->AtLEC2     <-----                                                                       <---------MYB46(3)     <------             --------->ATHB12              <----------DOF2            <--------P            ---------         <<<<<<<<<TBF1                     <---------DAG2           --------->ATHB12   --------->MYB52(2) --------ALFIN1                  --------->WOX13(1)            <---------AHL20(2)     <-------TEIL   tacacttgttcttcttcatttgctctcttcttcatcaatctctctctttttgtaaacggcgattttaaaatggttgatgcaaaacaagttcgtttcatca  16107100                                                --------->ANAC46                                                --------->O2             <---------ARR14(2)                                                <---------TGA1a          --------->ARR14(2) ----->At4g35610                                --------->TGA1a      ------>ZmHOX2a(2) --->ATHB12               <----------DOF2       <---------O2        --------->At4g35610 ----ICU4                 ================================bZIP_DOF  <---------At4g35610 ---YAB1     <-----------GT1                    ===============================================bZIP_DOF >YAB1       --------->YAB1              <---------YAB1            <---------AGP1   <----------DOF2--   tcggagttatcggtataacaatctcttcctttccctcatcgttctgattcacgtcgtagttgcattgttgatctgaatccgaagcgtttttttgttatcg  16107200                               --------->ARR14(2)                               <---------ARR14(2)                              --------->At4g35610                              <---------At4g35610                                         ===========                       <---------REM1(1)                                                  ------>ZmHOX2a(2)                     <---------ANAC46                                             --------->ATHB12                     <------MYB46(1)                                         <----------DOF2             <-----------------AGL2                   <---------WOX13(1)     <---------DAG2           <-----------GT1 <---------At4g35610      --------->ATHB12       --------->At4g35610         <XXXXXXXXXXXXXXXXXXXMIR158A               <-------TEIL --------->GLK1(2)<---------YAB1         <XXXXXXXXXXXXXXXXXXXMIR158B <---------ARR14(2)      <---------YAB1<---------At4g35610    --- ---->ZmHOX2a(2)     <------MYB83    --------->ARR14(2) --------->YAB1     <------NtERF2 <---------At4g35610   atcgcttatgttttatctacatttggtgtagcagatgcgaaactgattttagcttcattgatcacgattctaatggcagctttatgatttgatctgattc  16107300                                <---------CCA1(2)              <--------P      --------->YAB1    <---------ANAC58         <---------AtLEC2    <---------YAB1 <----------DOF2 <---------TOE1(3)      <----------DOF2   <----------DOF2          <---------ARR11(3)  <---------ANAC58     --------->AHL20(2) ====HOX2a_HOX2a            --------->ARR11(3)  <---------ANAC46     <---------AHL20(2) --->ZmHOX2a(1)            --------->YAB1   <---------DAG2  <---------TOE2(3)<---------MYB46(3)   ctaagcttttttcatggtagattaatcgatgatcatatcgctcatgcttttcgtgtgtgtttaagcttgattttaatggtggatgcttttttggtttgga  16107400                                            --------->KAN4(2)                                       <---------ZAT6                                <---------AHL20(2)                 <-----------GT1                                --------->AHL20(2)                <---------AHL20(2)   <------ZmHOX2a(1)                               <---------WOX13(1)         <-----------GT1             --------->ANAC58                 ------>ZmHOX2a(2)   ----------->GT1    <---------WOX13(1)            --------->ANAC58          <----------DOF2 --------->ANAC55(2)      --------->ANAC55(2)       <----------DOF2   atttggctatagcttttgatctgtgtttatgtgattaattagtgaaaattctcatgtgattaacaaaatttatctctcggtttaatgcaggaaatgttat  16107500  Previous    Next  AGI:  At5g40260.1    Description:  nodulin MtN3 family protein. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G10850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14785.1); contains InterPro domain MtN3 and saliva related transmembrane protein (InterPro:IPR004316) Range:  from: 16106986    to: 16108981    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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