Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ----------->HVH21                                                  =======================HOX2a_HOX2a                                                 <---------At4g35610                                                 ========================HOX2a_HOX2a                                                 --------->CCA1(2)                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)                                                <---------AGP1                         <---------GLK1(2)                                                <---------ARR14(2)                --------->MYB52(1)                                                --------->ARR14(2)              --------->ARR11(3)                        <-----------HVH21       <---------ARR11(3)      <---------GLK1(2)           --------->ANAC58                <---------ANAC46             <---------ARR14(3)           --------->ANAC58          --------->MYB59       ------>ZmHOX2a(2)  <---------TOE2(3)  <---           --------->ANAC46   --------->ANAC58  --------->AGP1          --------->ARR14(3)    -------           <----------ID1     --------->ANAC58----------->ARR10   ------>ZmHOX2a(1)    --------->ARR14(2) -------->LBD16      --------->CCA1(2) <-------GAMYB       ==============HOX2a_HOX2a   <---------ARR14(2) -------LBD16       <---------ARR11(3)<------MYB46(1) <---------WOX13(1)--------->ARR11(3)    <------ --->ZmHOX2a(2)     --------->ARR11(3)<------MYB83------>ZmHOX2a(2)     <---------ARR11(3)  ---------   tccggagtagaacacgacaagagatatgtcacgagcaatttggttgagtagatctgactgatccattcctgcaagattttgagataatggatactcagcg  16060300       <<<<<<<<<<WRKY38       <<<<<<<<<<WRKY43  <---------ARR14(2)     <------MYB83--------->MYB111(1)     <------MYB46(1) --------->ZAT14            --------->LBD16     ----------->GT1 <---------ZAT14    --------->ATERF1(1)    <---------AtMYB61<---------ZAT18    <------NtERF2    --------->MYB59  --------->ZAT18   <---------RAP2.3(1)   <--------P   <--------P             <---------ATERF1(1) ---NtERF2    <------MYB46(1)          ------>NtERF2 -->At4g35610 <------MYB83            <---------RAP2.6(2) ---At4g35610--------->MYB59         ---------->ID1                           ---------->DOF2 ->CDC5<<<<<<<<<<WRKY26  --------->ARR14(2)   <---------LBD16             --------->TOE2(3)   gcaaggttggtcaatttggtaagtgcagttctccaacttggcgccttctccggatgttgtctgcatatttcttccacattaaaagataaatctgtaagaa  16060400                                                                   --------->MYB52(1)                                                               --------->ANAC58                                                               --------->ANAC58                                                             <------ZmHOX2a(1)                             --------->LBD16              <---------HSFB2a(2)                     <---------DAG2                       <---------HSFC1(1)                   ------->TEIL                           --------->HSFB2a(2)     <---------ANAC58  -             --------->ATHB12------>ZmHOX2a(1)      --------->ARR11(3)            <---------ANAC46  -            <---------YAB1 ----------->RAV1(2)      <---------ARR11(3)------->GAMYB  <---------ANAC46      ----------->HVH21    <---------LBD16 --------->ZAT6 --------->HSFC1(1)      <---------ANAC58 --   aaatgggtatgaccatgagtgaacctttttcctgaaactcgagtatcactaagagctcttctaggaagccaacggagcaaggtttcgtcgtagaggtcat  16060500                                                        --------->ARR14(2)                                                        --------->GLK1(2)                                                        <---------ARR14(2)                                         <---------WRKY18(1)                                        ----------->HVH21              --------->GLK1(2)                                        --------->WRKY12------->TEIL--------->ANAC46      ------>NtERF2                     --------->WRKY38(1)         --------->ANAC58    --------->LBD16                     --------->WRKY45<---------ARR11(1)   ------->GAMYB                       <---------MYB52(1)           --------->ANAC58   --------->ANAC46                   <-------GAMYB     <-----------ARR10  --------->MYB46(3)                  <---------At4g35610       --------->HSFB2a(2)   --------->DAG2 -------->P                    <---------ANAC58        <---------CCA1(2)       ----------->GT1 -------->MYB55(1)             <---------ANAC58        <---------ARR14(1)      <------ZmHOX2a(1) ------>GAMYB   --------->HSFB2a(1)   --------->At4g35610       <---------HSFB2a(2)  ---------->DOF2 ------->MYB46(3)     ---------->DOF2<---------MYB46(3)<---------GLK1(2)--------->At4g35610   aacaaccgcgactctcgactcttccaaagccttgagtgtccgttgaccaattggtccgaatctcttctccaagcatctgtaggataaaaaagttctaatg  16060600                                                                              --------->ANAC46                                                                              --------->AtLEC2                                                <---------GLK1(2)             --------->ANAC58                                                <---------ARR14(2)    ------>MYB83                                                --------->ARR14(2)    ------>MYB46(1)                        --------->CCA1(1)   <------NtERF2           --------->DEAR3(1)       --------              <---------AHL20(1)            <---------ZAT2          --------->AtMYB61        <-------              --------->AHL20(1)            --------->ZAT2          <---------MYB111(2)     ---------              --------->ARR11(3)            <---------At4g35610    --------->ANAC46       --------->At4g35610            <---------AHL20(1)              --------->At4g35610  <---------ALFIN1----------->RAV1(1)            --------->AHL20(1)   <---------ANAC58       <------ZmHOX2a(1)     --------->ANAC58            <---------ARR11(3)   <---------ANAC58    <---------LBD16<---------ALFIN1   ---------->DOF2        --------->YAB1  --------->RVE1(1)  ----------->RAV1(1)  --------->MYB46(3)  ---------->DOF2   ccatttcgaatcaaaatattttgaaaatatccatggctagtctggcagcagaaactcaggaagacatccacctcccttccaagcaacaaagaagcagcag  16060700                                                                           ------->MYC3                         <---------MYB46(3)                                <-------MYC3             -                         ----------->GT1       --------->At4g35610      <---------ALFIN1            -                      <----------DOF2          <---------At4g35610 --------->ANAC58                 -                     <---------ANAC58          <---------ZAT2      --------->ANAC58               <--        --------->At4g35610                    ----------->RAV1(2)--------->DAG2              <------ ->At4g35610         <---------ANAC58          --------->ZAT2    ---------->DOF2              ------- --At4g35610   --------->ARR11(3)           <---------At4g35610------->GAMYB           <----------DOF2 -->RAV1(1)--------->At4g35610    --------->ZAT6            --------->MYB52(1)----------->HVH21------   aagatgaagaagcagaagacattgctttggttaaaaacactaattctgcagctggactcgaacaacgaaaagctacacatgtgaaacagctttacaacaa  16060800                                                                                                 <---       --------->YAB1                                                                       ---------   <---------ALFIN1                                                             ----------->TBP  ---- -------->ANAC58                                                                <---------AHL20(2) -------->ANAC46                                                             --------->AHL20(1)  ---- -------->ANAC58                                                             <---------AHL20(1) ----- -------ALFIN1                                        <----------ID1        --------->AHL20(2)  <---- ---MYB52(2)                                 --------->ANAC58   <---------DAG2----------->TBP   <---- -->MYB46(3)      --------->ZAT6             --------->ANAC58   <----------DOF2 --------->AHL20(2) <- ->GAMYB ----------->TBP       ----------->GT1      ---------->DOF2 <---------ANAC46--------->AHL20(2)   acacaccacttataaaaaaaacactagtagctaatgtgaaaacaaacaagacaaaaaagacaaaaactttacgtagaaatatataaataaacagagcaat  16060900                                    --------->WOX13(1) -----ATHB1                      --------->ARR11(3) --->CBF                        --------->GLK1(1) ----->YAB1                    <---------ARR11(3)                  <------MYB83 ----->ATHB12                  --------->ARR11(3)--------->At4g35610                    <-----------GT1 ---->ICU4           <---------ARR11(3)   <---------ICU4           ----------->GT1  <---------AHL20(2) -----ATHB12         --------->ARR11(3)--------->YAB1              <------MYB46(1)<---------AHL20(2) -----YAB1     <---------AHL20(2)<---------ARR11(3)    ---------->DOF2      <----------DOF2 --------WOX13(1)---------->DOF2<---------GLK1(1)<---------At4g35610    --------->KAN4(2) -----------   gatagatttcaaagtatttaaaagttcttaatagatatctatcaaaatgacagcatacaaagtagcatttggtttattctttatatttttttgccgaaca  16061000                   --------->ANAC58                                                           -------                   --------->ANAC58     <---------WOX13(1)                                  ---------                   --------->ANAC46 <---------WOX13(1)                                  <---------TOE2(3)             --------->At4g35610   <---------ANAC58                                    ---------->DOF2          <---------At5g28300      <---------ANAC58           <---------ANAC58      --------->TOE2(3)         <-----------GT1           <---------ANAC46           <---------ANAC58    ------>MYB83-------        <-------TEIL         <---------ALFIN1              <-----------GT1        ------>MYB46(1)      <---------GLK1(2)   <---------ARR11(3) <---------AHL20(2)                  ----------->RAV1(1) ---->AtSPL3 --------->ZAT14------>ZmHOX2a(2)--------->AHL20(2)                --------->MYB46(3)   aaatcaaagattcactgctccaagacatgatccacttgcttgatagattaatttcttatattttccttgtttatgcatcaaaccaacattaaagaaacga  16061100                                <---------ATHB12                    <----------DOF2                  <----------DOF2                                 <---------YAB1               ------                 ------>ZmHOX2a(2)--------->ARR11(3)             --------->ARR14(2)          <-------                 ==============HOX2a_HOX2a                       <---------ARR14(2)       <---------ARR11(3)      <---------CCA1(2) <------ZmHOX2a(1)                        --------->ARR11(3)       --------->ARR11(3) -->ANAC58     <---------ARR11(3) <---------ARR11(3)             <---------ARR11(3)--------->ANAC58 >MYB52(1)     --------->ARR11(3)--------->YAB1          *TSS   <---------ARR14(1) --------->ANAC58 -->ANAC58<----------DOF2--------->ARR14(2)         <-------GAMYB--------->GLK1(2) --------->ANAC46   catctctcttatcttttgatctttcaggattcaaatgatcatcttgaaacagagcgttgaaacagagtatctttgagcctcttctaagccaaggtctttg  16061200  Previous    Next  AGI:  At5g40090.1    Description:  ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor. similar to disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT1G17610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain NB-ARC; (InterPro:IPR002182) Range:  from: 16059147    to: 16060722    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g40100.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G72840.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G17600.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G48770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro: Range:  from: 16061157    to: 16064583    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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