Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------TOE2(3)                                                                             <---------TOE1(3)                                                                        --------------->AGL15                                                                        <---------------AGL15                                                   --------->YAB1       =============================                                                   <------ZmHOX2a(1)   ----------------->AGL1   <----------DOF2                               <---------TOE2(3)     ----------------->AG<---------TOE2(3) -------->ID1                   xxxxxxxxxxxxxxxx>smallRNA(i)           ----------------->AGL2 -----DOF2                     <-----------GT1   <---------TOE1(3)     ============================== ------------ANAC81       ---------->ID1  <-----------------AGL1       <-----------------AGL2   tgtttctttgtttcagtgttttttttttgtttttttcaaaactgaaccattaaggataaaccaaaatcacaaaaccattaagggtaaaccattaagtttc  16068700                                                    <-----------------AGL1                                              <--------P                                             <---------ANAC58                                             <---------ANAC58                                             <-------GAMYB                                            <---------MYB46(3)                                            <------MYB46(1)                                            <------MYB83                                           <---------AtMYB61                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    <---------ANAC46----------------->AGL1                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                  <---------ANAC46  ----------------->AGL2                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                xxxxxxxxxxxxxxxx>smallRNA(s)                                --------->ZAT14     <-----------------AGL2                                <---------ZAT14 <---------At4g35610                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            xxxxxxxxxxxxxxxx>smallRNA(s)                           xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         xxxxxxxxxxxxxxxx>smallRNA(s)--------------->AGL15                         xxxxxxxxxxxxxxxxx>smallRNA(fl3)                        xxxxxxxxxxxxxxxx>smallRNA(s)----------------->AGL3                      xxxxxxxxxxxxxxxx>smallRNA(s) <-----------------AGL1                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      -----                    xxxxxxxxxxxxxxxx>smallRNA(i)--------->At4g35610                         ---------                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              <----------ID1                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             ---------->DOF2                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          ------->GAMYB------                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------TOE1(3)       xxxxxxxxxxxxxxxxxxx                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------TOE2(3)     --------->At4g35610                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------------AGL15   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->MYB52(1)     ------------------------>ANAC81<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ====================================================================MADS_MADS <xxxxxxxxxxxxxxxxsmallRNA(i) ====================================================================MADS_MADS<xxxxxxxxxxxxxxxxxxxxxx   aaaacaaaaccagaaaaactaaaccgaaatcaagtgctgtgtgatttggttgctcccattaagggtattttagtctgaaaacaactgaaaagacaaacgg  16068800                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------ARR11(3)       --------->ARR14(2)       <---------ARR11(1)       <-----------ARR10  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------CCA1(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                          --------->LBD16      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                       --------->ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                         --------->ANAC46     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                         <---------ANAC55(2)    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                   --------->ANAC55(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <----------DOF2                        --------->AHL20(2) <-----------GT1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <---------AHL20(2)<---------GLK1(1) ---->At5g28300  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               --------->AHL20(2) --------->GLK1(1) >MYB52(1)    <----------DOF2  ------------>CBF                 <---------AHL20(2) --------->ANAC55(1) ----->GT1  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  <---------YAB1     --------->ANAC58 x>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <----------DOF2----------->TBP xsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)----------->GT1--------->AHL20(2)<---------LBD16   taaaaaccatatctcactttgacaaaccatgagagcaattcttttttcatccagtgaaaatttctttttattaaatctataaaatacggaaatcaaatct  16068900                                                   <---------ICU4                                                 <---------ARR11(3)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                 <-----------ARR10                                                ------>MYB83                                                ------>MYB46(1)                                                <---------CCA1(2)               <---------ANAC58         --------->YAB1                      <---------YAB1               <---------ANAC58   <---------MYB46(3)<----------DOF2      --------->AHL20(1)     -----           <----------DOF2        ----------->GT1<---------ARR11(1)     --------->AHL20(2)      -----        <-----------GT1    <---------ANAC58     <---------ARR14(1)  --------->AHL20(2)        -------       <-----------GT1<----------CDC5  <---------YAB1               ----------->TBP           <------      --------->GLK1(1)    <---------ANAC58 >>>>>>>>>MYB2     --------->REM1(1)   <-----------GT1   atactcgtatttccttttcttaccgatgagcgtgagtggttatgaaaaccaaatctttacttctacatctataaatatatgattttactctccaaaccta  16069000                                                                                               ------ --------->TOE2(3)    --------->AHL20(2)                                                       ------ ->MYB46(1)           <---------AHL20(2)                              --------->MYB52(1)       ------ ->MYB83             --------->AHL20(2)<---------ANAC58        ----------->GT1                ------- -->TOE2(3)     ------------>CBF       <---------ANAC58      ----------->GT1                --------- ---MYB59<-----------GT1     <<<<<<<<<TBF1  <----------DOF2 ------->TEIL              <--------------   atacattagtttcactctctcaattttattcttcttcgccttcgtgctttctcttaactttgaacgtgaaaaaaacagagagtttgtcttcgaaaccaac  16069100                           <-----------GT1                           ---------->ID1                       <----------DOF2                       <---------DAG2                   <-----------GT1                <---------ICU4                --------->YAB1  --------->At4g35610 <---------DAG2 -->P           <--------HAHB4 >MYB83        ======================HOX2a_HOX2a >MYB46(1)     <---------YAB1                                        ------->GAMYB             <----- ---->RAV1(1)  <------ZmHOX2a(2)           <-----------GT1        --------->MYB52(1)      ---------->DOF2 >MYB46(3)     --------->ICU4 ------>ZmHOX2a(1)      --------->HSFB2a(2)                --------->ANAC58 -------WRI1   <---------ATHB12       <---------YAB1 <---------HSFB2a(2)                --------->ANAC58   aagaagatgactatgcgatcattacctttttcctcttcttcttattcactcgcttccacaagtttgagtaacagacttgagactatattcaagaaagctt  16069200                                <-----------HVH21                               <---------ANAC58                               <---------ANAC58          --------->ARR11(3)                              <-------TEIL<---------LBD16<---------ARR11(3)                              --------->SPL7      --------->MYB52(1)      <---------ZAT18        --------->ALFIN1    ----------->HVH21                     --------->DAG2      --------->ZAT14      <---------ANAC58     <-----------RAV1(2)                   ---------->DOF2   <----------DOF2         <---------ANAC58<---------ANAC55(2)                  ---------->DOF2 ------HVH21               <---------ANAC46--------->ANAC55(2)               <------ZmHOX2a(1)   cagagctttgcactctctgtgatatcgaagcgtgcgtcatctattacggaccagacggagaacttaagacatggcctaaggagaaagagaaagtgagaga  16069300                                                 --------->TOE2(3)                                                ----------->GT1                    <---------AHL20(2)       --------->DAG2                    --------->AHL20(2)      ---------->DOF2                       >>>>>>>>>TBF1                 --------->WOX13(1)      --------->ANAC58           ------>ZmHOX2a(1)      >>>>>>>>>TBF1             ----------->GT1         --------->ANAC58               --------->LBD16  >>>>>>>>>TBF1        <---------ANAC46             --------->ANAC58  --------->YAB1          >>>>>>>>>TBF1       <---------TOE2(3)--------->ANAC46 --------->ANAC58         ----------------->AGL1>>>>>>>>>TBF1   cattgctctgaggtatagtcaattaaacgaagccttgagaagcaagaaaagcgttaatcttcatgggttcctgaacaagaagaagaagaagaagaagaag  16069400                                                                                       ------>NtERF2                                                                           --------->YAB1                                                                           <--------HAHB4                                                                           <---------ICU4                       <------ZmHOX2a(1)                     <-----------GT1  <-----------GT1                  --------->YAB1                             --------->ARR14(2)       <---------ETT(1)       --------->ARR14(2)                                    <---------ARR14(2)       --------->LBD16       <---------ARR14(2)                                <---------TOE2(3)<---------YAB1       --------->GLK1(2)                                ---------->DOF2   --------->ICU4   ggtttgaagaatccgaacaataagaggaagacttgtcttaagaagaacgtgaatgttttaaagtatccactcgctgatcattaccctcccgaccaagttt  16069500                                                                                                   <-                                                                                        <---------YAB1                                                                                        --------->At4g35610                                                                                      --------->YAB1              ------>ZmHOX2a(1)                                                      ================             --------->TOE2(3)                                                       <------ZmHOX2a(2)   ------->GAMYB---------->DOF2                                                     <---------ARR14(2)   ----------->HVH21                      ---------->DOF2                           --------->ARR14(2) ----------->RAV1(2)                    --------->ANAC58                           <---------ARR14(1) --------->At4g35610                    --------->ANAC58<---------ANAC58          --------->LBD16  -- <---------At4g35610                    --------->ANAC46<---------ANAC58        <---------LBD16  <---   ctcaactgactcagtccttaaaactccatgtctctaaattccaagaaaggcttcgatttcttgagtcgcagaaacagacaaaaccggatcatcagagttt  16069600  Previous    Next  AGI:  At5g40120.1    Description:  AGL76; DNA binding / transcription factor. similar to AGL75, DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G41200.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 16069107    to: 16070264    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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